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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:44.8 nTPM
HPA Brain:128.5 nTPM
GTEx:44.8 nTPM
Pig:1.7 nTPM
Mouse:3.8 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 18.3
2226 Male, age 75, left hemisphere 23.1
1961 Female, age 42, unknown 13.5
Dorsomedial nucleus
nTPM: 55.8
2017 Female, age 42, unknown 80.4
1989 Male, age 62, unknown 65.6
2041 Female, age 72, unknown 21.3
Lateral hypothalamic area
nTPM: 71.3
2228 Male, age 66, unknown 90.7
2271 Male, age 75, both hemispheres 72.2
1791 Male, age 80, right hemisphere 71.4
2412 Male, age 62, unknown 50.9
Mammillary body
nTPM: 128.5
1945 Male, age 80, right hemisphere 177.4
1834 Female, age 42, unknown 150.5
1948 Female, age 72, unknown 129.7
1923 Female, age 72, unknown 95.5
2413 Male, age 66, unknown 89.4
Paraventricular nucleus
nTPM: 78.3
2700 Male, age 62, unknown 78.3
Preoptic area
nTPM: 70.3
2414 Female, age 72, unknown 117.7
1861 Female, age 42, unknown 73.1
1907 Male, age 80, right hemisphere 20.0
Supraoptic nucleus
nTPM: 95.1
2043 Male, age 62, unknown 130.3
1894 Female, age 72, unknown 98.6
2835 Female, age 72, unknown 56.4
Ventromedial nucleus
nTPM: 16.6
1982 Female, age 72, unknown 19.7
1822 Female, age 42, unknown 13.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 44.8
Samples: 257

Max nTPM: 232.5
Min nTPM: 2.2
Std nTPM: 39.6
Median nTPM: 32.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 232.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 221.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 210.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 175.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 172.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 151.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 149.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 146.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 146.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 144.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 133.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 131.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 131.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 131.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 128.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 120.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 118.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 118.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 116.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 115.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 105.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 105.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 104.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 101.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 100.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 100.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 99.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 99.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 97.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 96.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 94.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 93.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 91.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 88.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 86.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 84.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 81.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 81.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 80.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 79.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 78.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 78.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 76.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 75.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 69.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 69.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 68.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 68.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 67.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 67.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 65.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 64.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 63.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 63.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 62.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 60.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 60.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 59.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 59.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 58.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 58.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 58.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 57.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 55.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 55.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 55.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 55.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 55.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 54.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 53.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 52.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 51.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 51.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 50.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 50.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 49.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 48.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 48.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 48.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 47.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 46.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 46.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 46.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 44.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 44.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 43.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 43.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 43.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 42.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 42.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 42.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 42.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 42.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 42.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 41.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 41.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 41.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 41.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 41.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 40.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 40.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 40.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 39.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 39.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 38.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 38.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 38.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 38.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 38.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 37.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 36.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 36.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 36.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 36.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 36.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 35.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 35.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 35.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 35.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 35.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 35.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 34.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 34.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 34.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 33.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 33.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 33.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 32.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 32.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 32.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 31.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 30.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 30.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 30.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 30.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 30.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 29.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 29.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 29.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 29.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 28.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 28.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 28.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 27.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 27.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 27.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 27.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 26.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 26.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 26.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 25.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 25.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 25.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 25.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 24.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 24.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 24.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 24.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 23.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 23.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 23.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 23.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 23.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 23.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 22.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 22.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 22.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 22.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 21.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 21.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 21.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 21.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 20.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 20.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 20.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 20.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 20.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 20.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 20.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 19.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 19.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 19.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 19.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 19.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 19.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 19.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 19.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 19.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 18.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 18.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 18.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 18.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 18.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 17.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 17.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 17.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 16.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 16.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 16.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 16.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 16.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 16.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 16.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 15.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 15.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 15.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 15.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 15.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 15.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 15.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 15.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 15.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 14.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 14.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 14.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 14.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 14.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 13.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 13.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 13.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 13.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 13.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 13.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 13.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 12.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 12.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 12.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 12.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 12.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 12.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 11.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 11.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 11.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 11.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 11.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 11.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 11.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 11.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 11.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 11.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 10.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 10.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 10.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 10.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 10.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 10.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 9.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 9.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 9.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 8.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 8.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 7.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 6.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 6.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 6.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 5.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 2.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 1.7
Samples: 4

Max nTPM: 2.6
Min nTPM: 0.7
Sample A Female 0.7
Sample B Female 1.5
Sample C Male 2.6
Sample D Male 2.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 3.8
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.5
Sample A Male 6.2
Sample B Male 2.5
Sample C Female 2.6
Sample D Female 4.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
79544848 Antisense, RP_071101_01_A09, Mouse strain C57BL/6J (56 days, male) 0.1

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