HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:72.2 nTPM
HPA Brain:179.9 nTPM
GTEx:72.2 nTPM
FANTOM5:181.3 Scaled Tags Per Million
Pig:104.5 nTPM
Mouse:178.0 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067983Antibody CAB017631
Glial cells Not detectedLow
Neuronal cells HighNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 179.9
Sample id Sample description nTPM
Hippocampus
nTPM: 147.6
1898 Male, age 80, left hemisphere 192.1
1855 Male, age 76, left hemisphere 171.9
2621 Female, age 67, right hemisphere 136.2
2148 Female, age 91, left hemisphere 132.4
1911 Female, age 85, right hemisphere 131.3
2529 Female, age 94, left hemisphere 121.6
Dentate gyrus
nTPM: 144.7
2010 Male, age 76, both hemispheres 179.6
1927 Female, age 91, both hemispheres 176.2
2246 Female, age 85, both hemispheres 141.5
2530 Female, age 94, left hemisphere 132.5
2528 Male, age 74, both hemispheres 127.9
2531 Female, age 67, both hemispheres 110.2
Entorhinal gyrus
nTPM: 145.2
1938 Female, age 85, left hemisphere 174.0
2764 Male, age 80, right hemisphere 162.4
1787 Male, age 76, left hemisphere 153.4
2613 Female, age 94, left hemisphere 146.0
2117 Female, age 91, right hemisphere 123.5
2686 Male, age 75, right hemisphere 112.2
Hippocampus, CA1
nTPM: 179.9
2749 Male, age 80, left hemisphere 274.7
2045 Male, age 76, both hemispheres 183.4
1873 Female, age 85, both hemispheres 178.2
2527 Male, age 74, both hemispheres 144.4
2082 Female, age 91, right hemisphere 118.8
Hippocampus, CA2
nTPM: 153.1
1892 Male, age 76, both hemispheres 201.3
1963 Male, age 80, left hemisphere 199.5
1940 Female, age 85, left hemisphere 143.2
2249 Male, age 74, both hemispheres 128.3
2113 Female, age 91, right hemisphere 124.3
2437 Female, age 94, left hemisphere 122.2
Hippocampus, CA3
nTPM: 165.4
2137 Male, age 80, left hemisphere 251.1
1867 Male, age 76, both hemispheres 186.3
2436 Male, age 74, both hemispheres 146.0
1891 Female, age 85, both hemispheres 142.9
2620 Female, age 94, left hemisphere 135.6
2861 Female, age 67, both hemispheres 130.7
Parahippocampal cortex
nTPM: 148.1
1850 Male, age 80, both hemispheres 182.3
1933 Female, age 85, both hemispheres 166.6
2245 Female, age 91, both hemispheres 155.3
2018 Male, age 76, both hemispheres 152.6
2250 Female, age 67, right hemisphere 148.2
1990 Female, age 91, right hemisphere 145.2
2532 Female, age 72, left hemisphere 139.1
2693 Female, age 94, both hemispheres 137.5
2692 Male, age 74, both hemispheres 129.1
2622 Female, age 67, right hemisphere 124.8
Perirhinal gyrus
nTPM: 178.7
1847 Female, age 91, left hemisphere 216.0
1794 Male, age 80, right hemisphere 177.7
1841 Female, age 85, right hemisphere 176.5
2521 Female, age 94, right hemisphere 167.7
2848 Male, age 76, right hemisphere 155.5
Subiculum
nTPM: 145.4
1901 Male, age 80, both hemispheres 180.8
1977 Female, age 85, both hemispheres 167.2
2042 Male, age 76, both hemispheres 148.8
2619 Male, age 74, both hemispheres 135.6
2729 Female, age 91, right hemisphere 130.3
2438 Female, age 94, left hemisphere 109.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 72.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.2
Samples: 197

Max nTPM: 128.7
Min nTPM: 43.9
Std nTPM: 16.6
Median nTPM: 67.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 128.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 126.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 123.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 118.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 111.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 110.7
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 110.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 108.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 107.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 102.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 102.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 181.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 181.3
FF:10169-103B7 60 years, female 196.2
FF:10153-102I9 76 years, female 166.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 104.5
Pig sample Sample description nTPM
Subiculum
nTPM: 101.6
Samples: 4

Max nTPM: 130.7
Min nTPM: 84.5
Sample A Female 130.7
Sample B Female 96.0
Sample C Male 95.2
Sample D Male 84.5
Dorsal hippocampus
nTPM: 104.5
Samples: 4

Max nTPM: 130.5
Min nTPM: 79.2
Sample A Female 130.5
Sample B Female 111.1
Sample C Male 97.3
Sample D Male 79.2
Entorhinal cortex
nTPM: 99.5
Samples: 4

Max nTPM: 110.1
Min nTPM: 87.1
Sample A Female 110.1
Sample B Female 101.8
Sample C Male 98.9
Sample D Male 87.1
Ventral hippocampus
nTPM: 100.8
Samples: 4

Max nTPM: 117.1
Min nTPM: 72.5
Sample A Female 105.7
Sample B Female 72.5
Sample C Male 117.1
Sample D Male 108.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 178.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 158.3
Samples: 4

Max nTPM: 195.9
Min nTPM: 137.6
Sample A Male 143.4
Sample B Male 137.6
Sample C Female 156.1
Sample D Female 195.9
Hippocampal formation
nTPM: 178.0
Samples: 4

Max nTPM: 206.5
Min nTPM: 154.2
Sample A Male 162.0
Sample B Male 189.2
Sample C Female 206.5
Sample D Female 154.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
112648612 Antisense, RP_110407_02_D01, Mouse strain C57BL/6J (56 days, male) 7.1
97 Antisense, RP_Baylor_103280, Mouse strain C57BL/6J (56 days, male) 0.9
96 Antisense, RP_Baylor_103280, Mouse strain C57BL/6J (56 days, male) 0.5
99 Sense, RPS_Baylor_37100, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org