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BETA
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IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:9.5 nTPM
Monaco:79.3 nTPM
Schmiedel:164.9 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

9.5
HPA sample nTPM
Classical monocyte
nTPM: 9.5
Samples: 6

Max nTPM: 11.3
Min nTPM: 7.4
P10809_1003 11.1
P10809_1020 9.7
P10809_1039 7.4
P10809_1058 11.3
P10809_1080 7.9
P10809_1107 9.6
Intermediate monocyte
nTPM: 5.7
Samples: 6

Max nTPM: 10.6
Min nTPM: 2.9
P10809_1004 4.1
P10809_1023 2.9
P10809_1042 6.1
P10809_1061 10.6
P10809_1081 5.6
P10809_1108 5.0
Non-classical monocyte
nTPM: 0.0
Samples: 5

Max nTPM: 0.0
Min nTPM: 0.0
P10809_1005 0.0
P10809_1053 0.0
P10809_1072 0.0
P10809_1082 0.0
P10809_1109 0.0

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

79.3
Monaco sample nTPM
Classical monocyte
nTPM: 79.3
Samples: 4

Max nTPM: 112.7
Min nTPM: 53.6
RHH5313_R3680 59.5
RHH5221_R3593 112.7
RHH5250_R3622 91.4
RHH5279_R3651 53.6
Intermediate monocyte
nTPM: 25.0
Samples: 4

Max nTPM: 33.1
Min nTPM: 15.4
RHH5314_R3681 24.5
RHH5222_R3594 33.1
RHH5251_R3623 15.4
RHH5280_R3652 27.1
Non-classical monocyte
nTPM: 0.8
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.1
RHH5315_R3682 0.7
RHH5223_R3595 1.3
RHH5252_R3624 0.1
RHH5281_R3653 0.9

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

164.9
Schmiedel sample id TPM
Classical monocyte
TPM: 164.9
Samples: 91

Max TPM: 298.1
Min TPM: 46.5
MONOCYTES_1 298.1
MONOCYTES_2 279.4
MONOCYTES_3 275.7
MONOCYTES_4 274.8
MONOCYTES_5 272.4
MONOCYTES_6 261.6
MONOCYTES_7 252.4
MONOCYTES_8 250.9
MONOCYTES_9 248.7
MONOCYTES_10 243.9
MONOCYTES_11 243.2
MONOCYTES_12 237.7
MONOCYTES_13 237.4
MONOCYTES_14 235.8
MONOCYTES_15 233.1
MONOCYTES_16 227.9
MONOCYTES_17 226.0
MONOCYTES_18 225.7
MONOCYTES_19 224.9
MONOCYTES_20 224.8
MONOCYTES_21 219.2
MONOCYTES_22 216.5
MONOCYTES_23 214.7
MONOCYTES_24 209.5
MONOCYTES_25 208.9
MONOCYTES_26 208.5
MONOCYTES_27 208.0
MONOCYTES_28 202.9
MONOCYTES_29 199.8
MONOCYTES_30 198.5
MONOCYTES_31 188.7
MONOCYTES_32 188.1
MONOCYTES_33 184.8
MONOCYTES_34 184.3
MONOCYTES_35 183.5
MONOCYTES_36 180.6
MONOCYTES_37 179.6
MONOCYTES_38 176.1
MONOCYTES_39 170.1
MONOCYTES_40 169.1
MONOCYTES_41 167.8
MONOCYTES_42 166.1
MONOCYTES_43 165.7
MONOCYTES_44 163.8
MONOCYTES_45 163.7
MONOCYTES_46 163.4
MONOCYTES_47 162.7
MONOCYTES_48 161.8
MONOCYTES_49 160.8
MONOCYTES_50 159.9
MONOCYTES_51 158.3
MONOCYTES_52 150.4
MONOCYTES_53 149.9
MONOCYTES_54 148.0
MONOCYTES_55 145.7
MONOCYTES_56 144.8
MONOCYTES_57 143.4
MONOCYTES_58 141.1
MONOCYTES_59 140.9
MONOCYTES_60 137.7
MONOCYTES_61 134.9
MONOCYTES_62 133.0
MONOCYTES_63 131.4
MONOCYTES_64 127.5
MONOCYTES_65 126.5
MONOCYTES_66 126.2
MONOCYTES_67 121.4
MONOCYTES_68 118.6
MONOCYTES_69 118.4
MONOCYTES_70 115.4
MONOCYTES_71 109.0
MONOCYTES_72 108.5
MONOCYTES_73 107.8
MONOCYTES_74 105.0
MONOCYTES_75 101.4
MONOCYTES_76 100.5
MONOCYTES_77 99.3
MONOCYTES_78 97.5
MONOCYTES_79 88.0
MONOCYTES_80 86.6
MONOCYTES_81 83.1
MONOCYTES_82 82.8
MONOCYTES_83 81.3
MONOCYTES_84 76.8
MONOCYTES_85 76.6
MONOCYTES_86 75.7
MONOCYTES_87 75.4
MONOCYTES_88 74.9
MONOCYTES_89 65.0
MONOCYTES_90 48.8
MONOCYTES_91 46.5
Show allShow less
Non-classical monocyte
TPM: 0.1
Samples: 90

Max TPM: 1.6
Min TPM: 0.0
M2_1 1.6
M2_2 1.4
M2_3 0.4
M2_4 0.4
M2_5 0.2
M2_6 0.2
M2_7 0.2
M2_8 0.2
M2_9 0.2
M2_10 0.2
M2_11 0.2
M2_12 0.2
M2_13 0.2
M2_14 0.1
M2_15 0.1
M2_16 0.1
M2_17 0.1
M2_18 0.1
M2_19 0.1
M2_20 0.1
M2_21 0.1
M2_22 0.1
M2_23 0.1
M2_24 0.1
M2_25 0.1
M2_26 0.1
M2_27 0.1
M2_28 0.1
M2_29 0.1
M2_30 0.1
M2_31 0.1
M2_32 0.1
M2_33 0.1
M2_34 0.1
M2_35 0.1
M2_36 0.1
M2_37 0.1
M2_38 0.1
M2_39 0.1
M2_40 0.1
M2_41 0.1
M2_42 0.1
M2_43 0.1
M2_44 0.0
M2_45 0.0
M2_46 0.0
M2_47 0.0
M2_48 0.0
M2_49 0.0
M2_50 0.0
M2_51 0.0
M2_52 0.0
M2_53 0.0
M2_54 0.0
M2_55 0.0
M2_56 0.0
M2_57 0.0
M2_58 0.0
M2_59 0.0
M2_60 0.0
M2_61 0.0
M2_62 0.0
M2_63 0.0
M2_64 0.0
M2_65 0.0
M2_66 0.0
M2_67 0.0
M2_68 0.0
M2_69 0.0
M2_70 0.0
M2_71 0.0
M2_72 0.0
M2_73 0.0
M2_74 0.0
M2_75 0.0
M2_76 0.0
M2_77 0.0
M2_78 0.0
M2_79 0.0
M2_80 0.0
M2_81 0.0
M2_82 0.0
M2_83 0.0
M2_84 0.0
M2_85 0.0
M2_86 0.0
M2_87 0.0
M2_88 0.0
M2_89 0.0
M2_90 0.0
Show allShow less

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