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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Not detected
Ovarian stroma cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:3363.1 nTPM
HPA:3363.1 nTPM
GTEx:2092.8 nTPM
FANTOM5:2795.6 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA003315Antibody HPA064736Antibody CAB017118Antibody CAB068930
Follicle cells Not detected-Not detected-
Ovarian stroma cells MediumMediumLowHigh









OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3363.1
overview
Female, age 64
Ovary sample 192
nTPM: 3134.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 2313.7
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 2060.5
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 3358.4
N/A
Female, age 16
Ovary sample 3663
nTPM: 6422.6
N/A
Female, age 20
Ovary sample 3664
nTPM: 2538.2
N/A
Female, age 32
Ovary sample 3665
nTPM: 3713.7

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2092.8
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 2092.8
Samples: 193

Max nTPM: 6573.9
Min nTPM: 864.6
Std nTPM: 751.3
Median nTPM: 2002.8
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 6573.9
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 4646.8
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 4067.8
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 4034.3
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 3645.3
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 3597.3
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 3519.3
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 3495.0
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 3448.5
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 3380.0
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 3317.3
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 3270.6
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 3137.3
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 3130.3
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 3058.3
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 3040.7
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 2966.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 2957.0
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 2952.3
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 2915.1
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 2913.5
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 2908.7
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 2874.4
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 2845.8
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 2844.5
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 2825.2
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 2816.7
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 2813.7
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 2767.1
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 2738.0
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 2724.6
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 2722.5
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 2709.6
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 2695.3
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 2685.0
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 2659.6
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 2647.2
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 2641.6
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 2619.2
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 2617.2
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 2591.1
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 2584.2
GTEX-RU72-2226-SM-46MUE 50-59 years, female 2567.8
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 2563.0
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 2551.3
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 2544.3
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 2529.9
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 2527.3
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 2521.7
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 2517.4
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 2498.0
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 2489.5
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 2484.5
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 2422.8
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 2408.1
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 2386.2
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 2384.3
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 2368.1
GTEX-15EOM-1526-SM-68723 20-29 years, female 2357.3
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 2337.1
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 2336.2
GTEX-R55G-1526-SM-48FER 40-49 years, female 2336.2
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 2335.0
GTEX-14PKV-1226-SM-6871T 20-29 years, female 2331.7
GTEX-P78B-1926-SM-3P616 40-49 years, female 2326.3
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 2319.7
GTEX-18D9A-0826-SM-718C1 30-39 years, female 2318.3
GTEX-14BIN-1426-SM-664NI 50-59 years, female 2296.3
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 2279.5
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 2273.3
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 2270.9
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 2258.7
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 2252.9
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 2250.7
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 2229.7
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 2191.3
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 2190.6
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 2188.1
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 2143.0
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 2138.6
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 2133.7
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 2127.3
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 2118.6
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 2104.4
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 2101.2
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 2101.1
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 2097.1
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 2089.0
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 2082.4
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 2079.7
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 2071.5
GTEX-183WM-1926-SM-72D5F 70-79 years, female 2033.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2031.2
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 2028.5
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 2005.4
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 2002.9
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 2002.8
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 1993.8
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 1982.1
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 1976.0
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 1975.7
GTEX-S32W-1226-SM-4AD67 50-59 years, female 1965.4
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 1949.3
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 1947.7
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 1937.3
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1907.1
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 1906.6
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 1902.0
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 1880.7
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 1877.1
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 1865.9
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 1862.0
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1859.7
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 1856.9
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 1853.8
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 1849.5
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 1846.3
GTEX-QCQG-1426-SM-48U22 50-59 years, female 1844.9
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 1838.3
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 1833.7
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 1829.4
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 1829.0
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 1822.0
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 1813.5
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 1807.6
GTEX-11I78-1926-SM-59878 50-59 years, female 1796.3
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 1792.3
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 1787.5
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 1777.3
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 1772.4
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 1761.2
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 1756.5
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 1746.2
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 1705.7
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 1694.9
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 1688.6
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 1683.6
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 1680.4
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 1668.5
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 1645.4
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 1639.4
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 1635.6
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 1635.3
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 1629.7
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 1620.4
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 1610.2
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 1578.3
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 1576.1
GTEX-Q734-0726-SM-48TZP 40-49 years, female 1573.4
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 1570.6
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 1549.0
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 1544.6
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 1530.8
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 1517.7
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 1515.8
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 1513.3
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 1508.5
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 1470.6
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 1446.8
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 1437.7
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 1436.7
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 1425.6
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 1384.6
GTEX-145ME-1226-SM-5MR87 40-49 years, female 1369.3
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 1361.5
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 1342.1
GTEX-R45C-2526-SM-GRR28 60-69 years, female 1312.1
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 1310.6
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 1279.7
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 1279.2
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 1234.4
GTEX-QVJO-3126-SM-COH22 60-69 years, female 1225.2
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 1198.7
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 1186.6
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 1173.9
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 1170.9
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 1156.4
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 1147.0
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 1129.9
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 1121.1
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 1118.1
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 1100.9
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 1042.6
GTEX-14JG6-0626-SM-68716 30-39 years, female 995.7
GTEX-13SLX-2426-SM-664OM 50-59 years, female 967.6
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 939.2
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 938.7
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 917.1
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 909.4
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 894.6
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 889.4
GTEX-S341-0726-SM-4AD5R 40-49 years, female 885.9
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 864.6
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2795.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 2795.6
FF:10020-101D2 47,75,84 years, female 2795.6

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