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BETA
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  • CD22
IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
B-cells
Immune cell methods
B-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:120.7 nTPM
Monaco:863.5 nTPM
Schmiedel:966.2 TPM

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

120.7
HPA sample nTPM
Memory B-cell
nTPM: 97.9
Samples: 6

Max nTPM: 126.8
Min nTPM: 82.9
P10809_1017 126.8
P10809_1025 93.1
P10809_1044 112.0
P10809_1063 82.9
P10809_1092 88.6
P10809_1105 83.8
Naive B-cell
nTPM: 120.7
Samples: 6

Max nTPM: 132.3
Min nTPM: 85.4
P10809_1011 127.9
P10809_1029 131.0
P10809_1048 85.4
P10809_1067 116.2
P10809_1091 132.3
P10809_1104 131.4

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

863.5
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 556.9
Samples: 4

Max nTPM: 695.3
Min nTPM: 458.1
RHH5310_R3677 471.7
RHH5218_R3590 602.4
RHH5247_R3619 458.1
RHH5276_R3648 695.3
Naive B-cell
nTPM: 863.5
Samples: 4

Max nTPM: 984.6
Min nTPM: 731.8
RHH5308_R3675 731.8
RHH5216_R3588 843.5
RHH5245_R3617 984.6
RHH5274_R3646 894.1
Non-switched memory B-cell
nTPM: 573.3
Samples: 4

Max nTPM: 674.3
Min nTPM: 481.6
RHH5309_R3676 481.6
RHH5217_R3589 674.3
RHH5246_R3618 594.8
RHH5275_R3647 542.3
Plasmablast
nTPM: 5.9
Samples: 4

Max nTPM: 13.6
Min nTPM: 1.4
RHH5312_R3679 1.4
RHH5220_R3592 5.4
RHH5249_R3621 13.6
RHH5278_R3650 3.1
Switched memory B-cell
nTPM: 425.7
Samples: 4

Max nTPM: 477.2
Min nTPM: 382.4
RHH5311_R3678 403.0
RHH5219_R3591 382.4
RHH5248_R3620 477.2
RHH5277_R3649 440.3

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

966.2
Schmiedel sample id TPM
Naive B-cell
TPM: 966.2
Samples: 91

Max TPM: 1635.0
Min TPM: 425.4
B_CELL_NAIVE_1 1635.0
B_CELL_NAIVE_2 1422.6
B_CELL_NAIVE_3 1353.5
B_CELL_NAIVE_4 1297.8
B_CELL_NAIVE_5 1223.3
B_CELL_NAIVE_6 1213.1
B_CELL_NAIVE_7 1211.5
B_CELL_NAIVE_8 1162.8
B_CELL_NAIVE_9 1157.7
B_CELL_NAIVE_10 1154.3
B_CELL_NAIVE_11 1145.6
B_CELL_NAIVE_12 1129.1
B_CELL_NAIVE_13 1119.3
B_CELL_NAIVE_14 1119.0
B_CELL_NAIVE_15 1117.0
B_CELL_NAIVE_16 1115.7
B_CELL_NAIVE_17 1110.2
B_CELL_NAIVE_18 1107.8
B_CELL_NAIVE_19 1106.3
B_CELL_NAIVE_20 1101.0
B_CELL_NAIVE_21 1096.0
B_CELL_NAIVE_22 1095.7
B_CELL_NAIVE_23 1095.2
B_CELL_NAIVE_24 1087.8
B_CELL_NAIVE_25 1086.1
B_CELL_NAIVE_26 1082.5
B_CELL_NAIVE_27 1079.6
B_CELL_NAIVE_28 1077.2
B_CELL_NAIVE_29 1072.0
B_CELL_NAIVE_30 1071.9
B_CELL_NAIVE_31 1066.0
B_CELL_NAIVE_32 1064.0
B_CELL_NAIVE_33 1055.1
B_CELL_NAIVE_34 1055.0
B_CELL_NAIVE_35 1051.6
B_CELL_NAIVE_36 1048.1
B_CELL_NAIVE_37 1036.8
B_CELL_NAIVE_38 1025.5
B_CELL_NAIVE_39 1020.6
B_CELL_NAIVE_40 1019.9
B_CELL_NAIVE_41 1018.6
B_CELL_NAIVE_42 1014.0
B_CELL_NAIVE_43 1010.9
B_CELL_NAIVE_44 1002.7
B_CELL_NAIVE_45 1000.6
B_CELL_NAIVE_46 996.1
B_CELL_NAIVE_47 991.0
B_CELL_NAIVE_48 989.1
B_CELL_NAIVE_49 979.2
B_CELL_NAIVE_50 978.9
B_CELL_NAIVE_51 973.7
B_CELL_NAIVE_52 961.6
B_CELL_NAIVE_53 956.4
B_CELL_NAIVE_54 956.3
B_CELL_NAIVE_55 953.9
B_CELL_NAIVE_56 945.3
B_CELL_NAIVE_57 944.9
B_CELL_NAIVE_58 943.6
B_CELL_NAIVE_59 925.5
B_CELL_NAIVE_60 923.7
B_CELL_NAIVE_61 911.5
B_CELL_NAIVE_62 909.3
B_CELL_NAIVE_63 896.7
B_CELL_NAIVE_64 895.5
B_CELL_NAIVE_65 895.2
B_CELL_NAIVE_66 888.1
B_CELL_NAIVE_67 872.4
B_CELL_NAIVE_68 863.8
B_CELL_NAIVE_69 843.1
B_CELL_NAIVE_70 818.0
B_CELL_NAIVE_71 800.7
B_CELL_NAIVE_72 793.0
B_CELL_NAIVE_73 786.9
B_CELL_NAIVE_74 770.7
B_CELL_NAIVE_75 767.6
B_CELL_NAIVE_76 758.1
B_CELL_NAIVE_77 734.5
B_CELL_NAIVE_78 731.1
B_CELL_NAIVE_79 726.7
B_CELL_NAIVE_80 723.0
B_CELL_NAIVE_81 710.6
B_CELL_NAIVE_82 706.2
B_CELL_NAIVE_83 701.1
B_CELL_NAIVE_84 683.3
B_CELL_NAIVE_85 651.5
B_CELL_NAIVE_86 625.9
B_CELL_NAIVE_87 595.1
B_CELL_NAIVE_88 584.4
B_CELL_NAIVE_89 581.3
B_CELL_NAIVE_90 517.6
B_CELL_NAIVE_91 425.4
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