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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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  • EVOLUTION

  • MASP2
EVOLUTIONARY LIVER Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Liver & Gallbladder
Evolutionary methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:452.9 nTPM
HPA:176.7 nTPM
GTEx:452.9 nTPM
FANTOM5:822.0 Scaled Tags Per Million
Macaque:508.6 nTPM
Pig:76.6 nTPM
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA029313Antibody HPA029314
Cholangiocytes LowNot detected
Hepatocytes MediumLow





LIVER - PROTEINTALKS DB MS
Median intensity 2441
Sample Intensity
Liver_01
3495
Liver_02
2975
Liver_03
3481
Liver_04
2358
Liver_05
2441
Liver_06
2278
Liver_07
2272
Liver_08
ND
Liver_09
ND
Liver_10
ND

LIVER - MANN MS
Median intensity 1218047
Replicate Intensity
Liver_01
1689985
Liver_02
1182472
Liver_03
1218047

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

176.7
N/A
Female, age 60
Liver sample 21
nTPM: 230.5
overview
Male, age 54
Liver sample 23
nTPM: 177.1
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 186.3
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 70
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 72
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 122.7
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 105.9
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 385.3
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 178
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 239.6
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

452.9
GTEx sample id Sample description nTPM
Liver
Average nTPM: 452.9
Samples: 262

Max nTPM: 1079.6
Min nTPM: 63.5
Std nTPM: 157.2
Median nTPM: 445.8
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 1079.6
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 1001.0
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 988.9
GTEX-QESD-2026-SM-447BI 20-29 years, male 857.1
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 857.0
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 856.8
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 799.4
GTEX-12696-0826-SM-5EGGE 60-69 years, male 783.0
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 768.5
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 756.3
GTEX-14JG1-1626-SM-664NH 40-49 years, male 752.7
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 731.3
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 728.2
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 697.1
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 693.0
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 688.2
GTEX-REY6-1226-SM-48FDR 60-69 years, male 663.2
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 662.4
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 660.9
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 656.5
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 655.0
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 654.0
GTEX-YECK-1926-SM-4W21H 60-69 years, male 652.7
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 650.4
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 649.4
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 645.4
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 642.1
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 631.1
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 629.1
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 626.9
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 622.1
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 619.3
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 617.5
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 615.3
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 614.8
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 614.7
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 607.3
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 603.9
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 601.3
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 597.7
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 597.4
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 596.3
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 594.0
GTEX-18465-1626-SM-7LG6N 50-59 years, male 593.5
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 588.7
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 585.0
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 584.5
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 584.3
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 584.3
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 582.4
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 581.8
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 580.3
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 577.3
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 575.3
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 573.9
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 573.4
GTEX-RN64-1826-SM-48FDV 50-59 years, male 568.6
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 566.2
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 565.6
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 564.1
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 560.6
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 559.0
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 558.8
GTEX-18A66-2026-SM-7189C 60-69 years, male 554.9
GTEX-P78B-1326-SM-3P611 40-49 years, female 554.6
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 552.6
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 551.6
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 550.9
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 548.0
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 546.9
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 546.8
GTEX-17HHE-0126-SM-79398 50-59 years, male 545.9
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 545.3
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 544.4
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 540.7
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 540.4
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 539.2
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 538.1
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 537.8
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 535.2
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 531.3
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 530.1
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 527.8
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 524.5
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 523.8
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 523.4
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 517.0
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 512.0
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 510.8
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 509.3
GTEX-1B932-1426-SM-793AN 40-49 years, female 507.6
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 506.3
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 504.0
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 503.9
GTEX-11ZUS-2526-SM-59872 30-39 years, male 503.1
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 503.0
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 501.5
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 499.7
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 497.7
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 496.1
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 495.4
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 495.2
GTEX-S33H-1626-SM-4AD68 30-39 years, male 495.1
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 494.0
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 483.5
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 477.3
GTEX-13112-1426-SM-5EGH8 50-59 years, male 475.7
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 474.6
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 472.4
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 471.5
GTEX-RU72-1426-SM-46MUF 50-59 years, female 471.5
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 471.1
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 469.4
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 468.0
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 467.7
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 465.5
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 461.8
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 460.4
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 459.2
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 457.8
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 457.4
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 455.8
GTEX-18A7A-1526-SM-72D69 50-59 years, female 454.4
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 452.9
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 452.7
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 452.4
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 450.8
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 449.2
GTEX-14E7W-1526-SM-6871X 70-79 years, male 448.6
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 447.8
GTEX-14PHX-0526-SM-664NW 50-59 years, male 447.6
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 444.0
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 442.4
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 441.7
GTEX-11GSP-0626-SM-5986T 60-69 years, female 441.3
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 435.9
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 435.2
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 434.7
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 432.1
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 431.4
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 430.3
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 430.2
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 425.5
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 423.3
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 422.4
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 421.4
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 416.5
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 416.3
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 415.8
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 415.3
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 413.4
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 411.6
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 410.3
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 409.4
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 407.5
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 406.7
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 406.2
GTEX-R53T-0326-SM-48FEC 50-59 years, female 405.4
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 404.8
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 402.6
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 401.3
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 400.2
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 399.3
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 395.7
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 395.3
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 391.6
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 389.8
GTEX-14PJO-1726-SM-68719 60-69 years, male 389.5
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 388.2
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 387.6
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 387.5
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 386.7
GTEX-QEL4-1226-SM-447A4 50-59 years, male 382.2
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 380.4
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 376.7
GTEX-13113-1326-SM-5GCOI 60-69 years, female 375.6
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 375.5
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 369.8
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 362.4
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 361.5
GTEX-Q734-0326-SM-48U15 40-49 years, female 354.7
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 354.5
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 353.9
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 353.3
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 348.6
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 348.0
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 346.8
GTEX-1399T-0826-SM-5IFES 60-69 years, male 346.1
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 345.8
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 345.6
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 345.4
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 340.9
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 336.4
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 336.2
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 334.3
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 334.1
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 333.7
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 332.0
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 332.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 330.8
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 329.7
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 328.9
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 326.8
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 322.4
GTEX-1B933-1226-SM-731DW 50-59 years, female 320.3
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 319.8
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 319.7
GTEX-111FC-1226-SM-HAV27 60-69 years, male 318.5
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 315.2
GTEX-X261-1726-SM-4PQYT 50-59 years, male 312.8
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 311.4
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 310.6
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 310.0
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 308.9
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 308.6
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 308.0
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 307.3
GTEX-O5YV-0726-SM-EV798 60-69 years, female 305.6
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 305.5
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 305.2
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 305.2
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 302.8
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 302.3
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 300.9
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 297.4
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 295.5
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 291.9
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 289.7
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 288.2
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 286.0
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 284.5
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 282.0
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 281.0
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 280.4
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 278.2
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 275.1
GTEX-S32W-1926-SM-4AD63 50-59 years, female 271.9
GTEX-17F96-1226-SM-79OK2 70-79 years, male 266.2
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 265.4
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 258.2
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 256.6
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 249.6
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 247.2
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 243.7
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 234.1
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 227.9
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 222.3
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 221.6
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 216.6
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 216.3
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 210.8
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 209.5
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 206.3
GTEX-14XAO-0226-SM-68728 60-69 years, female 206.2
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 203.1
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 194.5
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 194.1
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 190.0
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 154.5
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 133.3
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 82.7
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 63.5
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

822.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 822.0
FF:10018-101C9 64,69,70 years, mixed 822.0

LIVER - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

508.6
Macaque sample Sample description nTPM
Liver
nTPM: 508.6
Samples: 3

Max nTPM: 543.2
Min nTPM: 481.2
Sample B 543.2
Sample C 501.4
Sample D 481.2

LIVER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.6
Pig sample Sample description nTPM
Liver
nTPM: 76.6
Samples: 4

Max nTPM: 114.4
Min nTPM: 56.6
Sample A Female 65.7
Sample B Female 114.4
Sample C Male 56.6
Sample D Male 69.5

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