Single nuclei brain data

Brain regions

Data overview for the regional single nuclei data, based on Siletti K et al. (2023), representing 11 brain regions, divided by neuronal and non-neuronal cell types, clustered and named independently.

Download: rna_single_nuclei_brain_datasets.tsv.zip | 22 lines
Brain region	Technique	Data source	Cell count	Total read count
amygdala, neurons	Single nuclei	Siletti. K, et al.	153861	3504387660
amygdala, non-neuronal	Single nuclei	Siletti. K, et al.	32978	272902191
basal ganglia, neurons	Single nuclei	Siletti. K, et al.	187791	4056544662
basal ganglia, non-neuronal	Single nuclei	Siletti. K, et al.	106076	449261731
cerebellum, neurons	Single nuclei	Siletti. K, et al.	102515	562344347
cerebellum, non-neuronal	Single nuclei	Siletti. K, et al.	49295	237693259
cerebral cortex, neurons	Single nuclei	Siletti. K, et al.	499752	10342281274
cerebral cortex, non-neuronal	Single nuclei	Siletti. K, et al.	161532	706516318
hippocampal formation, neurons	Single nuclei	Siletti. K, et al.	237251	5940781467
hippocampal formation, non-neuronal	Single nuclei	Siletti. K, et al.	110148	509921704
hypothalamus, neurons	Single nuclei	Siletti. K, et al.	108065	2387696768
hypothalamus, non-neuronal	Single nuclei	Siletti. K, et al.	24359	131947511
medulla oblongata, neurons	Single nuclei	Siletti. K, et al.	46593	528460983
medulla oblongata, non-neuronal	Single nuclei	Siletti. K, et al.	38289	127190082
midbrain, neurons	Single nuclei	Siletti. K, et al.	126710	1887757311
midbrain, non-neuronal	Single nuclei	Siletti. K, et al.	121894	657676827
pons, neurons	Single nuclei	Siletti. K, et al.	105766	1819244051
pons, non-neuronal	Single nuclei	Siletti. K, et al.	97541	386302441
spinal cord, neurons	Single nuclei	Siletti. K, et al.	5757	69188812
spinal cord, non-neuronal	Single nuclei	Siletti. K, et al.	18353	70304254
thalamus, neurons	Single nuclei	Siletti. K, et al.	209632	5222903498
thalamus, non-neuronal	Single nuclei	Siletti. K, et al.	130768	497806547

Cell type data

Transcript expression levels summarized per gene in 48 cell types from 11 brain regions. The tab-separated file includes Ensembl gene identifier ("Gene"), gene name ("Gene name"), analysed sample ("Cell type") and normalized expression ("nCPM").

rna_single_nuclei_cell_type.tsv.zip

Cell types

Download: rna_single_nuclei_cell_type_cell_types.tsv.zip | 48 lines
Cell type	Cell type class
astrocytes	glial cells
bergmann glia	glial cells
brainstem vglut2+ excitatory	neuronal cells
ca1-3 excitatory	neuronal cells
ca4 excitatory	neuronal cells
cerebellar granular cells	neuronal cells
cerebellar purkinje cells	neuronal cells
cge derived interneurons	neuronal cells
cholinergic	neuronal cells
choroid plexus epithelial cells	ciliated cells
dentate gyrus excitatory	neuronal cells
dopaminergic	neuronal cells
ependymal cells	ciliated cells
fibroblasts	mesenchymal cells
forebrain excitatory	neuronal cells
forebrain projection neurons	neuronal cells
hypothalamic vglut2+ neurons	neuronal cells
lamp5+ glycinergic inhibitory	neuronal cells
lower rhombic lip-derived neurons	neuronal cells
lymphocytes	blood and immune cells
macrophages & monocytes	blood and immune cells
medium spiny neurons (msn)	neuronal cells
mge derived interneuron	neuronal cells
microglia	glial cells
midbrain derived inhibitory neurons	neuronal cells
midbrain–hindbrain inhibitory neurons	neuronal cells
monoaminergic	neuronal cells
msn-like neurons	neuronal cells
neurosecretory	neuronal cells
noradrenergic	neuronal cells
oligodendrocyte progenitor cells	glial cells
oligodendrocytes	glial cells
orexinergic	neuronal cells
other excitatory neurons	neuronal cells
other inhibitory	neuronal cells
other neuron	neuronal cells
pericytes	endothelial and mural cells
pvalb+ excitatory neurons	neuronal cells
schwann cells	glial cells
serotonergic	neuronal cells
spinal peptidergic excitatory neurons	neuronal cells
subcortical vglut2+ excitatory	neuronal cells
tfap2b+ inhibitory	neuronal cells
thalamic projection neurons	neuronal cells
upper rhombic lip-derived neurons	neuronal cells
vascular endothelial cells	endothelial and mural cells
vascular smooth muscle cells	endothelial and mural cells
vglut3 neuron	neuronal cells

Cell type group data

Transcript expression levels summarized per gene in 19 cell type groups from 11 brain regions. The tab-separated file includes Ensembl gene identifier ("Gene"), gene name ("Gene name"), analysed sample ("Cell type group") and normalized expression ("nCPM").

rna_single_nuclei_cell_type_group.tsv.zip

Cell type groups

Download: rna_single_nuclei_cell_type_group_cell_type_groups.tsv.zip | 19 lines
Cell type group	Cell type class
astrocytes	glial cells
bergmann glia	glial cells
choroid plexus epithelial cells	ciliated cells
ependymal cells	ciliated cells
excitatory	neuronal cells
fibroblasts	mesenchymal cells
inhibitory	neuronal cells
lymphocytes	blood and immune cells
macrophages & monocytes	blood and immune cells
microglia	glial cells
neurosecretory	neuronal cells
oligodendrocyte progenitor cells	glial cells
oligodendrocytes	glial cells
other neuron	neuronal cells
pericytes	endothelial and mural cells
schwann cells	glial cells
specialized neurotransmitter neurons	neuronal cells
vascular endothelial cells	endothelial and mural cells
vascular smooth muscle cells	endothelial and mural cells

Neuronal cell type data

Transcript expression levels summarized per gene in 34 neuronal cell types from 11 brain regions. The tab-separated file includes Ensembl gene identifier ("Gene"), gene name ("Gene name"), analysed sample ("Cell type") and normalized expression ("nCPM").

rna_single_nuclei_neuron_cell_type.tsv.zip

Neuronal cell types

Download: rna_single_nuclei_neuron_cell_type_cell_types.tsv.zip | 34 lines
Cell type	Cell type class
brainstem vglut2+ excitatory	neuronal cells
ca1-3 excitatory	neuronal cells
ca4 excitatory	neuronal cells
cerebellar granular cells	neuronal cells
cerebellar purkinje cells	neuronal cells
cge derived interneurons	neuronal cells
cholinergic	neuronal cells
dentate gyrus excitatory	neuronal cells
dopaminergic	neuronal cells
forebrain excitatory	neuronal cells
forebrain projection neurons	neuronal cells
hypothalamic vglut2+ neurons	neuronal cells
lamp5+ glycinergic inhibitory	neuronal cells
lower rhombic lip-derived neurons	neuronal cells
medium spiny neurons (msn)	neuronal cells
mge derived interneuron	neuronal cells
midbrain derived inhibitory neurons	neuronal cells
midbrain–hindbrain inhibitory neurons	neuronal cells
monoaminergic	neuronal cells
msn-like neurons	neuronal cells
neurosecretory	neuronal cells
noradrenergic	neuronal cells
orexinergic	neuronal cells
other excitatory neurons	neuronal cells
other inhibitory	neuronal cells
other neuron	neuronal cells
pvalb+ excitatory neurons	neuronal cells
serotonergic	neuronal cells
spinal peptidergic excitatory neurons	neuronal cells
subcortical vglut2+ excitatory	neuronal cells
tfap2b+ inhibitory	neuronal cells
thalamic projection neurons	neuronal cells
upper rhombic lip-derived neurons	neuronal cells
vglut3 neuron	neuronal cells

Cluster data

Transcript expression levels summarized per gene and cluster in 832 clusters. The tab-separated file includes Ensembl gene identifier ("Gene"), gene name ("Gene name"), brain region ("Brain region"), cluster ("Cluster"), analysed sample ("Cell type"), read count ("Read count") and normalized expression ("nCPM").

rna_single_nuclei_brain_cluster.tsv.zip

Download: rna_single_nuclei_brain_clusters.tsv.zip | 832 lines
Brain region	Cluster	Cell type	Cell type class	Cell count	Included in aggregation
amygdala, neurons	c-1	msn-like neurons	neuronal cells	10029	Yes
amygdala, neurons	c-2	forebrain projection neurons	neuronal cells	8310	Yes
amygdala, neurons	c-3	cge derived interneurons	neuronal cells	8122	Yes
amygdala, neurons	c-4	forebrain projection neurons	neuronal cells	7821	Yes
amygdala, neurons	c-5	forebrain excitatory	neuronal cells	7780	Yes
amygdala, neurons	c-6	cge derived interneurons	neuronal cells	7063	Yes
amygdala, neurons	c-7	forebrain excitatory	neuronal cells	6601	Yes
amygdala, neurons	c-8	forebrain excitatory	neuronal cells	5683	Yes
amygdala, neurons	c-9	forebrain projection neurons	neuronal cells	4680	Yes
amygdala, neurons	c-10	forebrain excitatory	neuronal cells	4612	Yes
amygdala, neurons	c-11	other inhibitory	neuronal cells	4330	Yes
amygdala, neurons	c-12	mge derived interneuron	neuronal cells	4235	Yes
amygdala, neurons	c-13	subcortical vglut2+ excitatory	neuronal cells	4077	Yes
amygdala, neurons	c-14	mge derived interneuron	neuronal cells	3702	Yes
amygdala, neurons	c-15	mge derived interneuron	neuronal cells	3608	Yes
amygdala, neurons	c-16	forebrain projection neurons	neuronal cells	3567	Yes
amygdala, neurons	c-17	msn-like neurons	neuronal cells	3250	Yes
amygdala, neurons	c-18	forebrain projection neurons	neuronal cells	3210	Yes
amygdala, neurons	c-19	cge derived interneurons	neuronal cells	3149	Yes
amygdala, neurons	c-20	forebrain excitatory	neuronal cells	3140	Yes
amygdala, neurons	c-21	forebrain excitatory	neuronal cells	2957	Yes
amygdala, neurons	c-22	forebrain projection neurons	neuronal cells	2901	Yes
amygdala, neurons	c-23	unassigned	mixed cell types	2850	No
amygdala, neurons	c-24	medium spiny neurons (msn)	neuronal cells	2837	Yes
amygdala, neurons	c-25	forebrain excitatory	neuronal cells	2836	Yes
amygdala, neurons	c-26	cge derived interneurons	neuronal cells	2752	Yes
amygdala, neurons	c-27	mge derived interneuron	neuronal cells	2688	Yes
amygdala, neurons	c-28	forebrain projection neurons	neuronal cells	2616	Yes
amygdala, neurons	c-29	mge derived interneuron	neuronal cells	2551	Yes
amygdala, neurons	c-30	forebrain excitatory	neuronal cells	2503	Yes
amygdala, neurons	c-31	forebrain projection neurons	neuronal cells	2497	Yes
amygdala, neurons	c-32	forebrain excitatory	neuronal cells	2196	Yes
amygdala, neurons	c-33	medium spiny neurons (msn)	neuronal cells	1961	Yes
amygdala, neurons	c-34	forebrain projection neurons	neuronal cells	1645	Yes
amygdala, neurons	c-35	forebrain excitatory	neuronal cells	1448	Yes
amygdala, neurons	c-36	msn-like neurons	neuronal cells	1385	Yes
amygdala, neurons	c-37	forebrain excitatory	neuronal cells	1112	Yes
amygdala, neurons	c-38	forebrain projection neurons	neuronal cells	1096	Yes
amygdala, neurons	c-39	forebrain projection neurons	neuronal cells	1054	Yes
amygdala, neurons	c-40	forebrain projection neurons	neuronal cells	889	Yes
amygdala, neurons	c-41	mge derived interneuron	neuronal cells	841	Yes
amygdala, neurons	c-42	mge derived interneuron	neuronal cells	784	Yes
amygdala, neurons	c-43	forebrain projection neurons	neuronal cells	756	Yes
amygdala, neurons	c-44	forebrain projection neurons	neuronal cells	401	Yes
amygdala, neurons	c-45	forebrain projection neurons	neuronal cells	387	Yes
amygdala, neurons	c-46	forebrain excitatory	neuronal cells	322	Yes
amygdala, neurons	c-47	serotonergic	neuronal cells	270	Yes
amygdala, neurons	c-48	forebrain projection neurons	neuronal cells	221	Yes
amygdala, neurons	c-49	forebrain excitatory	neuronal cells	71	Yes
amygdala, neurons	c-50	midbrain derived inhibitory neurons	neuronal cells	33	Yes
amygdala, neurons	c-51	unassigned	mixed cell types	32	No
amygdala, non-neuronal	c-1	oligodendrocytes	glial cells	4571	Yes
amygdala, non-neuronal	c-2	oligodendrocytes	glial cells	3294	Yes
amygdala, non-neuronal	c-3	oligodendrocytes	glial cells	2956	Yes
amygdala, non-neuronal	c-4	astrocytes	glial cells	2770	Yes
amygdala, non-neuronal	c-5	oligodendrocyte progenitor cells	glial cells	2679	Yes
amygdala, non-neuronal	c-6	oligodendrocyte progenitor cells	glial cells	2611	Yes
amygdala, non-neuronal	c-7	microglia	glial cells	2322	Yes
amygdala, non-neuronal	c-8	oligodendrocytes	glial cells	1994	Yes
amygdala, non-neuronal	c-9	astrocytes	glial cells	1799	Yes
amygdala, non-neuronal	c-10	astrocytes	glial cells	1168	Yes
amygdala, non-neuronal	c-11	microglia	glial cells	1096	Yes
amygdala, non-neuronal	c-12	oligodendrocyte progenitor cells	glial cells	1058	Yes
amygdala, non-neuronal	c-13	astrocytes	glial cells	1000	Yes
amygdala, non-neuronal	c-14	oligodendrocytes	glial cells	816	Yes
amygdala, non-neuronal	c-15	astrocytes	glial cells	766	Yes
amygdala, non-neuronal	c-16	oligodendrocytes	glial cells	556	Yes
amygdala, non-neuronal	c-17	oligodendrocytes	glial cells	356	Yes
amygdala, non-neuronal	c-18	fibroblasts	mesenchymal cells	257	Yes
amygdala, non-neuronal	c-19	ependymal cells	ciliated cells	247	Yes
amygdala, non-neuronal	c-20	mural cells & vecs	mixed cell types	207	No
amygdala, non-neuronal	c-21	macrophages & monocytes	blood and immune cells	110	Yes
amygdala, non-neuronal	c-22	oligodendrocytes	glial cells	89	Yes
amygdala, non-neuronal	c-23	pericytes	endothelial and mural cells	78	Yes
amygdala, non-neuronal	c-24	lymphocytes	blood and immune cells	77	Yes
amygdala, non-neuronal	c-25	oligodendrocyte progenitor cells	glial cells	66	Yes
amygdala, non-neuronal	c-26	vascular smooth muscle cells	endothelial and mural cells	26	Yes
amygdala, non-neuronal	c-27	fibroblasts	mesenchymal cells	9	No
basal ganglia, neurons	c-1	medium spiny neurons (msn)	neuronal cells	10479	Yes
basal ganglia, neurons	c-2	medium spiny neurons (msn)	neuronal cells	8999	Yes
basal ganglia, neurons	c-3	medium spiny neurons (msn)	neuronal cells	8700	Yes
basal ganglia, neurons	c-4	medium spiny neurons (msn)	neuronal cells	8069	Yes
basal ganglia, neurons	c-5	medium spiny neurons (msn)	neuronal cells	8059	Yes
basal ganglia, neurons	c-6	medium spiny neurons (msn)	neuronal cells	7782	Yes
basal ganglia, neurons	c-7	medium spiny neurons (msn)	neuronal cells	7536	Yes
basal ganglia, neurons	c-8	medium spiny neurons (msn)	neuronal cells	6887	Yes
basal ganglia, neurons	c-9	medium spiny neurons (msn)	neuronal cells	6749	Yes
basal ganglia, neurons	c-10	other inhibitory	neuronal cells	5919	Yes
basal ganglia, neurons	c-11	medium spiny neurons (msn)	neuronal cells	5758	Yes
basal ganglia, neurons	c-12	msn-like neurons	neuronal cells	5706	Yes
basal ganglia, neurons	c-13	medium spiny neurons (msn)	neuronal cells	5387	Yes
basal ganglia, neurons	c-14	medium spiny neurons (msn)	neuronal cells	5371	Yes
basal ganglia, neurons	c-15	mge derived interneuron	neuronal cells	5250	Yes
basal ganglia, neurons	c-16	other inhibitory	neuronal cells	5247	Yes
basal ganglia, neurons	c-17	medium spiny neurons (msn)	neuronal cells	5245	Yes
basal ganglia, neurons	c-18	medium spiny neurons (msn)	neuronal cells	4713	Yes
basal ganglia, neurons	c-19	other inhibitory	neuronal cells	4694	Yes
basal ganglia, neurons	c-20	medium spiny neurons (msn)	neuronal cells	4591	Yes
basal ganglia, neurons	c-21	forebrain excitatory	neuronal cells	4589	Yes
basal ganglia, neurons	c-22	medium spiny neurons (msn)	neuronal cells	4475	Yes
basal ganglia, neurons	c-23	medium spiny neurons (msn)	neuronal cells	4100	Yes
basal ganglia, neurons	c-24	medium spiny neurons (msn)	neuronal cells	3692	Yes
basal ganglia, neurons	c-25	other inhibitory	neuronal cells	3359	Yes
basal ganglia, neurons	c-26	medium spiny neurons (msn)	neuronal cells	2983	Yes
basal ganglia, neurons	c-27	medium spiny neurons (msn)	neuronal cells	2873	Yes
basal ganglia, neurons	c-28	msn-like neurons	neuronal cells	2836	No
basal ganglia, neurons	c-29	cge derived interneurons	neuronal cells	2722	Yes
basal ganglia, neurons	c-30	mge derived interneuron	neuronal cells	2477	Yes
basal ganglia, neurons	c-31	medium spiny neurons (msn)	neuronal cells	2207	Yes
basal ganglia, neurons	c-32	other inhibitory	neuronal cells	1987	Yes
basal ganglia, neurons	c-33	medium spiny neurons (msn)	neuronal cells	1832	Yes
basal ganglia, neurons	c-34	msn-like neurons	neuronal cells	1807	No
basal ganglia, neurons	c-35	msn-like neurons	neuronal cells	1752	Yes
basal ganglia, neurons	c-36	msn-like neurons	neuronal cells	1709	Yes
basal ganglia, neurons	c-37	other inhibitory	neuronal cells	1623	Yes
basal ganglia, neurons	c-38	forebrain projection neurons	neuronal cells	1543	Yes
basal ganglia, neurons	c-39	medium spiny neurons (msn)	neuronal cells	1357	Yes
basal ganglia, neurons	c-40	cge derived interneurons	neuronal cells	1331	Yes
basal ganglia, neurons	c-41	mge derived interneuron	neuronal cells	1145	Yes
basal ganglia, neurons	c-42	unassigned	mixed cell types	1136	No
basal ganglia, neurons	c-43	mge derived interneuron	neuronal cells	948	Yes
basal ganglia, neurons	c-44	forebrain excitatory	neuronal cells	533	Yes
basal ganglia, neurons	c-45	cholinergic	neuronal cells	514	Yes
basal ganglia, neurons	c-46	thalamic projection neurons	neuronal cells	400	Yes
basal ganglia, neurons	c-47	subcortical vglut2+ excitatory	neuronal cells	313	Yes
basal ganglia, neurons	c-48	midbrain derived inhibitory neurons	neuronal cells	228	Yes
basal ganglia, neurons	c-49	other inhibitory	neuronal cells	179	Yes
basal ganglia, non-neuronal	c-1	oligodendrocytes	glial cells	15071	Yes
basal ganglia, non-neuronal	c-2	oligodendrocytes	glial cells	14108	Yes
basal ganglia, non-neuronal	c-3	microglia	glial cells	11590	Yes
basal ganglia, non-neuronal	c-4	oligodendrocytes	glial cells	10696	Yes
basal ganglia, non-neuronal	c-5	astrocytes	glial cells	8272	Yes
basal ganglia, non-neuronal	c-6	oligodendrocyte progenitor cells	glial cells	7099	Yes
basal ganglia, non-neuronal	c-7	oligodendrocytes	glial cells	5828	Yes
basal ganglia, non-neuronal	c-8	microglia	glial cells	5811	Yes
basal ganglia, non-neuronal	c-9	choroid plexus epithelial cells	ciliated cells	5000	Yes
basal ganglia, non-neuronal	c-10	astrocytes	glial cells	3915	Yes
basal ganglia, non-neuronal	c-11	astrocytes	glial cells	3031	Yes
basal ganglia, non-neuronal	c-12	astrocytes	glial cells	1852	Yes
basal ganglia, non-neuronal	c-13	oligodendrocytes	glial cells	1628	Yes
basal ganglia, non-neuronal	c-14	astrocytes	glial cells	1512	Yes
basal ganglia, non-neuronal	c-15	oligodendrocytes	glial cells	1387	Yes
basal ganglia, non-neuronal	c-16	fibroblasts	mesenchymal cells	1192	Yes
basal ganglia, non-neuronal	c-17	choroid plexus epithelial cells	ciliated cells	1038	Yes
basal ganglia, non-neuronal	c-18	microglia	glial cells	1024	Yes
basal ganglia, non-neuronal	c-19	oligodendrocytes	glial cells	1018	Yes
basal ganglia, non-neuronal	c-20	macrophages & monocytes	blood and immune cells	1003	Yes
basal ganglia, non-neuronal	c-21	ependymal cells	ciliated cells	908	Yes
basal ganglia, non-neuronal	c-22	astrocytes	glial cells	481	Yes
basal ganglia, non-neuronal	c-23	lymphocytes	blood and immune cells	477	Yes
basal ganglia, non-neuronal	c-24	pericytes	endothelial and mural cells	360	Yes
basal ganglia, non-neuronal	c-25	oligodendrocytes	glial cells	348	No
basal ganglia, non-neuronal	c-26	oligodendrocyte progenitor cells	glial cells	318	Yes
basal ganglia, non-neuronal	c-27	vascular endothelial cells	endothelial and mural cells	312	Yes
basal ganglia, non-neuronal	c-28	ependymal cells	ciliated cells	291	Yes
basal ganglia, non-neuronal	c-29	astrocytes	glial cells	138	No
basal ganglia, non-neuronal	c-30	oligodendrocyte progenitor cells	glial cells	132	Yes
basal ganglia, non-neuronal	c-31	vascular smooth muscle cells	endothelial and mural cells	119	Yes
basal ganglia, non-neuronal	c-32	oligodendrocytes	glial cells	99	Yes
basal ganglia, non-neuronal	c-33	mixed cells	mixed cell types	14	No
basal ganglia, non-neuronal	c-34	mural cells	mixed cell types	2	No
basal ganglia, non-neuronal	c-35	oligodendrocytes	glial cells	2	No
cerebellum, neurons	c-1	cerebellar granular cells	neuronal cells	22866	Yes
cerebellum, neurons	c-2	cerebellar granular cells	neuronal cells	17315	Yes
cerebellum, neurons	c-3	cerebellar granular cells	neuronal cells	16854	Yes
cerebellum, neurons	c-4	cerebellar granular cells	neuronal cells	14082	Yes
cerebellum, neurons	c-5	cerebellar granular cells	neuronal cells	9814	Yes
cerebellum, neurons	c-6	cerebellar granular cells	neuronal cells	7317	Yes
cerebellum, neurons	c-7	tfap2b+ inhibitory	neuronal cells	6366	Yes
cerebellum, neurons	c-8	tfap2b+ inhibitory	neuronal cells	2122	Yes
cerebellum, neurons	c-9	tfap2b+ inhibitory	neuronal cells	1882	Yes
cerebellum, neurons	c-10	tfap2b+ inhibitory	neuronal cells	1155	Yes
cerebellum, neurons	c-11	pvalb+ excitatory neurons	neuronal cells	983	Yes
cerebellum, neurons	c-12	midbrain–hindbrain inhibitory neurons	neuronal cells	789	Yes
cerebellum, neurons	c-13	other excitatory neurons	neuronal cells	778	Yes
cerebellum, neurons	c-14	tfap2b+ inhibitory	neuronal cells	148	Yes
cerebellum, neurons	c-15	midbrain derived inhibitory neurons	neuronal cells	33	Yes
cerebellum, neurons	c-16	cerebellar purkinje cells	neuronal cells	11	Yes
cerebellum, non-neuronal	c-1	microglia	glial cells	4562	Yes
cerebellum, non-neuronal	c-2	oligodendrocytes	glial cells	4533	Yes
cerebellum, non-neuronal	c-3	astrocytes	glial cells	4449	Yes
cerebellum, non-neuronal	c-4	oligodendrocyte progenitor cells	glial cells	4376	Yes
cerebellum, non-neuronal	c-5	oligodendrocytes	glial cells	4145	Yes
cerebellum, non-neuronal	c-6	oligodendrocytes	glial cells	4144	Yes
cerebellum, non-neuronal	c-7	bergmann glia	glial cells	3838	Yes
cerebellum, non-neuronal	c-8	oligodendrocytes	glial cells	3722	Yes
cerebellum, non-neuronal	c-9	oligodendrocytes	glial cells	3330	Yes
cerebellum, non-neuronal	c-10	bergmann glia	glial cells	2572	Yes
cerebellum, non-neuronal	c-11	oligodendrocytes	glial cells	2114	Yes
cerebellum, non-neuronal	c-12	oligodendrocyte progenitor cells	glial cells	1780	Yes
cerebellum, non-neuronal	c-13	bergmann glia	glial cells	1294	Yes
cerebellum, non-neuronal	c-14	astrocytes	glial cells	790	Yes
cerebellum, non-neuronal	c-15	astrocytes	glial cells	690	Yes
cerebellum, non-neuronal	c-16	astrocytes	glial cells	648	Yes
cerebellum, non-neuronal	c-17	fibroblasts	mesenchymal cells	424	Yes
cerebellum, non-neuronal	c-18	oligodendrocytes	glial cells	421	Yes
cerebellum, non-neuronal	c-19	macrophages & monocytes	blood and immune cells	412	Yes
cerebellum, non-neuronal	c-20	vascular endothelial cells	endothelial and mural cells	371	Yes
cerebellum, non-neuronal	c-21	pericytes	endothelial and mural cells	268	Yes
cerebellum, non-neuronal	c-22	lymphocytes	blood and immune cells	240	Yes
cerebellum, non-neuronal	c-23	lymphocytes	blood and immune cells	67	Yes
cerebellum, non-neuronal	c-24	oligodendrocytes	glial cells	65	Yes
cerebellum, non-neuronal	c-25	vascular smooth muscle cells	endothelial and mural cells	23	Yes
cerebellum, non-neuronal	c-26	ependymal cells	ciliated cells	16	Yes
cerebellum, non-neuronal	c-27	lymphocytes	blood and immune cells	1	No
cerebral cortex, neurons	c-1	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-2	mge derived interneuron	neuronal cells	13800	Yes
cerebral cortex, neurons	c-3	cge derived interneurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-4	mge derived interneuron	neuronal cells	13800	Yes
cerebral cortex, neurons	c-5	cge derived interneurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-6	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-7	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-8	forebrain excitatory	neuronal cells	13800	Yes
cerebral cortex, neurons	c-9	mge derived interneuron	neuronal cells	13800	Yes
cerebral cortex, neurons	c-10	cge derived interneurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-11	cge derived interneurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-12	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-13	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-14	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-15	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-16	cge derived interneurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-17	forebrain excitatory	neuronal cells	13800	Yes
cerebral cortex, neurons	c-18	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-19	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-20	mge derived interneuron	neuronal cells	13800	Yes
cerebral cortex, neurons	c-21	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-22	cge derived interneurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-23	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-24	forebrain excitatory	neuronal cells	13800	Yes
cerebral cortex, neurons	c-25	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-26	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-27	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-28	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-29	forebrain projection neurons	neuronal cells	13800	Yes
cerebral cortex, neurons	c-30	mge derived interneuron	neuronal cells	13800	Yes
cerebral cortex, neurons	c-31	forebrain excitatory	neuronal cells	10008	Yes
cerebral cortex, neurons	c-32	mge derived interneuron	neuronal cells	9880	Yes
cerebral cortex, neurons	c-33	forebrain projection neurons	neuronal cells	9091	Yes
cerebral cortex, neurons	c-34	msn-like neurons	neuronal cells	8491	Yes
cerebral cortex, neurons	c-35	medium spiny neurons (msn)	neuronal cells	7793	Yes
cerebral cortex, neurons	c-36	mge derived interneuron	neuronal cells	6565	Yes
cerebral cortex, neurons	c-37	forebrain excitatory	neuronal cells	5655	Yes
cerebral cortex, neurons	c-38	forebrain excitatory	neuronal cells	5443	Yes
cerebral cortex, neurons	c-39	forebrain projection neurons	neuronal cells	4059	Yes
cerebral cortex, neurons	c-40	forebrain projection neurons	neuronal cells	3658	Yes
cerebral cortex, neurons	c-41	forebrain excitatory	neuronal cells	3027	Yes
cerebral cortex, neurons	c-42	forebrain projection neurons	neuronal cells	2647	Yes
cerebral cortex, neurons	c-43	forebrain projection neurons	neuronal cells	2634	Yes
cerebral cortex, neurons	c-44	mge derived interneuron	neuronal cells	2097	Yes
cerebral cortex, neurons	c-45	unassigned	mixed cell types	1583	No
cerebral cortex, neurons	c-46	forebrain projection neurons	neuronal cells	1411	Yes
cerebral cortex, neurons	c-47	mge derived interneuron	neuronal cells	949	Yes
cerebral cortex, neurons	c-48	forebrain projection neurons	neuronal cells	611	Yes
cerebral cortex, neurons	c-49	forebrain projection neurons	neuronal cells	150	Yes
cerebral cortex, non-neuronal	c-1	oligodendrocytes	glial cells	21033	Yes
cerebral cortex, non-neuronal	c-2	oligodendrocytes	glial cells	14952	Yes
cerebral cortex, non-neuronal	c-3	oligodendrocyte progenitor cells	glial cells	14313	Yes
cerebral cortex, non-neuronal	c-4	oligodendrocytes	glial cells	14083	Yes
cerebral cortex, non-neuronal	c-5	astrocytes	glial cells	13336	Yes
cerebral cortex, non-neuronal	c-6	astrocytes	glial cells	13177	Yes
cerebral cortex, non-neuronal	c-7	microglia	glial cells	12672	Yes
cerebral cortex, non-neuronal	c-8	oligodendrocyte progenitor cells	glial cells	11600	Yes
cerebral cortex, non-neuronal	c-9	oligodendrocytes	glial cells	11318	Yes
cerebral cortex, non-neuronal	c-10	oligodendrocytes	glial cells	11073	Yes
cerebral cortex, non-neuronal	c-11	astrocytes	glial cells	7120	Yes
cerebral cortex, non-neuronal	c-12	astrocytes	glial cells	5075	Yes
cerebral cortex, non-neuronal	c-13	astrocytes	glial cells	4367	Yes
cerebral cortex, non-neuronal	c-14	microglia	glial cells	1330	Yes
cerebral cortex, non-neuronal	c-15	vascular endothelial cells	endothelial and mural cells	1205	Yes
cerebral cortex, non-neuronal	c-16	fibroblasts	mesenchymal cells	885	Yes
cerebral cortex, non-neuronal	c-17	oligodendrocytes	glial cells	740	Yes
cerebral cortex, non-neuronal	c-18	macrophages & monocytes	blood and immune cells	563	Yes
cerebral cortex, non-neuronal	c-19	oligodendrocytes	glial cells	551	Yes
cerebral cortex, non-neuronal	c-20	oligodendrocyte progenitor cells	glial cells	539	Yes
cerebral cortex, non-neuronal	c-21	pericytes	endothelial and mural cells	466	Yes
cerebral cortex, non-neuronal	c-22	lymphocytes	blood and immune cells	411	Yes
cerebral cortex, non-neuronal	c-23	fibroblasts	mesenchymal cells	229	Yes
cerebral cortex, non-neuronal	c-24	vascular smooth muscle cells	endothelial and mural cells	127	Yes
cerebral cortex, non-neuronal	c-25	astrocytes	glial cells	115	No
cerebral cortex, non-neuronal	c-26	oligodendrocyte progenitor cells	glial cells	94	Yes
cerebral cortex, non-neuronal	c-27	fibroblasts	mesenchymal cells	87	Yes
cerebral cortex, non-neuronal	c-28	fibroblasts	mesenchymal cells	33	Yes
cerebral cortex, non-neuronal	c-29	pericytes	endothelial and mural cells	21	No
cerebral cortex, non-neuronal	c-30	fibroblasts	mesenchymal cells	9	No
cerebral cortex, non-neuronal	c-31	macrophages & monocytes	blood and immune cells	8	No
hippocampal formation, neurons	c-1	dentate gyrus excitatory	neuronal cells	15422	Yes
hippocampal formation, neurons	c-2	ca1-3 excitatory	neuronal cells	12624	Yes
hippocampal formation, neurons	c-3	cge derived interneurons	neuronal cells	11919	Yes
hippocampal formation, neurons	c-4	ca1-3 excitatory	neuronal cells	10063	Yes
hippocampal formation, neurons	c-5	dentate gyrus excitatory	neuronal cells	9620	Yes
hippocampal formation, neurons	c-6	mge derived interneuron	neuronal cells	9346	Yes
hippocampal formation, neurons	c-7	mge derived interneuron	neuronal cells	8770	Yes
hippocampal formation, neurons	c-8	ca1-3 excitatory	neuronal cells	7999	Yes
hippocampal formation, neurons	c-9	dentate gyrus excitatory	neuronal cells	7828	Yes
hippocampal formation, neurons	c-10	dentate gyrus excitatory	neuronal cells	7740	Yes
hippocampal formation, neurons	c-11	dentate gyrus excitatory	neuronal cells	7634	Yes
hippocampal formation, neurons	c-12	dentate gyrus excitatory	neuronal cells	7612	Yes
hippocampal formation, neurons	c-13	mge derived interneuron	neuronal cells	6745	Yes
hippocampal formation, neurons	c-14	ca1-3 excitatory	neuronal cells	6724	Yes
hippocampal formation, neurons	c-15	cge derived interneurons	neuronal cells	6387	Yes
hippocampal formation, neurons	c-16	ca1-3 excitatory	neuronal cells	5573	Yes
hippocampal formation, neurons	c-17	ca1-3 excitatory	neuronal cells	5522	Yes
hippocampal formation, neurons	c-18	ca1-3 excitatory	neuronal cells	4786	Yes
hippocampal formation, neurons	c-19	dentate gyrus excitatory	neuronal cells	4653	Yes
hippocampal formation, neurons	c-20	cge derived interneurons	neuronal cells	4543	Yes
hippocampal formation, neurons	c-21	cge derived interneurons	neuronal cells	4368	Yes
hippocampal formation, neurons	c-22	ca1-3 excitatory	neuronal cells	3832	Yes
hippocampal formation, neurons	c-23	forebrain projection neurons	neuronal cells	3773	Yes
hippocampal formation, neurons	c-24	ca4 excitatory	neuronal cells	3727	Yes
hippocampal formation, neurons	c-25	dentate gyrus excitatory	neuronal cells	3515	Yes
hippocampal formation, neurons	c-26	forebrain projection neurons	neuronal cells	3406	Yes
hippocampal formation, neurons	c-27	ca1-3 excitatory	neuronal cells	3284	Yes
hippocampal formation, neurons	c-28	forebrain projection neurons	neuronal cells	3235	Yes
hippocampal formation, neurons	c-29	ca4 excitatory	neuronal cells	2915	Yes
hippocampal formation, neurons	c-30	ca1-3 excitatory	neuronal cells	2911	Yes
hippocampal formation, neurons	c-31	forebrain projection neurons	neuronal cells	2887	Yes
hippocampal formation, neurons	c-32	ca1-3 excitatory	neuronal cells	2859	Yes
hippocampal formation, neurons	c-33	forebrain excitatory	neuronal cells	2758	Yes
hippocampal formation, neurons	c-34	forebrain excitatory	neuronal cells	2558	Yes
hippocampal formation, neurons	c-35	forebrain excitatory	neuronal cells	2465	Yes
hippocampal formation, neurons	c-36	forebrain projection neurons	neuronal cells	2298	Yes
hippocampal formation, neurons	c-37	forebrain projection neurons	neuronal cells	2243	Yes
hippocampal formation, neurons	c-38	forebrain projection neurons	neuronal cells	2237	Yes
hippocampal formation, neurons	c-39	ca1-3 excitatory	neuronal cells	2220	Yes
hippocampal formation, neurons	c-40	forebrain excitatory	neuronal cells	1842	Yes
hippocampal formation, neurons	c-41	dentate gyrus excitatory	neuronal cells	1771	Yes
hippocampal formation, neurons	c-42	ca1-3 excitatory	neuronal cells	1730	Yes
hippocampal formation, neurons	c-43	forebrain projection neurons	neuronal cells	1579	Yes
hippocampal formation, neurons	c-44	ca4 excitatory	neuronal cells	1555	Yes
hippocampal formation, neurons	c-45	other neuron	neuronal cells	1554	Yes
hippocampal formation, neurons	c-46	ca4 excitatory	neuronal cells	1525	Yes
hippocampal formation, neurons	c-47	mge derived interneuron	neuronal cells	1374	Yes
hippocampal formation, neurons	c-48	forebrain excitatory	neuronal cells	1077	Yes
hippocampal formation, neurons	c-49	ca4 excitatory	neuronal cells	812	Yes
hippocampal formation, neurons	c-50	other neuron	neuronal cells	806	Yes
hippocampal formation, neurons	c-51	unassigned	mixed cell types	664	No
hippocampal formation, neurons	c-52	medium spiny neurons (msn)	neuronal cells	494	Yes
hippocampal formation, neurons	c-53	dentate gyrus excitatory	neuronal cells	491	Yes
hippocampal formation, neurons	c-54	dentate gyrus excitatory	neuronal cells	473	Yes
hippocampal formation, neurons	c-55	forebrain excitatory	neuronal cells	277	Yes
hippocampal formation, neurons	c-56	forebrain projection neurons	neuronal cells	226	Yes
hippocampal formation, non-neuronal	c-1	oligodendrocyte progenitor cells	glial cells	15458	Yes
hippocampal formation, non-neuronal	c-2	oligodendrocytes	glial cells	14083	Yes
hippocampal formation, non-neuronal	c-3	oligodendrocytes	glial cells	11949	Yes
hippocampal formation, non-neuronal	c-4	microglia	glial cells	9591	Yes
hippocampal formation, non-neuronal	c-5	oligodendrocytes	glial cells	8630	Yes
hippocampal formation, non-neuronal	c-6	oligodendrocytes	glial cells	8055	Yes
hippocampal formation, non-neuronal	c-7	astrocytes	glial cells	6281	Yes
hippocampal formation, non-neuronal	c-8	astrocytes	glial cells	5739	Yes
hippocampal formation, non-neuronal	c-9	astrocytes	glial cells	5472	Yes
hippocampal formation, non-neuronal	c-10	astrocytes	glial cells	4726	Yes
hippocampal formation, non-neuronal	c-11	oligodendrocytes	glial cells	4036	Yes
hippocampal formation, non-neuronal	c-12	oligodendrocytes	glial cells	3306	Yes
hippocampal formation, non-neuronal	c-13	astrocytes	glial cells	2934	Yes
hippocampal formation, non-neuronal	c-14	ependymal cells	ciliated cells	1896	Yes
hippocampal formation, non-neuronal	c-15	astrocytes	glial cells	1453	Yes
hippocampal formation, non-neuronal	c-16	astrocytes	glial cells	1115	Yes
hippocampal formation, non-neuronal	c-17	oligodendrocyte progenitor cells	glial cells	1029	Yes
hippocampal formation, non-neuronal	c-18	vascular endothelial cells	endothelial and mural cells	850	Yes
hippocampal formation, non-neuronal	c-19	microglia	glial cells	783	Yes
hippocampal formation, non-neuronal	c-20	fibroblasts	mesenchymal cells	685	Yes
hippocampal formation, non-neuronal	c-21	microglia	glial cells	622	Yes
hippocampal formation, non-neuronal	c-22	oligodendrocytes	glial cells	404	Yes
hippocampal formation, non-neuronal	c-23	pericytes	endothelial and mural cells	249	Yes
hippocampal formation, non-neuronal	c-24	macrophages & monocytes	blood and immune cells	198	Yes
hippocampal formation, non-neuronal	c-25	lymphocytes	blood and immune cells	192	Yes
hippocampal formation, non-neuronal	c-26	choroid plexus epithelial cells	ciliated cells	131	Yes
hippocampal formation, non-neuronal	c-27	leukocytes	mixed cell types	119	No
hippocampal formation, non-neuronal	c-28	oligodendrocyte progenitor cells	glial cells	83	Yes
hippocampal formation, non-neuronal	c-29	vascular smooth muscle cells	endothelial and mural cells	66	Yes
hippocampal formation, non-neuronal	c-30	mixed cells	mixed cell types	7	No
hippocampal formation, non-neuronal	c-31	macrophages & monocytes	blood and immune cells	6	No
hypothalamus, neurons	c-1	unassigned	mixed cell types	4518	No
hypothalamus, neurons	c-2	hypothalamic vglut2+ neurons	neuronal cells	4386	Yes
hypothalamus, neurons	c-3	unassigned	mixed cell types	3814	No
hypothalamus, neurons	c-4	unassigned	mixed cell types	3723	No
hypothalamus, neurons	c-5	hypothalamic vglut2+ neurons	neuronal cells	3619	Yes
hypothalamus, neurons	c-6	hypothalamic vglut2+ neurons	neuronal cells	3602	Yes
hypothalamus, neurons	c-7	msn-like neurons	neuronal cells	3532	Yes
hypothalamus, neurons	c-8	other inhibitory	neuronal cells	3478	Yes
hypothalamus, neurons	c-9	subcortical vglut2+ excitatory	neuronal cells	3349	Yes
hypothalamus, neurons	c-10	hypothalamic vglut2+ neurons	neuronal cells	3319	Yes
hypothalamus, neurons	c-11	other inhibitory	neuronal cells	3312	Yes
hypothalamus, neurons	c-12	msn-like neurons	neuronal cells	3294	Yes
hypothalamus, neurons	c-13	subcortical vglut2+ excitatory	neuronal cells	3085	Yes
hypothalamus, neurons	c-14	other inhibitory	neuronal cells	2929	Yes
hypothalamus, neurons	c-15	subcortical vglut2+ excitatory	neuronal cells	2765	Yes
hypothalamus, neurons	c-16	subcortical vglut2+ excitatory	neuronal cells	2753	Yes
hypothalamus, neurons	c-17	other inhibitory	neuronal cells	2503	Yes
hypothalamus, neurons	c-18	other inhibitory	neuronal cells	2333	Yes
hypothalamus, neurons	c-19	forebrain projection neurons	neuronal cells	2325	Yes
hypothalamus, neurons	c-20	subcortical vglut2+ excitatory	neuronal cells	2303	Yes
hypothalamus, neurons	c-21	msn-like neurons	neuronal cells	2268	Yes
hypothalamus, neurons	c-22	midbrain derived inhibitory neurons	neuronal cells	2230	Yes
hypothalamus, neurons	c-23	other inhibitory	neuronal cells	2187	Yes
hypothalamus, neurons	c-24	cge derived interneurons	neuronal cells	2172	Yes
hypothalamus, neurons	c-25	subcortical vglut2+ excitatory	neuronal cells	2170	Yes
hypothalamus, neurons	c-26	other inhibitory	neuronal cells	2012	Yes
hypothalamus, neurons	c-27	subcortical vglut2+ excitatory	neuronal cells	1983	Yes
hypothalamus, neurons	c-28	unassigned	mixed cell types	1982	No
hypothalamus, neurons	c-29	other inhibitory	neuronal cells	1945	Yes
hypothalamus, neurons	c-30	subcortical vglut2+ excitatory	neuronal cells	1840	Yes
hypothalamus, neurons	c-31	forebrain projection neurons	neuronal cells	1744	Yes
hypothalamus, neurons	c-32	other inhibitory	neuronal cells	1727	Yes
hypothalamus, neurons	c-33	subcortical vglut2+ excitatory	neuronal cells	1676	Yes
hypothalamus, neurons	c-34	monoaminergic	neuronal cells	1632	Yes
hypothalamus, neurons	c-35	subcortical vglut2+ excitatory	neuronal cells	1581	Yes
hypothalamus, neurons	c-36	mge derived interneuron	neuronal cells	1375	Yes
hypothalamus, neurons	c-37	subcortical vglut2+ excitatory	neuronal cells	1309	Yes
hypothalamus, neurons	c-38	other inhibitory	neuronal cells	1218	Yes
hypothalamus, neurons	c-39	msn-like neurons	neuronal cells	1004	Yes
hypothalamus, neurons	c-40	unassigned	mixed cell types	938	No
hypothalamus, neurons	c-41	msn-like neurons	neuronal cells	933	Yes
hypothalamus, neurons	c-42	forebrain projection neurons	neuronal cells	829	Yes
hypothalamus, neurons	c-43	hypothalamic vglut2+ neurons	neuronal cells	816	Yes
hypothalamus, neurons	c-44	unassigned	mixed cell types	734	No
hypothalamus, neurons	c-45	mge derived interneuron	neuronal cells	686	Yes
hypothalamus, neurons	c-46	subcortical vglut2+ excitatory	neuronal cells	648	Yes
hypothalamus, neurons	c-47	other inhibitory	neuronal cells	637	Yes
hypothalamus, neurons	c-48	neurosecretory	neuronal cells	620	Yes
hypothalamus, neurons	c-49	neurosecretory	neuronal cells	482	Yes
hypothalamus, neurons	c-50	other excitatory neurons	neuronal cells	386	Yes
hypothalamus, neurons	c-51	neurosecretory	neuronal cells	341	Yes
hypothalamus, neurons	c-52	other inhibitory	neuronal cells	262	Yes
hypothalamus, neurons	c-53	msn-like neurons	neuronal cells	188	Yes
hypothalamus, neurons	c-54	midbrain–hindbrain inhibitory neurons	neuronal cells	180	Yes
hypothalamus, neurons	c-55	forebrain projection neurons	neuronal cells	128	Yes
hypothalamus, neurons	c-56	upper rhombic lip-derived neurons	neuronal cells	104	Yes
hypothalamus, neurons	c-57	orexinergic	neuronal cells	100	Yes
hypothalamus, neurons	c-58	forebrain projection neurons	neuronal cells	56	Yes
hypothalamus, non-neuronal	c-1	oligodendrocytes	glial cells	2533	Yes
hypothalamus, non-neuronal	c-2	oligodendrocytes	glial cells	1887	Yes
hypothalamus, non-neuronal	c-3	oligodendrocytes	glial cells	1803	Yes
hypothalamus, non-neuronal	c-4	astrocytes	glial cells	1427	Yes
hypothalamus, non-neuronal	c-5	microglia	glial cells	1404	Yes
hypothalamus, non-neuronal	c-6	oligodendrocytes	glial cells	1338	Yes
hypothalamus, non-neuronal	c-7	astrocytes	glial cells	1288	Yes
hypothalamus, non-neuronal	c-8	oligodendrocytes	glial cells	1282	Yes
hypothalamus, non-neuronal	c-9	oligodendrocyte progenitor cells	glial cells	1216	Yes
hypothalamus, non-neuronal	c-10	microglia	glial cells	1137	Yes
hypothalamus, non-neuronal	c-11	oligodendrocytes	glial cells	1053	Yes
hypothalamus, non-neuronal	c-12	astrocytes	glial cells	945	Yes
hypothalamus, non-neuronal	c-13	astrocytes	glial cells	908	Yes
hypothalamus, non-neuronal	c-14	oligodendrocyte progenitor cells	glial cells	747	Yes
hypothalamus, non-neuronal	c-15	oligodendrocyte progenitor cells	glial cells	710	Yes
hypothalamus, non-neuronal	c-16	microglia	glial cells	642	Yes
hypothalamus, non-neuronal	c-17	oligodendrocytes	glial cells	592	Yes
hypothalamus, non-neuronal	c-18	oligodendrocyte progenitor cells	glial cells	586	Yes
hypothalamus, non-neuronal	c-19	astrocytes	glial cells	406	Yes
hypothalamus, non-neuronal	c-20	fibroblasts	mesenchymal cells	316	Yes
hypothalamus, non-neuronal	c-21	oligodendrocytes	glial cells	256	Yes
hypothalamus, non-neuronal	c-22	oligodendrocytes	glial cells	253	Yes
hypothalamus, non-neuronal	c-23	ependymal cells	ciliated cells	244	Yes
hypothalamus, non-neuronal	c-24	vascular endothelial cells	endothelial and mural cells	189	Yes
hypothalamus, non-neuronal	c-25	astrocytes	glial cells	182	Yes
hypothalamus, non-neuronal	c-26	macrophages & monocytes	blood and immune cells	172	Yes
hypothalamus, non-neuronal	c-27	astrocytes	glial cells	171	Yes
hypothalamus, non-neuronal	c-28	lymphocytes	blood and immune cells	158	Yes
hypothalamus, non-neuronal	c-29	vascular smooth muscle cells	endothelial and mural cells	115	Yes
hypothalamus, non-neuronal	c-30	fibroblasts	mesenchymal cells	91	Yes
hypothalamus, non-neuronal	c-31	pericytes	endothelial and mural cells	79	Yes
hypothalamus, non-neuronal	c-32	oligodendrocyte progenitor cells	glial cells	50	Yes
hypothalamus, non-neuronal	c-33	oligodendrocytes	glial cells	41	Yes
hypothalamus, non-neuronal	c-34	oligodendrocyte progenitor cells	glial cells	40	Yes
hypothalamus, non-neuronal	c-35	lymphocytes	blood and immune cells	38	Yes
hypothalamus, non-neuronal	c-36	mural cells	mixed cell types	29	No
hypothalamus, non-neuronal	c-37	macrophages & monocytes	blood and immune cells	19	Yes
hypothalamus, non-neuronal	c-38	fibroblasts	mesenchymal cells	8	No
hypothalamus, non-neuronal	c-39	lymphocytes	blood and immune cells	4	No
medulla oblongata, neurons	c-1	upper rhombic lip-derived neurons	neuronal cells	6115	Yes
medulla oblongata, neurons	c-2	upper rhombic lip-derived neurons	neuronal cells	4439	Yes
medulla oblongata, neurons	c-3	upper rhombic lip-derived neurons	neuronal cells	3484	Yes
medulla oblongata, neurons	c-4	unassigned	mixed cell types	3143	No
medulla oblongata, neurons	c-5	upper rhombic lip-derived neurons	neuronal cells	2553	Yes
medulla oblongata, neurons	c-6	lamp5+ glycinergic inhibitory	neuronal cells	1863	Yes
medulla oblongata, neurons	c-7	unassigned	mixed cell types	1845	No
medulla oblongata, neurons	c-8	upper rhombic lip-derived neurons	neuronal cells	1667	Yes
medulla oblongata, neurons	c-9	lower rhombic lip-derived neurons	neuronal cells	1643	Yes
medulla oblongata, neurons	c-10	lamp5+ glycinergic inhibitory	neuronal cells	1430	Yes
medulla oblongata, neurons	c-11	lamp5+ glycinergic inhibitory	neuronal cells	1387	Yes
medulla oblongata, neurons	c-12	brainstem vglut2+ excitatory	neuronal cells	1183	Yes
medulla oblongata, neurons	c-13	brainstem vglut2+ excitatory	neuronal cells	1170	Yes
medulla oblongata, neurons	c-14	lamp5+ glycinergic inhibitory	neuronal cells	1159	Yes
medulla oblongata, neurons	c-15	lamp5+ glycinergic inhibitory	neuronal cells	994	Yes
medulla oblongata, neurons	c-16	other excitatory neurons	neuronal cells	839	Yes
medulla oblongata, neurons	c-17	lower rhombic lip-derived neurons	neuronal cells	803	Yes
medulla oblongata, neurons	c-18	lamp5+ glycinergic inhibitory	neuronal cells	788	Yes
medulla oblongata, neurons	c-19	lamp5+ glycinergic inhibitory	neuronal cells	748	Yes
medulla oblongata, neurons	c-20	other excitatory neurons	neuronal cells	720	Yes
medulla oblongata, neurons	c-21	tfap2b+ inhibitory	neuronal cells	692	Yes
medulla oblongata, neurons	c-22	lower rhombic lip-derived neurons	neuronal cells	688	Yes
medulla oblongata, neurons	c-23	brainstem vglut2+ excitatory	neuronal cells	688	Yes
medulla oblongata, neurons	c-24	brainstem vglut2+ excitatory	neuronal cells	608	Yes
medulla oblongata, neurons	c-25	brainstem vglut2+ excitatory	neuronal cells	559	Yes
medulla oblongata, neurons	c-26	other excitatory neurons	neuronal cells	558	Yes
medulla oblongata, neurons	c-27	other excitatory neurons	neuronal cells	516	Yes
medulla oblongata, neurons	c-28	spinal peptidergic excitatory neurons	neuronal cells	508	Yes
medulla oblongata, neurons	c-29	brainstem vglut2+ excitatory	neuronal cells	478	Yes
medulla oblongata, neurons	c-30	brainstem vglut2+ excitatory	neuronal cells	427	Yes
medulla oblongata, neurons	c-31	lamp5+ glycinergic inhibitory	neuronal cells	411	Yes
medulla oblongata, neurons	c-32	spinal peptidergic excitatory neurons	neuronal cells	378	Yes
medulla oblongata, neurons	c-33	lamp5+ glycinergic inhibitory	neuronal cells	376	Yes
medulla oblongata, neurons	c-34	pvalb+ excitatory neurons	neuronal cells	331	Yes
medulla oblongata, neurons	c-35	lamp5+ glycinergic inhibitory	neuronal cells	299	Yes
medulla oblongata, neurons	c-36	brainstem vglut2+ excitatory	neuronal cells	235	Yes
medulla oblongata, neurons	c-37	serotonergic	neuronal cells	187	Yes
medulla oblongata, neurons	c-38	brainstem vglut2+ excitatory	neuronal cells	177	Yes
medulla oblongata, neurons	c-39	cholinergic	neuronal cells	125	Yes
medulla oblongata, neurons	c-40	brainstem vglut2+ excitatory	neuronal cells	102	Yes
medulla oblongata, neurons	c-41	lamp5+ glycinergic inhibitory	neuronal cells	88	Yes
medulla oblongata, neurons	c-42	midbrain derived inhibitory neurons	neuronal cells	79	Yes
medulla oblongata, neurons	c-43	tfap2b+ inhibitory	neuronal cells	47	Yes
medulla oblongata, neurons	c-44	other excitatory neurons	neuronal cells	38	Yes
medulla oblongata, neurons	c-45	brainstem vglut2+ excitatory	neuronal cells	25	Yes
medulla oblongata, non-neuronal	c-1	oligodendrocytes	glial cells	4486	Yes
medulla oblongata, non-neuronal	c-2	oligodendrocytes	glial cells	4263	Yes
medulla oblongata, non-neuronal	c-3	oligodendrocytes	glial cells	3962	Yes
medulla oblongata, non-neuronal	c-4	oligodendrocytes	glial cells	3272	Yes
medulla oblongata, non-neuronal	c-5	oligodendrocytes	glial cells	2965	Yes
medulla oblongata, non-neuronal	c-6	microglia	glial cells	2922	Yes
medulla oblongata, non-neuronal	c-7	oligodendrocyte progenitor cells	glial cells	2654	Yes
medulla oblongata, non-neuronal	c-8	oligodendrocytes	glial cells	2335	Yes
medulla oblongata, non-neuronal	c-9	astrocytes	glial cells	1998	Yes
medulla oblongata, non-neuronal	c-10	oligodendrocytes	glial cells	1408	Yes
medulla oblongata, non-neuronal	c-11	choroid plexus epithelial cells	ciliated cells	1403	Yes
medulla oblongata, non-neuronal	c-12	astrocytes	glial cells	1072	Yes
medulla oblongata, non-neuronal	c-13	astrocytes	glial cells	1048	Yes
medulla oblongata, non-neuronal	c-14	ependymal cells	ciliated cells	882	Yes
medulla oblongata, non-neuronal	c-15	astrocytes	glial cells	842	Yes
medulla oblongata, non-neuronal	c-16	fibroblasts	mesenchymal cells	549	Yes
medulla oblongata, non-neuronal	c-17	astrocytes	glial cells	442	Yes
medulla oblongata, non-neuronal	c-18	vascular endothelial cells	endothelial and mural cells	379	Yes
medulla oblongata, non-neuronal	c-19	microglia	glial cells	214	Yes
medulla oblongata, non-neuronal	c-20	pericytes	endothelial and mural cells	208	Yes
medulla oblongata, non-neuronal	c-21	lymphocytes	blood and immune cells	188	Yes
medulla oblongata, non-neuronal	c-22	bergmann glia	glial cells	145	No
medulla oblongata, non-neuronal	c-23	macrophages & monocytes	blood and immune cells	130	Yes
medulla oblongata, non-neuronal	c-24	vascular smooth muscle cells	endothelial and mural cells	110	Yes
medulla oblongata, non-neuronal	c-25	mixed cells	mixed cell types	106	No
medulla oblongata, non-neuronal	c-26	mixed cells	mixed cell types	62	No
medulla oblongata, non-neuronal	c-27	oligodendrocytes	glial cells	51	Yes
medulla oblongata, non-neuronal	c-28	schwann cells	glial cells	50	Yes
medulla oblongata, non-neuronal	c-29	macrophages & monocytes	blood and immune cells	46	Yes
medulla oblongata, non-neuronal	c-30	oligodendrocyte progenitor cells	glial cells	39	Yes
medulla oblongata, non-neuronal	c-31	fibroblasts	mesenchymal cells	38	Yes
medulla oblongata, non-neuronal	c-32	mixed cells	mixed cell types	20	No
midbrain, neurons	c-1	midbrain derived inhibitory neurons	neuronal cells	10325	Yes
midbrain, neurons	c-2	upper rhombic lip-derived neurons	neuronal cells	9232	Yes
midbrain, neurons	c-3	midbrain derived inhibitory neurons	neuronal cells	9030	Yes
midbrain, neurons	c-4	midbrain derived inhibitory neurons	neuronal cells	7559	Yes
midbrain, neurons	c-5	unassigned	mixed cell types	5067	No
midbrain, neurons	c-6	brainstem vglut2+ excitatory	neuronal cells	4939	Yes
midbrain, neurons	c-7	midbrain–hindbrain inhibitory neurons	neuronal cells	4790	Yes
midbrain, neurons	c-8	midbrain–hindbrain inhibitory neurons	neuronal cells	4262	Yes
midbrain, neurons	c-9	brainstem vglut2+ excitatory	neuronal cells	4175	Yes
midbrain, neurons	c-10	subcortical vglut2+ excitatory	neuronal cells	3950	Yes
midbrain, neurons	c-11	midbrain–hindbrain inhibitory neurons	neuronal cells	3519	Yes
midbrain, neurons	c-12	brainstem vglut2+ excitatory	neuronal cells	3312	Yes
midbrain, neurons	c-13	subcortical vglut2+ excitatory	neuronal cells	3259	Yes
midbrain, neurons	c-14	brainstem vglut2+ excitatory	neuronal cells	3132	Yes
midbrain, neurons	c-15	brainstem vglut2+ excitatory	neuronal cells	2898	Yes
midbrain, neurons	c-16	subcortical vglut2+ excitatory	neuronal cells	2870	Yes
midbrain, neurons	c-17	midbrain–hindbrain inhibitory neurons	neuronal cells	2845	Yes
midbrain, neurons	c-18	subcortical vglut2+ excitatory	neuronal cells	2758	Yes
midbrain, neurons	c-19	midbrain–hindbrain inhibitory neurons	neuronal cells	2534	Yes
midbrain, neurons	c-20	midbrain–hindbrain inhibitory neurons	neuronal cells	2487	Yes
midbrain, neurons	c-21	subcortical vglut2+ excitatory	neuronal cells	2411	Yes
midbrain, neurons	c-22	brainstem vglut2+ excitatory	neuronal cells	2397	Yes
midbrain, neurons	c-23	midbrain–hindbrain inhibitory neurons	neuronal cells	2308	Yes
midbrain, neurons	c-24	midbrain–hindbrain inhibitory neurons	neuronal cells	2117	Yes
midbrain, neurons	c-25	thalamic projection neurons	neuronal cells	1755	Yes
midbrain, neurons	c-26	midbrain–hindbrain inhibitory neurons	neuronal cells	1751	Yes
midbrain, neurons	c-27	midbrain–hindbrain inhibitory neurons	neuronal cells	1632	Yes
midbrain, neurons	c-28	midbrain derived inhibitory neurons	neuronal cells	1586	Yes
midbrain, neurons	c-29	brainstem vglut2+ excitatory	neuronal cells	1582	Yes
midbrain, neurons	c-30	subcortical vglut2+ excitatory	neuronal cells	1528	Yes
midbrain, neurons	c-31	dopaminergic	neuronal cells	1457	Yes
midbrain, neurons	c-32	midbrain–hindbrain inhibitory neurons	neuronal cells	1298	Yes
midbrain, neurons	c-33	pvalb+ excitatory neurons	neuronal cells	1143	Yes
midbrain, neurons	c-34	pvalb+ excitatory neurons	neuronal cells	1075	Yes
midbrain, neurons	c-35	msn-like neurons	neuronal cells	1047	Yes
midbrain, neurons	c-36	unassigned	mixed cell types	1031	No
midbrain, neurons	c-37	cge derived interneurons	neuronal cells	1029	Yes
midbrain, neurons	c-38	other excitatory neurons	neuronal cells	1010	Yes
midbrain, neurons	c-39	midbrain derived inhibitory neurons	neuronal cells	862	Yes
midbrain, neurons	c-40	subcortical vglut2+ excitatory	neuronal cells	783	Yes
midbrain, neurons	c-41	midbrain–hindbrain inhibitory neurons	neuronal cells	688	Yes
midbrain, neurons	c-42	brainstem vglut2+ excitatory	neuronal cells	553	Yes
midbrain, neurons	c-43	other excitatory neurons	neuronal cells	521	Yes
midbrain, neurons	c-44	monoaminergic	neuronal cells	499	Yes
midbrain, neurons	c-45	midbrain–hindbrain inhibitory neurons	neuronal cells	427	Yes
midbrain, neurons	c-46	other excitatory neurons	neuronal cells	361	Yes
midbrain, neurons	c-47	tfap2b+ inhibitory	neuronal cells	318	Yes
midbrain, neurons	c-48	lower rhombic lip-derived neurons	neuronal cells	232	Yes
midbrain, neurons	c-49	midbrain–hindbrain inhibitory neurons	neuronal cells	211	Yes
midbrain, neurons	c-50	subcortical vglut2+ excitatory	neuronal cells	94	Yes
midbrain, neurons	c-51	other excitatory neurons	neuronal cells	37	No
midbrain, neurons	c-52	other inhibitory	neuronal cells	24	No
midbrain, non-neuronal	c-1	oligodendrocytes	glial cells	14698	Yes
midbrain, non-neuronal	c-2	oligodendrocytes	glial cells	13937	Yes
midbrain, non-neuronal	c-3	microglia	glial cells	13832	Yes
midbrain, non-neuronal	c-4	oligodendrocytes	glial cells	13797	Yes
midbrain, non-neuronal	c-5	oligodendrocyte progenitor cells	glial cells	11710	Yes
midbrain, non-neuronal	c-6	astrocytes	glial cells	9868	Yes
midbrain, non-neuronal	c-7	oligodendrocytes	glial cells	9195	Yes
midbrain, non-neuronal	c-8	oligodendrocytes	glial cells	8660	Yes
midbrain, non-neuronal	c-9	oligodendrocytes	glial cells	8298	Yes
midbrain, non-neuronal	c-10	oligodendrocytes	glial cells	5787	Yes
midbrain, non-neuronal	c-11	oligodendrocytes	glial cells	5767	Yes
midbrain, non-neuronal	c-12	astrocytes	glial cells	3410	Yes
midbrain, non-neuronal	c-13	fibroblasts	mesenchymal cells	705	Yes
midbrain, non-neuronal	c-14	lymphocytes	blood and immune cells	459	Yes
midbrain, non-neuronal	c-15	macrophages & monocytes	blood and immune cells	402	Yes
midbrain, non-neuronal	c-16	ependymal cells	ciliated cells	270	Yes
midbrain, non-neuronal	c-17	vascular endothelial cells	endothelial and mural cells	243	Yes
midbrain, non-neuronal	c-18	pericytes	endothelial and mural cells	243	Yes
midbrain, non-neuronal	c-19	oligodendrocyte progenitor cells	glial cells	177	Yes
midbrain, non-neuronal	c-20	oligodendrocytes	glial cells	104	Yes
midbrain, non-neuronal	c-21	vascular smooth muscle cells	endothelial and mural cells	84	Yes
midbrain, non-neuronal	c-22	oligodendrocyte progenitor cells	glial cells	71	No
midbrain, non-neuronal	c-23	leukocytes	mixed cell types	57	No
midbrain, non-neuronal	c-24	vascular endothelial cells	endothelial and mural cells	43	Yes
midbrain, non-neuronal	c-25	pericytes	endothelial and mural cells	36	Yes
midbrain, non-neuronal	c-26	bergmann glia	glial cells	29	No
midbrain, non-neuronal	c-27	mixed cells	mixed cell types	11	No
midbrain, non-neuronal	c-28	macrophages & monocytes	blood and immune cells	1	No
pons, neurons	c-1	lower rhombic lip-derived neurons	neuronal cells	8195	Yes
pons, neurons	c-2	upper rhombic lip-derived neurons	neuronal cells	7814	Yes
pons, neurons	c-3	lower rhombic lip-derived neurons	neuronal cells	7367	Yes
pons, neurons	c-4	upper rhombic lip-derived neurons	neuronal cells	7090	Yes
pons, neurons	c-5	lower rhombic lip-derived neurons	neuronal cells	6670	Yes
pons, neurons	c-6	lower rhombic lip-derived neurons	neuronal cells	5811	Yes
pons, neurons	c-7	lower rhombic lip-derived neurons	neuronal cells	5457	Yes
pons, neurons	c-8	lamp5+ glycinergic inhibitory	neuronal cells	4748	Yes
pons, neurons	c-9	brainstem vglut2+ excitatory	neuronal cells	4740	Yes
pons, neurons	c-10	lower rhombic lip-derived neurons	neuronal cells	4622	Yes
pons, neurons	c-11	lower rhombic lip-derived neurons	neuronal cells	4296	Yes
pons, neurons	c-12	unassigned	mixed cell types	3957	No
pons, neurons	c-13	midbrain derived inhibitory neurons	neuronal cells	3749	Yes
pons, neurons	c-14	midbrain–hindbrain inhibitory neurons	neuronal cells	3692	Yes
pons, neurons	c-15	upper rhombic lip-derived neurons	neuronal cells	3686	Yes
pons, neurons	c-16	brainstem vglut2+ excitatory	neuronal cells	2929	Yes
pons, neurons	c-17	lower rhombic lip-derived neurons	neuronal cells	2291	Yes
pons, neurons	c-18	midbrain–hindbrain inhibitory neurons	neuronal cells	1951	Yes
pons, neurons	c-19	midbrain–hindbrain inhibitory neurons	neuronal cells	1932	Yes
pons, neurons	c-20	subcortical vglut2+ excitatory	neuronal cells	1701	Yes
pons, neurons	c-21	subcortical vglut2+ excitatory	neuronal cells	1626	Yes
pons, neurons	c-22	subcortical vglut2+ excitatory	neuronal cells	1620	Yes
pons, neurons	c-23	lamp5+ glycinergic inhibitory	neuronal cells	1303	Yes
pons, neurons	c-24	lamp5+ glycinergic inhibitory	neuronal cells	1294	Yes
pons, neurons	c-25	serotonergic	neuronal cells	1136	Yes
pons, neurons	c-26	tfap2b+ inhibitory	neuronal cells	1126	Yes
pons, neurons	c-27	brainstem vglut2+ excitatory	neuronal cells	1094	Yes
pons, neurons	c-28	vglut3 neuron	neuronal cells	999	Yes
pons, neurons	c-29	other neuron	neuronal cells	716	No
pons, neurons	c-30	other excitatory neurons	neuronal cells	418	Yes
pons, neurons	c-31	midbrain–hindbrain inhibitory neurons	neuronal cells	333	Yes
pons, neurons	c-32	pvalb+ excitatory neurons	neuronal cells	302	Yes
pons, neurons	c-33	tfap2b+ inhibitory	neuronal cells	262	Yes
pons, neurons	c-34	midbrain–hindbrain inhibitory neurons	neuronal cells	245	Yes
pons, neurons	c-35	subcortical vglut2+ excitatory	neuronal cells	196	Yes
pons, neurons	c-36	noradrenergic	neuronal cells	142	Yes
pons, neurons	c-37	lower rhombic lip-derived neurons	neuronal cells	115	Yes
pons, neurons	c-38	tfap2b+ inhibitory	neuronal cells	67	Yes
pons, neurons	c-39	subcortical vglut2+ excitatory	neuronal cells	48	Yes
pons, neurons	c-40	pvalb+ excitatory neurons	neuronal cells	26	Yes
pons, non-neuronal	c-1	oligodendrocytes	glial cells	14000	Yes
pons, non-neuronal	c-2	oligodendrocytes	glial cells	13622	Yes
pons, non-neuronal	c-3	oligodendrocyte progenitor cells	glial cells	11712	Yes
pons, non-neuronal	c-4	oligodendrocytes	glial cells	11456	Yes
pons, non-neuronal	c-5	oligodendrocytes	glial cells	9085	Yes
pons, non-neuronal	c-6	oligodendrocytes	glial cells	7258	Yes
pons, non-neuronal	c-7	microglia	glial cells	6924	Yes
pons, non-neuronal	c-8	astrocytes	glial cells	6201	Yes
pons, non-neuronal	c-9	oligodendrocytes	glial cells	5396	Yes
pons, non-neuronal	c-10	astrocytes	glial cells	4325	Yes
pons, non-neuronal	c-11	oligodendrocytes	glial cells	3729	Yes
pons, non-neuronal	c-12	fibroblasts	mesenchymal cells	990	Yes
pons, non-neuronal	c-13	vascular endothelial cells	endothelial and mural cells	507	Yes
pons, non-neuronal	c-14	pericytes	endothelial and mural cells	467	Yes
pons, non-neuronal	c-15	ependymal cells	ciliated cells	418	Yes
pons, non-neuronal	c-16	lymphocytes	blood and immune cells	408	Yes
pons, non-neuronal	c-17	macrophages & monocytes	blood and immune cells	206	Yes
pons, non-neuronal	c-18	microglia	glial cells	173	Yes
pons, non-neuronal	c-19	bergmann glia	glial cells	149	No
pons, non-neuronal	c-20	oligodendrocytes	glial cells	132	Yes
pons, non-neuronal	c-21	oligodendrocyte progenitor cells	glial cells	112	Yes
pons, non-neuronal	c-22	vascular smooth muscle cells	endothelial and mural cells	87	Yes
pons, non-neuronal	c-23	macrophages & monocytes	blood and immune cells	71	Yes
pons, non-neuronal	c-24	oligodendrocytes	glial cells	43	Yes
pons, non-neuronal	c-25	fibroblasts	mesenchymal cells	26	Yes
pons, non-neuronal	c-26	choroid plexus epithelial cells	ciliated cells	19	No
pons, non-neuronal	c-27	macrophages & monocytes	blood and immune cells	16	No
pons, non-neuronal	c-28	mixed cells	mixed cell types	9	No
spinal cord, neurons	c-1	upper rhombic lip-derived neurons	neuronal cells	859	Yes
spinal cord, neurons	c-2	spinal peptidergic excitatory neurons	neuronal cells	415	Yes
spinal cord, neurons	c-3	brainstem vglut2+ excitatory	neuronal cells	376	Yes
spinal cord, neurons	c-4	spinal peptidergic excitatory neurons	neuronal cells	339	Yes
spinal cord, neurons	c-5	spinal peptidergic excitatory neurons	neuronal cells	336	Yes
spinal cord, neurons	c-6	spinal peptidergic excitatory neurons	neuronal cells	260	Yes
spinal cord, neurons	c-7	spinal peptidergic excitatory neurons	neuronal cells	245	Yes
spinal cord, neurons	c-8	spinal peptidergic excitatory neurons	neuronal cells	228	Yes
spinal cord, neurons	c-9	spinal peptidergic excitatory neurons	neuronal cells	211	Yes
spinal cord, neurons	c-10	lamp5+ glycinergic inhibitory	neuronal cells	205	Yes
spinal cord, neurons	c-11	lamp5+ glycinergic inhibitory	neuronal cells	170	Yes
spinal cord, neurons	c-12	lamp5+ glycinergic inhibitory	neuronal cells	165	Yes
spinal cord, neurons	c-13	spinal peptidergic excitatory neurons	neuronal cells	157	Yes
spinal cord, neurons	c-14	brainstem vglut2+ excitatory	neuronal cells	154	Yes
spinal cord, neurons	c-15	lamp5+ glycinergic inhibitory	neuronal cells	148	Yes
spinal cord, neurons	c-16	other neuron	neuronal cells	137	No
spinal cord, neurons	c-17	lamp5+ glycinergic inhibitory	neuronal cells	134	Yes
spinal cord, neurons	c-18	lamp5+ glycinergic inhibitory	neuronal cells	108	Yes
spinal cord, neurons	c-19	lamp5+ glycinergic inhibitory	neuronal cells	104	Yes
spinal cord, neurons	c-20	spinal peptidergic excitatory neurons	neuronal cells	101	Yes
spinal cord, neurons	c-21	lamp5+ glycinergic inhibitory	neuronal cells	98	Yes
spinal cord, neurons	c-22	lamp5+ glycinergic inhibitory	neuronal cells	90	Yes
spinal cord, neurons	c-23	lamp5+ glycinergic inhibitory	neuronal cells	87	Yes
spinal cord, neurons	c-24	brainstem vglut2+ excitatory	neuronal cells	86	Yes
spinal cord, neurons	c-25	brainstem vglut2+ excitatory	neuronal cells	83	Yes
spinal cord, neurons	c-26	lamp5+ glycinergic inhibitory	neuronal cells	82	Yes
spinal cord, neurons	c-27	spinal peptidergic excitatory neurons	neuronal cells	65	Yes
spinal cord, neurons	c-28	lamp5+ glycinergic inhibitory	neuronal cells	58	Yes
spinal cord, neurons	c-29	unassigned	mixed cell types	51	No
spinal cord, neurons	c-30	brainstem vglut2+ excitatory	neuronal cells	46	Yes
spinal cord, neurons	c-31	tfap2b+ inhibitory	neuronal cells	44	No
spinal cord, neurons	c-32	spinal peptidergic excitatory neurons	neuronal cells	36	Yes
spinal cord, neurons	c-33	spinal peptidergic excitatory neurons	neuronal cells	33	Yes
spinal cord, neurons	c-34	spinal peptidergic excitatory neurons	neuronal cells	26	Yes
spinal cord, neurons	c-35	brainstem vglut2+ excitatory	neuronal cells	20	Yes
spinal cord, non-neuronal	c-1	oligodendrocytes	glial cells	2941	Yes
spinal cord, non-neuronal	c-2	oligodendrocytes	glial cells	2524	Yes
spinal cord, non-neuronal	c-3	oligodendrocytes	glial cells	2285	Yes
spinal cord, non-neuronal	c-4	oligodendrocytes	glial cells	2166	Yes
spinal cord, non-neuronal	c-5	oligodendrocyte progenitor cells	glial cells	1846	Yes
spinal cord, non-neuronal	c-6	oligodendrocytes	glial cells	1579	Yes
spinal cord, non-neuronal	c-7	microglia	glial cells	1454	Yes
spinal cord, non-neuronal	c-8	astrocytes	glial cells	1158	Yes
spinal cord, non-neuronal	c-9	astrocytes	glial cells	969	Yes
spinal cord, non-neuronal	c-10	astrocytes	glial cells	306	Yes
spinal cord, non-neuronal	c-11	lymphocytes	blood and immune cells	220	Yes
spinal cord, non-neuronal	c-12	vascular endothelial cells	endothelial and mural cells	214	Yes
spinal cord, non-neuronal	c-13	microglia	glial cells	199	Yes
spinal cord, non-neuronal	c-14	ependymal cells	ciliated cells	137	Yes
spinal cord, non-neuronal	c-15	oligodendrocyte progenitor cells	glial cells	125	No
spinal cord, non-neuronal	c-16	pericytes	endothelial and mural cells	86	No
spinal cord, non-neuronal	c-17	fibroblasts	mesenchymal cells	68	Yes
spinal cord, non-neuronal	c-18	oligodendrocytes	glial cells	40	Yes
spinal cord, non-neuronal	c-19	macrophages & monocytes	blood and immune cells	31	Yes
spinal cord, non-neuronal	c-20	schwann cells	glial cells	5	No
thalamus, neurons	c-1	unassigned	mixed cell types	11722	No
thalamus, neurons	c-2	midbrain derived inhibitory neurons	neuronal cells	11394	Yes
thalamus, neurons	c-3	midbrain derived inhibitory neurons	neuronal cells	11046	Yes
thalamus, neurons	c-4	midbrain derived inhibitory neurons	neuronal cells	10815	Yes
thalamus, neurons	c-5	midbrain derived inhibitory neurons	neuronal cells	8733	Yes
thalamus, neurons	c-6	thalamic projection neurons	neuronal cells	8048	Yes
thalamus, neurons	c-7	midbrain derived inhibitory neurons	neuronal cells	8045	Yes
thalamus, neurons	c-8	midbrain derived inhibitory neurons	neuronal cells	7813	Yes
thalamus, neurons	c-9	thalamic projection neurons	neuronal cells	7785	Yes
thalamus, neurons	c-10	midbrain derived inhibitory neurons	neuronal cells	7688	Yes
thalamus, neurons	c-11	midbrain derived inhibitory neurons	neuronal cells	7604	Yes
thalamus, neurons	c-12	thalamic projection neurons	neuronal cells	7548	Yes
thalamus, neurons	c-13	midbrain derived inhibitory neurons	neuronal cells	7039	Yes
thalamus, neurons	c-14	thalamic projection neurons	neuronal cells	6561	Yes
thalamus, neurons	c-15	thalamic projection neurons	neuronal cells	6229	Yes
thalamus, neurons	c-16	thalamic projection neurons	neuronal cells	5735	Yes
thalamus, neurons	c-17	midbrain derived inhibitory neurons	neuronal cells	5290	Yes
thalamus, neurons	c-18	thalamic projection neurons	neuronal cells	5152	Yes
thalamus, neurons	c-19	thalamic projection neurons	neuronal cells	4939	Yes
thalamus, neurons	c-20	thalamic projection neurons	neuronal cells	4635	Yes
thalamus, neurons	c-21	other inhibitory	neuronal cells	4593	Yes
thalamus, neurons	c-22	thalamic projection neurons	neuronal cells	3145	Yes
thalamus, neurons	c-23	thalamic projection neurons	neuronal cells	3125	Yes
thalamus, neurons	c-24	other inhibitory	neuronal cells	3123	Yes
thalamus, neurons	c-25	cge derived interneurons	neuronal cells	3067	Yes
thalamus, neurons	c-26	msn-like neurons	neuronal cells	3010	Yes
thalamus, neurons	c-27	midbrain derived inhibitory neurons	neuronal cells	2612	Yes
thalamus, neurons	c-28	thalamic projection neurons	neuronal cells	2550	Yes
thalamus, neurons	c-29	thalamic projection neurons	neuronal cells	2533	Yes
thalamus, neurons	c-30	thalamic projection neurons	neuronal cells	2414	Yes
thalamus, neurons	c-31	thalamic projection neurons	neuronal cells	2326	Yes
thalamus, neurons	c-32	thalamic projection neurons	neuronal cells	2105	Yes
thalamus, neurons	c-33	midbrain derived inhibitory neurons	neuronal cells	2100	Yes
thalamus, neurons	c-34	thalamic projection neurons	neuronal cells	2066	Yes
thalamus, neurons	c-35	midbrain–hindbrain inhibitory neurons	neuronal cells	1936	Yes
thalamus, neurons	c-36	cholinergic	neuronal cells	1813	Yes
thalamus, neurons	c-37	thalamic projection neurons	neuronal cells	1808	Yes
thalamus, neurons	c-38	subcortical vglut2+ excitatory	neuronal cells	1677	No
thalamus, neurons	c-39	thalamic projection neurons	neuronal cells	1427	Yes
thalamus, neurons	c-40	cge derived interneurons	neuronal cells	1372	Yes
thalamus, neurons	c-41	msn-like neurons	neuronal cells	1264	Yes
thalamus, neurons	c-42	thalamic projection neurons	neuronal cells	1050	Yes
thalamus, neurons	c-43	thalamic projection neurons	neuronal cells	955	Yes
thalamus, neurons	c-44	other inhibitory	neuronal cells	904	Yes
thalamus, neurons	c-45	thalamic projection neurons	neuronal cells	873	Yes
thalamus, neurons	c-46	midbrain derived inhibitory neurons	neuronal cells	571	Yes
thalamus, neurons	c-47	other excitatory neurons	neuronal cells	478	Yes
thalamus, neurons	c-48	midbrain–hindbrain inhibitory neurons	neuronal cells	312	Yes
thalamus, neurons	c-49	pvalb+ excitatory neurons	neuronal cells	218	Yes
thalamus, neurons	c-50	neurosecretory	neuronal cells	204	Yes
thalamus, neurons	c-51	upper rhombic lip-derived neurons	neuronal cells	131	No
thalamus, neurons	c-52	unassigned	mixed cell types	49	No
thalamus, non-neuronal	c-1	oligodendrocytes	glial cells	18520	Yes
thalamus, non-neuronal	c-2	oligodendrocytes	glial cells	15153	Yes
thalamus, non-neuronal	c-3	oligodendrocytes	glial cells	12737	Yes
thalamus, non-neuronal	c-4	oligodendrocytes	glial cells	12462	Yes
thalamus, non-neuronal	c-5	oligodendrocytes	glial cells	12443	Yes
thalamus, non-neuronal	c-6	oligodendrocyte progenitor cells	glial cells	10456	Yes
thalamus, non-neuronal	c-7	oligodendrocytes	glial cells	8729	Yes
thalamus, non-neuronal	c-8	microglia	glial cells	7898	Yes
thalamus, non-neuronal	c-9	oligodendrocytes	glial cells	7834	Yes
thalamus, non-neuronal	c-10	astrocytes	glial cells	5517	Yes
thalamus, non-neuronal	c-11	astrocytes	glial cells	4756	Yes
thalamus, non-neuronal	c-12	astrocytes	glial cells	3055	Yes
thalamus, non-neuronal	c-13	oligodendrocytes	glial cells	2457	Yes
thalamus, non-neuronal	c-14	fibroblasts	mesenchymal cells	2413	Yes
thalamus, non-neuronal	c-15	oligodendrocytes	glial cells	2246	Yes
thalamus, non-neuronal	c-16	pericytes	endothelial and mural cells	1158	Yes
thalamus, non-neuronal	c-17	vascular endothelial cells	endothelial and mural cells	633	Yes
thalamus, non-neuronal	c-18	ependymal cells	ciliated cells	485	Yes
thalamus, non-neuronal	c-19	lymphocytes	blood and immune cells	377	Yes
thalamus, non-neuronal	c-20	astrocytes	glial cells	285	Yes
thalamus, non-neuronal	c-21	vascular smooth muscle cells	endothelial and mural cells	283	Yes
thalamus, non-neuronal	c-22	macrophages & monocytes	blood and immune cells	280	Yes
thalamus, non-neuronal	c-23	oligodendrocyte progenitor cells	glial cells	190	Yes
thalamus, non-neuronal	c-24	fibroblasts	mesenchymal cells	148	Yes
thalamus, non-neuronal	c-25	macrophages & monocytes	blood and immune cells	89	Yes
thalamus, non-neuronal	c-26	oligodendrocytes	glial cells	83	Yes
thalamus, non-neuronal	c-27	choroid plexus epithelial cells	ciliated cells	27	Yes
thalamus, non-neuronal	c-28	oligodendrocyte progenitor cells	glial cells	25	Yes
thalamus, non-neuronal	c-29	mixed cells	mixed cell types	12	No
thalamus, non-neuronal	c-30	leukocytes	mixed cell types	11	No
thalamus, non-neuronal	c-31	oligodendrocyte progenitor cells	glial cells	6	No