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  • TISSUE

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  • RBM8A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:40.3 nTPM
HPA Brain:57.8 nTPM
GTEx:40.3 nTPM
Pig:29.7 nTPM
Mouse:39.7 nTPM
Allen mouse:2.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 53.4
1961 Female, age 42, unknown 54.1
2226 Male, age 75, left hemisphere 52.6
Dorsomedial nucleus
nTPM: 46.5
2041 Female, age 72, unknown 53.6
2017 Female, age 42, unknown 47.4
1989 Male, age 62, unknown 38.5
Lateral hypothalamic area
nTPM: 50.3
1791 Male, age 80, right hemisphere 56.3
2228 Male, age 66, unknown 50.4
2271 Male, age 75, both hemispheres 47.9
2412 Male, age 62, unknown 46.7
Mammillary body
nTPM: 49.2
1923 Female, age 72, unknown 51.0
1948 Female, age 72, unknown 49.9
1945 Male, age 80, right hemisphere 49.7
1834 Female, age 42, unknown 49.3
2413 Male, age 66, unknown 46.0
Paraventricular nucleus
nTPM: 56.0
2700 Male, age 62, unknown 56.0
Preoptic area
nTPM: 50.5
1861 Female, age 42, unknown 51.6
2414 Female, age 72, unknown 50.6
1907 Male, age 80, right hemisphere 49.3
Supraoptic nucleus
nTPM: 57.8
1894 Female, age 72, unknown 61.3
2043 Male, age 62, unknown 59.5
2835 Female, age 72, unknown 52.6
Ventromedial nucleus
nTPM: 52.5
1982 Female, age 72, unknown 53.8
1822 Female, age 42, unknown 51.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 40.3
Samples: 257

Max nTPM: 74.9
Min nTPM: 25.7
Std nTPM: 8.0
Median nTPM: 39.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 74.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 73.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 73.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 68.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 64.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 61.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 60.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 60.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 56.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 55.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 54.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 54.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 54.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 54.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 53.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 53.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 53.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 52.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 52.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 51.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 51.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 51.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 51.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 50.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 50.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 50.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 50.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 49.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 49.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 49.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 49.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 49.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 49.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 49.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 48.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 48.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 48.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 48.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 47.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 47.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 47.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 47.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 47.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 46.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 46.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 46.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 46.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 46.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 46.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 46.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 46.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 46.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 46.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 45.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 45.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 45.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 45.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 45.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 44.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 44.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 44.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 44.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 44.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 44.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 44.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 44.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 44.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 44.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 44.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 44.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 44.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 43.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 43.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 43.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 43.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 43.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 43.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 43.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 43.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 42.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 42.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 42.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 42.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 42.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 42.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 42.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 42.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 42.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 42.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 41.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 41.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 41.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 41.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 41.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 41.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 41.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 41.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 41.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 41.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 41.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 41.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 41.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 40.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 40.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 40.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 40.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 40.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 40.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 40.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 40.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 40.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 40.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 40.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 40.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 40.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 39.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 39.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 39.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 39.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 39.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 39.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 39.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 39.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 39.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 39.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 39.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 39.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 39.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 39.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 39.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 38.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 38.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 38.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 38.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 38.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 38.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 38.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 38.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 38.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 38.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 37.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 37.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 37.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 37.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 37.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 37.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 37.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 37.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 37.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 37.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 37.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 37.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 37.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 37.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 37.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 36.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 36.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 36.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 36.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 36.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 36.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 36.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 36.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 36.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 36.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 36.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 36.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 36.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 36.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 36.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 36.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 36.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 36.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 36.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 35.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 35.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 35.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 35.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 35.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 35.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 35.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 35.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 35.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 35.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 35.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 35.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 34.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 34.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 34.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 34.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 34.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 34.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 34.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 34.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 34.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 34.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 34.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 34.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 34.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 34.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 34.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 33.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 33.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 33.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 33.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 33.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 33.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 33.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 33.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 33.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 33.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 33.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 33.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 33.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 33.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 32.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 32.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 32.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 32.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 32.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 32.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 32.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 32.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 32.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 32.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 32.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 32.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 32.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 32.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 32.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 31.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 31.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 31.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 31.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 31.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 31.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 31.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 31.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 31.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 30.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 30.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 30.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 30.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 30.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 30.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 29.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 29.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 29.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 29.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 29.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 28.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 28.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 28.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 27.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 26.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 25.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 29.7
Samples: 4

Max nTPM: 38.7
Min nTPM: 21.6
Sample A Female 38.7
Sample B Female 28.4
Sample C Male 30.0
Sample D Male 21.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 39.7
Samples: 4

Max nTPM: 41.7
Min nTPM: 37.5
Sample A Male 37.5
Sample B Male 40.7
Sample C Female 38.9
Sample D Female 41.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.2
68844379 Antisense, RP_050222_01_E04, Mouse strain C57BL/6J (56 days, male) 2.2

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