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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
49.1
nTPM
HPA Brain:
41.6
nTPM
GTEx:
49.1
nTPM
FANTOM5:
87.4
Scaled Tags Per Million
Pig:
49.2
nTPM
Mouse:
4.6
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
41.6
Sample id
Sample description
nTPM
Amygdala nTPM: 41.6
2695
Female, age 67, right hemisphere
76.3
2814
Male, age 76, right hemisphere
38.6
1987
Female, age 91, left hemisphere
36.8
2514
Male, age 75, right hemisphere
30.1
2517
Female, age 94, left hemisphere
26.2
Basal amygdala nTPM: 34.5
2609
Male, age 75, right hemisphere
54.1
2243
Female, age 91, right hemisphere
44.6
1955
Male, age 76, both hemispheres
41.0
2110
Male, age 80, left hemisphere
28.4
2685
Female, age 94, left hemisphere
22.2
2827
Female, age 67, right hemisphere
16.8
Central amygdala nTPM: 40.7
2515
Male, age 75, right hemisphere
57.7
2701
Female, age 91, right hemisphere
43.0
1905
Male, age 76, both hemispheres
39.7
2239
Male, age 80, left hemisphere
36.8
2826
Female, age 94, left hemisphere
26.6
Corticomedial amygdala nTPM: 29.4
2242
Female, age 91, right hemisphere
38.3
2240
Male, age 76, both hemispheres
36.5
2428
Male, age 75, right hemisphere
32.3
2829
Male, age 80, left hemisphere
25.7
2535
Female, age 67, right hemisphere
22.5
2429
Female, age 94, left hemisphere
20.8
Lateral amygdala nTPM: 36.6
2256
Male, age 80, left hemisphere
49.5
2255
Female, age 91, right hemisphere
47.6
2516
Male, age 75, right hemisphere
46.5
1883
Male, age 76, both hemispheres
30.4
2534
Female, age 94, left hemisphere
25.7
2830
Female, age 67, right hemisphere
20.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 49.1
Samples: 152
Max nTPM: 137.5
Min nTPM: 12.6
Std nTPM: 23.2
Median nTPM: 44.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
137.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
137.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
134.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
118.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
98.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
96.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
94.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
93.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
90.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
88.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
84.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
80.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
80.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
78.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
77.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
77.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
77.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
74.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
73.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
72.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
72.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
72.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
69.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
69.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
69.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
68.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
68.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
68.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
67.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
66.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
65.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
63.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
62.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
62.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
60.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
60.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
60.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
60.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
59.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
59.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
58.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
58.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
58.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
58.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
57.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
57.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
55.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
55.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
55.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
54.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
54.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
53.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
53.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
53.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
52.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
52.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
51.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
50.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
50.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
49.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
49.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
49.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
49.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
49.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
49.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
49.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
49.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
47.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
46.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
46.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
46.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
46.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
46.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
45.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
45.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
44.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
44.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
44.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
43.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
43.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
43.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
43.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
42.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
42.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
42.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
42.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
42.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
41.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
41.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
41.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
41.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
41.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
40.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
40.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
39.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
39.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
39.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
39.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
38.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
38.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
38.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
37.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
37.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
36.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
36.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
35.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
35.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
35.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
35.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
35.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
34.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
34.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
33.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
33.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
33.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
33.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
32.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
32.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
31.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
30.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
30.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
30.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
30.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
29.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
29.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
29.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
29.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
28.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
28.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
28.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
27.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
27.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
26.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
25.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
25.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
23.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
23.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
22.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
22.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
22.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
22.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
20.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
20.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
19.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
19.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
18.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
15.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
14.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
14.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
14.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
13.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
12.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
4.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 4.6
Samples: 4
Max nTPM: 6.6
Min nTPM: 3.0
Sample A
Male
4.2
Sample B
Male
3.0
Sample C
Female
6.6
Sample D
Female
4.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.