CYP51A1
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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • CYP51A1
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:76.3 nTPM
HPA Brain:127.8 nTPM
GTEx:76.3 nTPM
FANTOM5:97.2 Scaled Tags Per Million
Macaque:81.5 nTPM
Mouse:46.8 nTPM
Pig:171.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 1981
Sample Intensity
Spinal cord_01
ND
Spinal cord_02
ND
Spinal cord_03
1870
Spinal cord_04
1980
Spinal cord_05
1556
Spinal cord_06
2091
Spinal cord_07
ND
Spinal cord_08
1991

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.8
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 120.8
2734 Male, age 80, both hemispheres 125.9
2819 Male, age 47, both hemispheres 125.1
2818 Female, age 79, both hemispheres 119.2
2193 Male, age 75, both hemispheres 112.9
Cervical spinal cord, central gray
nTPM: 85.1
1981 Female, age 72, midline 116.3
2048 Male, age 55, midline 97.2
2816 Male, age 47, midline 82.1
2194 Female, age 79, both hemispheres 76.5
2565 Male, age 75, midline 53.3
Cervical spinal cord, dorsal horn
nTPM: 107.4
2296 Male, age 66, both hemispheres 181.4
2173 Female, age 72, unknown 139.3
2069 Male, age 47, both hemispheres 118.1
2297 Male, age 75, both hemispheres 81.9
1877 Male, age 55, unknown 76.0
2721 Male, age 90, both hemispheres 47.8
Cervical spinal cord, ventral horn
nTPM: 84.8
2098 Female, age 72, unknown 118.6
2068 Male, age 55, unknown 94.5
2480 Male, age 75, both hemispheres 85.7
2295 Male, age 66, both hemispheres 72.6
2809 Male, age 90, both hemispheres 70.2
2820 Female, age 79, both hemispheres 67.3
Dorsal funiculus (white matter)
nTPM: 127.8
2810 Male, age 90, both hemispheres 155.0
2812 Male, age 66, both hemispheres 142.0
2128 Male, age 75, both hemispheres 129.2
2064 Female, age 79, both hemispheres 111.1
2817 Male, age 47, both hemispheres 101.5
Lateral funiculus (white matter)
nTPM: 117.9
2099 Male, age 90, both hemispheres 207.7
2094 Female, age 79, both hemispheres 120.0
2192 Male, age 75, both hemispheres 85.9
2294 Male, age 66, both hemispheres 58.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 76.3
Samples: 204

Max nTPM: 162.1
Min nTPM: 16.2
Std nTPM: 28.3
Median nTPM: 72.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 162.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 153.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 144.3
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 143.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 142.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 141.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 138.6
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 137.9
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 136.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 135.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 131.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 130.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 125.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 125.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 119.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 118.9
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 117.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 117.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 116.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 115.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 114.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 114.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 113.3
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 112.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 111.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 110.5
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 110.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 109.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 108.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 108.6
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 108.2
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 108.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 107.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 107.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 104.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 104.7
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 100.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 99.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 99.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 98.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 98.5
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 97.4
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 96.7
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 96.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 96.0
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 95.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 95.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 95.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 94.5
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 94.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 93.9
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 93.0
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 92.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 92.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 91.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 91.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 91.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 91.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 91.3
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 89.4
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 89.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 88.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 88.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 88.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 87.5
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 87.2
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 86.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 86.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 86.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 84.7
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 84.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 83.8
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 83.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 83.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 83.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 83.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 82.9
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 82.7
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 82.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 81.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 81.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 81.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 80.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 80.0
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 80.0
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 79.7
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 79.5
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 78.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 78.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 77.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 77.9
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 77.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 77.1
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 75.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 75.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 75.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 75.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 73.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 73.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 73.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 72.7
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 72.5
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 72.0
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 71.8
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 71.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 71.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 71.1
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 70.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 70.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 69.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 69.0
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 68.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 68.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 68.0
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 67.4
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 67.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 66.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 66.6
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 66.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 66.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 65.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 65.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 65.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 65.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 65.1
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 65.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 64.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 64.3
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 64.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 64.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 62.9
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 62.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 62.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 62.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 62.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 62.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 62.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 62.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 61.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 60.8
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 60.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 59.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 59.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 59.5
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 59.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 59.1
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 58.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 58.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 58.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 58.4
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 57.6
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 57.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 57.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 56.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 55.0
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 54.9
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 54.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 54.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 54.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 53.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 52.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 52.7
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 52.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 51.1
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 51.1
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 50.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 50.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 48.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 48.1
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 48.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 47.5
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 47.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 47.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 46.1
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 45.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 45.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 44.9
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 44.5
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 43.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 43.4
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 43.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 42.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 42.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 41.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 41.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 40.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 39.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 39.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 39.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 38.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 38.5
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 38.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 38.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 37.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 34.9
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 34.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 33.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 30.6
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 29.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 28.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 28.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 27.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 24.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 16.2
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

97.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 97.2
FF:10181-103D1 60 years, female 100.1
FF:10159-103A6 76 years, female 94.3

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.5
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 62.8
Samples: 2

Max nTPM: 67.5
Min nTPM: 58.1
Sample A 67.5
Sample B 58.1
Ventral spinal cord
nTPM: 81.5
Samples: 1

Max nTPM: 81.5
Min nTPM: 81.5
Sample A 81.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 157.1
Samples: 4

Max nTPM: 184.1
Min nTPM: 124.7
Sample A Female 124.7
Sample B Female 160.3
Sample C Male 184.1
Sample D Male 159.2
Ventral spinal cord
nTPM: 171.2
Samples: 4

Max nTPM: 224.6
Min nTPM: 150.6
Sample A Female 157.9
Sample B Female 151.8
Sample C Male 150.6
Sample D Male 224.6

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.8
Mouse sample Sample description nTPM
Spinal cord
nTPM: 46.9
Samples: 4

Max nTPM: 48.1
Min nTPM: 46.0
Sample A 46.0
Sample B 48.1
Sample C 46.9
Sample D 46.4

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