We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ARF5
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • ARF5
TISSUE HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:134.0 nTPM
HPA Brain:103.8 nTPM
GTEx:134.0 nTPM
Pig:48.4 nTPM
Mouse:83.7 nTPM
Allen mouse:4.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 95.0
2226 Male, age 75, left hemisphere 108.0
1961 Female, age 42, unknown 81.9
Dorsomedial nucleus
nTPM: 84.1
1989 Male, age 62, unknown 96.9
2041 Female, age 72, unknown 83.8
2017 Female, age 42, unknown 71.5
Lateral hypothalamic area
nTPM: 103.8
2228 Male, age 66, unknown 118.8
1791 Male, age 80, right hemisphere 117.2
2271 Male, age 75, both hemispheres 104.6
2412 Male, age 62, unknown 74.7
Mammillary body
nTPM: 85.9
1923 Female, age 72, unknown 119.8
2413 Male, age 66, unknown 87.2
1834 Female, age 42, unknown 76.6
1948 Female, age 72, unknown 74.0
1945 Male, age 80, right hemisphere 71.8
Paraventricular nucleus
nTPM: 65.9
2700 Male, age 62, unknown 65.9
Preoptic area
nTPM: 77.5
1907 Male, age 80, right hemisphere 90.4
1861 Female, age 42, unknown 77.8
2414 Female, age 72, unknown 64.4
Supraoptic nucleus
nTPM: 80.0
1894 Female, age 72, unknown 82.1
2043 Male, age 62, unknown 79.9
2835 Female, age 72, unknown 78.1
Ventromedial nucleus
nTPM: 84.0
1982 Female, age 72, unknown 88.5
1822 Female, age 42, unknown 79.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 134.0
Samples: 257

Max nTPM: 314.4
Min nTPM: 42.4
Std nTPM: 32.5
Median nTPM: 130.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 314.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 264.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 255.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 232.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 221.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 220.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 212.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 207.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 204.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 200.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 199.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 195.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 194.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 192.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 190.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 181.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 180.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 179.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 174.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 173.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 172.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 172.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 172.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 172.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 171.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 171.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 168.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 168.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 167.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 167.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 167.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 166.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 165.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 164.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 164.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 164.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 162.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 161.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 160.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 160.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 159.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 159.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 159.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 157.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 157.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 156.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 156.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 156.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 156.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 154.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 154.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 153.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 153.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 153.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 152.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 152.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 151.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 151.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 151.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 150.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 150.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 149.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 149.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 148.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 148.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 148.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 146.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 146.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 146.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 146.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 145.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 145.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 145.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 145.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 144.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 144.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 144.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 144.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 144.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 143.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 143.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 143.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 143.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 143.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 143.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 142.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 142.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 142.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 142.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 141.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 141.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 141.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 141.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 140.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 140.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 139.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 139.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 139.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 139.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 138.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 138.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 138.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 137.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 137.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 137.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 137.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 137.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 136.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 135.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 135.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 135.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 134.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 134.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 133.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 133.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 133.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 133.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 133.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 133.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 132.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 132.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 132.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 132.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 131.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 131.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 130.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 130.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 130.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 130.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 130.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 130.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 129.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 129.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 129.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 129.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 128.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 128.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 128.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 128.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 128.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 128.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 128.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 127.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 127.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 127.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 126.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 126.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 126.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 125.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 125.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 125.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 125.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 125.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 125.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 124.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 124.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 123.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 122.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 122.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 121.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 121.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 121.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 120.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 120.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 120.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 120.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 119.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 119.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 119.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 119.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 118.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 118.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 118.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 117.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 117.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 117.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 117.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 116.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 116.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 116.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 116.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 115.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 115.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 115.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 115.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 115.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 114.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 114.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 114.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 113.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 113.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 113.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 113.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 113.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 113.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 113.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 112.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 112.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 112.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 111.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 111.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 111.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 110.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 109.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 109.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 108.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 108.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 108.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 107.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 107.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 107.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 106.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 106.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 106.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 106.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 106.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 105.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 105.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 105.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 105.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 105.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 104.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 104.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 104.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 103.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 103.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 102.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 102.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 102.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 101.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 100.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 100.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 100.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 100.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 98.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 98.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 98.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 97.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 96.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 96.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 96.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 95.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 95.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 94.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 93.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 91.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 91.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 89.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 87.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 86.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 84.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 83.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 69.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 68.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 68.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 64.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 42.4
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 48.4
Samples: 4

Max nTPM: 60.9
Min nTPM: 35.3
Sample A Female 60.9
Sample B Female 53.9
Sample C Male 43.5
Sample D Male 35.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 83.7
Samples: 4

Max nTPM: 90.1
Min nTPM: 78.1
Sample A Male 88.1
Sample B Male 90.1
Sample C Female 78.1
Sample D Female 78.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.2
69526791 Antisense, RP_050421_01_F05, Mouse strain C57BL/6J (56 days, male) 6.4
81600128 Antisense, RP_080306_04_E09, Mouse strain C57BL/6J (56 days, male) 2.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org