HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:23.4 nTPM
HPA Brain:32.8 nTPM
GTEx:23.4 nTPM
FANTOM5:74.7 Scaled Tags Per Million
Pig:121.2 nTPM
Mouse:43.2 nTPM
Allen mouse:0.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036640
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 32.8
Sample id Sample description nTPM
Hippocampus
nTPM: 28.5
1911 Female, age 85, right hemisphere 31.8
1898 Male, age 80, left hemisphere 28.9
2148 Female, age 91, left hemisphere 28.6
2621 Female, age 67, right hemisphere 28.5
1855 Male, age 76, left hemisphere 27.8
2529 Female, age 94, left hemisphere 25.6
Dentate gyrus
nTPM: 28.1
2530 Female, age 94, left hemisphere 34.3
2528 Male, age 74, both hemispheres 29.6
2010 Male, age 76, both hemispheres 28.6
2246 Female, age 85, both hemispheres 27.4
1927 Female, age 91, both hemispheres 27.1
2531 Female, age 67, both hemispheres 21.8
Entorhinal gyrus
nTPM: 31.6
2117 Female, age 91, right hemisphere 36.3
1787 Male, age 76, left hemisphere 33.9
2764 Male, age 80, right hemisphere 32.4
1938 Female, age 85, left hemisphere 31.1
2613 Female, age 94, left hemisphere 29.7
2686 Male, age 75, right hemisphere 26.3
Hippocampus, CA1
nTPM: 28.8
2527 Male, age 74, both hemispheres 33.2
2082 Female, age 91, right hemisphere 30.5
2749 Male, age 80, left hemisphere 27.5
2045 Male, age 76, both hemispheres 26.7
1873 Female, age 85, both hemispheres 26.0
Hippocampus, CA2
nTPM: 28.7
2249 Male, age 74, both hemispheres 33.1
1940 Female, age 85, left hemisphere 31.8
2113 Female, age 91, right hemisphere 28.9
2437 Female, age 94, left hemisphere 28.0
1892 Male, age 76, both hemispheres 26.0
1963 Male, age 80, left hemisphere 24.2
Hippocampus, CA3
nTPM: 28.8
2436 Male, age 74, both hemispheres 34.5
1891 Female, age 85, both hemispheres 31.8
2620 Female, age 94, left hemisphere 29.9
1867 Male, age 76, both hemispheres 26.1
2861 Female, age 67, both hemispheres 25.5
2137 Male, age 80, left hemisphere 24.7
Parahippocampal cortex
nTPM: 29.6
2250 Female, age 67, right hemisphere 33.6
1990 Female, age 91, right hemisphere 31.7
2018 Male, age 76, both hemispheres 29.7
2692 Male, age 74, both hemispheres 29.6
1933 Female, age 85, both hemispheres 29.5
2622 Female, age 67, right hemisphere 29.1
1850 Male, age 80, both hemispheres 28.7
2693 Female, age 94, both hemispheres 28.6
2245 Female, age 91, both hemispheres 27.9
2532 Female, age 72, left hemisphere 27.3
Perirhinal gyrus
nTPM: 28.4
1794 Male, age 80, right hemisphere 32.2
1847 Female, age 91, left hemisphere 31.1
2848 Male, age 76, right hemisphere 27.3
1841 Female, age 85, right hemisphere 27.0
2521 Female, age 94, right hemisphere 24.6
Subiculum
nTPM: 32.8
2042 Male, age 76, both hemispheres 35.1
1977 Female, age 85, both hemispheres 34.0
2438 Female, age 94, left hemisphere 33.3
2619 Male, age 74, both hemispheres 31.6
1901 Male, age 80, both hemispheres 31.3
2729 Female, age 91, right hemisphere 31.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 23.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.4
Samples: 255

Max nTPM: 46.7
Min nTPM: 10.7
Std nTPM: 5.7
Median nTPM: 22.4
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 46.7
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 44.1
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 41.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 40.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 37.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.9
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 36.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 36.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 35.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 35.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 74.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.7
FF:10169-103B7 60 years, female 81.0
FF:10153-102I9 76 years, female 68.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 121.2
Pig sample Sample description nTPM
Subiculum
nTPM: 58.0
Samples: 4

Max nTPM: 68.6
Min nTPM: 49.2
Sample A Female 68.6
Sample B Female 63.8
Sample C Male 50.3
Sample D Male 49.2
Dorsal hippocampus
nTPM: 121.2
Samples: 4

Max nTPM: 151.2
Min nTPM: 70.7
Sample A Female 151.2
Sample B Female 143.3
Sample C Male 70.7
Sample D Male 119.6
Entorhinal cortex
nTPM: 73.0
Samples: 4

Max nTPM: 103.3
Min nTPM: 60.2
Sample A Female 60.2
Sample B Female 103.3
Sample C Male 66.0
Sample D Male 62.3
Ventral hippocampus
nTPM: 111.4
Samples: 4

Max nTPM: 125.4
Min nTPM: 91.6
Sample A Female 125.4
Sample B Female 91.6
Sample C Male 112.1
Sample D Male 116.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 43.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.5
Samples: 4

Max nTPM: 42.1
Min nTPM: 35.2
Sample A Male 40.0
Sample B Male 35.2
Sample C Female 42.1
Sample D Female 40.5
Hippocampal formation
nTPM: 43.3
Samples: 4

Max nTPM: 49.5
Min nTPM: 39.3
Sample A Male 40.8
Sample B Male 39.3
Sample C Female 43.4
Sample D Female 49.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68443080 Antisense, RP_050111_01_C12, Mouse strain C57BL/6J (56 days, male) 0.3

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