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DBNDD2
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  • DBNDD2
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1567.7 nTPM
HPA Brain:715.4 nTPM
GTEx:1567.7 nTPM
FANTOM5:386.8 Scaled Tags Per Million
Pig:127.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

715.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 563.7
1981 Female, age 72, midline 754.5
2194 Female, age 79, both hemispheres 559.1
2048 Male, age 55, midline 544.0
2816 Male, age 47, midline 515.5
2565 Male, age 75, midline 445.3
Cervical spinal cord, dorsal horn
nTPM: 715.4
2296 Male, age 66, both hemispheres 1135.7
2173 Female, age 72, unknown 1088.2
2069 Male, age 47, both hemispheres 711.8
1877 Male, age 55, unknown 580.6
2297 Male, age 75, both hemispheres 406.8
2721 Male, age 90, both hemispheres 369.2
Cervical spinal cord, ventral horn
nTPM: 645.4
2068 Male, age 55, unknown 733.3
2098 Female, age 72, unknown 724.9
2480 Male, age 75, both hemispheres 617.7
2809 Male, age 90, both hemispheres 613.4
2820 Female, age 79, both hemispheres 604.7
2295 Male, age 66, both hemispheres 578.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1567.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1567.7
Samples: 204

Max nTPM: 2776.2
Min nTPM: 405.4
Std nTPM: 510.5
Median nTPM: 1553.7
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 2776.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 2729.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2676.5
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 2650.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 2585.6
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 2519.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2444.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 2443.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 2438.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2431.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 2392.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 2389.9
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 2354.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2353.0
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 2339.4
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 2336.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 2323.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 2320.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 2315.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 2244.7
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 2233.8
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 2228.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 2191.0
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 2176.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 2175.8
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 2170.7
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 2164.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 2159.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 2148.8
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 2148.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2141.8
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 2139.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 2118.3
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 2102.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2096.4
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 2089.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2088.5
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 2064.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 2061.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 2029.3
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 2026.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 2013.1
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 2010.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1987.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1977.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1975.8
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 1965.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1937.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1933.0
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 1927.3
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1925.6
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1920.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1914.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1909.2
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 1890.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1889.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 1884.2
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 1876.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1875.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1874.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1858.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1845.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1828.4
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1803.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1796.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1786.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1783.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1776.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1768.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1765.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1754.9
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 1751.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1751.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1749.9
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 1739.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1737.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1734.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1718.7
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 1715.9
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1709.5
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1699.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1687.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1678.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1678.4
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 1668.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1668.7
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 1662.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1652.2
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 1651.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1650.6
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 1647.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1638.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1634.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1631.0
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 1612.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1606.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1598.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1598.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1586.6
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 1572.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1570.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1558.0
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 1549.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1547.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1546.0
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 1542.9
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 1538.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1530.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1527.1
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1524.6
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 1520.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1516.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1490.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1490.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1487.5
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 1478.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1458.7
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 1456.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1455.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1454.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1449.0
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1439.8
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 1433.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1427.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1426.5
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 1426.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1410.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1405.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1400.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1399.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1381.7
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 1379.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1368.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1364.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1357.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1350.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1349.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1342.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1341.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1334.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1323.5
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1320.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1317.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1316.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1308.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1302.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1291.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1287.4
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 1285.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1282.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1277.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1274.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1248.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1244.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1228.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1228.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1216.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1214.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1181.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1165.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1163.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1156.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1151.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1142.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1127.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1123.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1106.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1094.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1086.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1069.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1052.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1019.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 996.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 994.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 977.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 962.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 959.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 955.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 943.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 930.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 928.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 915.8
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 884.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 879.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 872.8
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 868.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 858.5
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 825.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 763.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 725.6
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 689.8
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 668.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 659.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 650.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 623.7
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 620.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 606.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 605.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 579.5
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 572.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 565.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 528.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 441.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 405.4
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

386.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 386.8
FF:10181-103D1 60 years, female 466.7
FF:10159-103A6 76 years, female 306.8

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 100.2
Samples: 4

Max nTPM: 113.8
Min nTPM: 81.3
Sample A Female 113.8
Sample B Female 97.5
Sample C Male 81.3
Sample D Male 108.3
Ventral spinal cord
nTPM: 127.5
Samples: 4

Max nTPM: 154.2
Min nTPM: 103.6
Sample A Female 130.3
Sample B Female 121.8
Sample C Male 103.6
Sample D Male 154.2

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