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  • TISSUE

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  • TAF15
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:59.2 nTPM
HPA Brain:34.9 nTPM
GTEx:59.2 nTPM
Pig:42.5 nTPM
Mouse:28.9 nTPM
Allen mouse:7.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 5.8
1961 Female, age 42, unknown 10.3
2226 Male, age 75, left hemisphere 1.3
Dorsomedial nucleus
nTPM: 6.8
1989 Male, age 62, unknown 18.3
2017 Female, age 42, unknown 1.3
2041 Female, age 72, unknown 0.8
Lateral hypothalamic area
nTPM: 10.4
2412 Male, age 62, unknown 20.3
2271 Male, age 75, both hemispheres 11.0
1791 Male, age 80, right hemisphere 7.3
2228 Male, age 66, unknown 3.1
Mammillary body
nTPM: 5.7
1834 Female, age 42, unknown 11.6
2413 Male, age 66, unknown 7.6
1948 Female, age 72, unknown 5.1
1923 Female, age 72, unknown 2.9
1945 Male, age 80, right hemisphere 1.5
Paraventricular nucleus
nTPM: 34.9
2700 Male, age 62, unknown 34.9
Preoptic area
nTPM: 15.3
1861 Female, age 42, unknown 24.8
2414 Female, age 72, unknown 14.4
1907 Male, age 80, right hemisphere 6.8
Supraoptic nucleus
nTPM: 16.8
2835 Female, age 72, unknown 28.6
1894 Female, age 72, unknown 12.7
2043 Male, age 62, unknown 9.2
Ventromedial nucleus
nTPM: 11.1
1822 Female, age 42, unknown 13.1
1982 Female, age 72, unknown 9.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 59.2
Samples: 257

Max nTPM: 126.5
Min nTPM: 19.7
Std nTPM: 13.6
Median nTPM: 57.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 126.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 110.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 105.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 102.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 98.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 98.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 95.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 93.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 91.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 91.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 89.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 89.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 87.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 84.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 81.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 81.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 81.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 80.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 79.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 78.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 78.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 77.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 76.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 76.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 76.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 76.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 75.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 73.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 73.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 73.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 73.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 73.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 72.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 72.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 72.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 72.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 72.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 72.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 72.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 71.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 71.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 70.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 69.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 69.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 69.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 68.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 68.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 67.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 67.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 66.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 66.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 66.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 66.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 66.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 66.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 66.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 66.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 66.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 66.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 65.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 65.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 65.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 65.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 64.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 64.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 64.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 64.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 64.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 64.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 64.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 63.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 63.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 63.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 63.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 63.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 63.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 63.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 63.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 63.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 63.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 63.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 62.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 62.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 62.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 62.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 62.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 62.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 61.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 61.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 61.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 61.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 61.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 60.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 60.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 60.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 60.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 60.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 60.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 60.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 60.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 60.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 59.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 59.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 59.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 59.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 59.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 59.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 59.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 59.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 59.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 58.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 58.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 58.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 58.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 58.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 58.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 58.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 58.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 58.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 58.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 58.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 58.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 58.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 57.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 57.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 57.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 57.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 57.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 57.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 57.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 57.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 57.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 56.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 56.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 56.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 56.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 56.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 56.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 56.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 55.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 55.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 55.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 55.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 55.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 55.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 55.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 55.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 55.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 55.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 54.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 54.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 54.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 54.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 54.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 54.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 54.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 54.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 54.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 53.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 53.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 53.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 53.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 53.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 53.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 53.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 53.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 53.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 53.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 53.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 53.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 53.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 53.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 52.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 52.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 52.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 52.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 52.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 52.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 51.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 51.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 51.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 51.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 50.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 50.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 50.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 50.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 50.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 50.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 50.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 49.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 49.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 49.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 49.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 49.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 49.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 49.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 49.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 49.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 49.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 49.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 49.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 49.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 49.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 49.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 49.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 49.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 48.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 48.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 48.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 48.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 48.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 48.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 48.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 48.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 48.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 48.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 47.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 47.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 47.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 47.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 47.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 47.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 47.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 47.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 47.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 47.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 46.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 46.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 46.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 46.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 46.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 46.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 45.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 45.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 45.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 44.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 44.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 44.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 43.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 43.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 43.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 43.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 43.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 43.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 42.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 42.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 42.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 42.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 41.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 41.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 41.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 41.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 39.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 36.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 32.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 26.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 19.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 42.5
Samples: 4

Max nTPM: 45.0
Min nTPM: 39.7
Sample A Female 45.0
Sample B Female 41.3
Sample C Male 44.0
Sample D Male 39.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 28.9
Samples: 4

Max nTPM: 30.4
Min nTPM: 26.2
Sample A Male 28.9
Sample B Male 26.2
Sample C Female 30.4
Sample D Female 30.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.1
69980154 Antisense, RP_050512_04_A03, Mouse strain C57BL/6J (56 days, male) 7.1

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