PKD1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • PKD1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:58.0 nTPM
GTEx:11.3 nTPM
Pig:21.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.0
Sample id Sample description nTPM
Putamen
nTPM: 58.0
2466 Female, age 79, unknown 74.8
2489 Female, age 72, unknown 66.0
2647 Male, age 75, left hemisphere 63.6
1838 Male, age 80, right hemisphere 56.1
1829 Male, age 74, unknown 54.9
1937 Female, age 91, right hemisphere 49.4
2482 Female, age 94, left hemisphere 40.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 11.3
Samples: 254

Max nTPM: 71.8
Min nTPM: 1.6
Std nTPM: 6.5
Median nTPM: 10.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 71.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 29.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 26.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 25.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 23.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 23.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 22.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 22.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 21.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 20.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 20.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 20.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 20.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 20.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 20.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 19.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 19.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 19.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 19.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 19.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 19.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 19.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 18.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 18.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 18.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 18.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 18.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 18.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 18.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 18.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 18.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 18.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 17.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 17.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 17.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 17.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 17.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 17.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 17.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 17.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 17.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 17.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 17.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 16.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 16.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 16.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 16.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 16.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 16.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 15.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 15.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 15.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 15.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 15.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 15.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 15.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 15.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 15.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 15.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 15.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 15.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 15.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 14.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 14.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 14.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 14.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 14.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 14.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 14.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 14.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 14.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 14.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 14.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 13.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 13.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 13.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 13.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 13.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 13.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 13.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 13.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 13.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 13.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 13.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 13.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 13.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 13.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 12.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 12.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 12.7
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 12.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 12.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 12.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 12.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 12.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 12.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 12.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 12.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 12.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 12.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 12.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 12.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 12.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 12.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 11.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 11.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 11.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 11.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 11.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 11.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 11.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 11.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 11.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 11.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 11.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 11.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 11.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 11.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 10.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 10.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 10.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 10.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 10.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 10.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 10.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 10.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 10.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 10.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 10.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 10.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 10.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 10.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 10.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 10.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 10.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 10.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 10.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 9.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 9.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 9.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 9.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 9.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 9.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 9.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 9.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 9.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 9.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 9.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 9.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 9.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 9.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 9.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 9.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 9.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 9.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 8.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 8.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 8.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 8.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 8.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 8.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 8.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 8.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 8.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 8.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 8.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 8.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 8.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 8.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 8.0
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 8.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 7.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 7.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 7.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 7.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 7.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 7.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 7.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 7.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 7.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 7.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 7.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 7.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 7.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 6.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 6.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 6.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 6.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 6.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 6.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 6.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 6.4
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 6.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 6.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 6.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 6.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 6.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 6.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 5.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 5.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 5.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 5.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 5.5
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 5.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 5.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 5.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 5.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 5.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 5.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 5.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 5.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 5.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 5.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 4.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 4.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 4.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 4.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 4.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 4.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 4.7
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 4.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 4.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 4.5
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 4.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 4.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 4.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 4.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 4.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 3.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 3.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 3.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 3.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 3.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 3.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 3.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 3.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 3.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 3.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 3.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 3.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 2.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 2.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 2.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 2.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1.6
Show allShow less

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.0
Pig sample Sample description nTPM
Putamen
nTPM: 21.0
Samples: 3

Max nTPM: 23.7
Min nTPM: 19.7
Sample B Female 19.7
Sample C Male 19.7
Sample D Male 23.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.