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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • SEMA3B
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:88.6 nTPM
GTEx:80.2 nTPM
FANTOM5:34.8 Scaled Tags Per Million
Macaque:2.6 nTPM
Pig:0.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.6
Sample id Sample description nTPM
Putamen
nTPM: 88.6
2489 Female, age 72, unknown 127.2
2647 Male, age 75, left hemisphere 126.7
1829 Male, age 74, unknown 100.7
2482 Female, age 94, left hemisphere 93.2
2466 Female, age 79, unknown 78.8
1937 Female, age 91, right hemisphere 68.3
1838 Male, age 80, right hemisphere 25.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 80.2
Samples: 254

Max nTPM: 266.8
Min nTPM: 13.1
Std nTPM: 33.5
Median nTPM: 75.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 266.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 221.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 163.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 157.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 153.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 150.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 150.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 146.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 145.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 140.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 139.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 137.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 137.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 137.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 136.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 136.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 134.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 133.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 130.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 130.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 129.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 127.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 124.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 123.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 121.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 119.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 119.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 119.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 117.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 115.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 114.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 114.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 114.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 114.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 114.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 113.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 112.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 110.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 110.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 109.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 109.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 108.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 108.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 108.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 107.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 107.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 106.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 105.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 104.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 104.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 104.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 104.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 104.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 103.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 103.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 102.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 101.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 101.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 100.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 100.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 100.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 100.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 99.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 99.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 99.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 99.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 98.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 98.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 97.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 97.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 96.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 96.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 96.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 95.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 95.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 95.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 95.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 95.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 95.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 94.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 94.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 94.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 92.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 92.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 92.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 91.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 91.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 90.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 90.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 89.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 89.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 89.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 89.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 87.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 87.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 87.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 86.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 86.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 86.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 86.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 86.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 85.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 84.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 84.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 84.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 84.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 84.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 83.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 83.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 83.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 82.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 81.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 81.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 80.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 80.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 80.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 80.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 80.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 80.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 79.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 79.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 78.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 78.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 76.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 76.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 75.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 75.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 74.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 74.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 73.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 73.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 73.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 72.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 72.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 72.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 72.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 72.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 72.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 70.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 70.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 69.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 69.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 69.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 69.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 69.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 69.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 69.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 69.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 68.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 68.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 68.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 68.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 68.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 68.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 67.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 67.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 67.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 67.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 67.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 67.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 66.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 66.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 66.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 66.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 66.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 66.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 66.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 65.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 65.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 65.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 65.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 65.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 63.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 63.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 63.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 63.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 62.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 61.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 61.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 61.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 61.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 60.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 60.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 60.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 60.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 60.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 60.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 59.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 58.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 58.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 58.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 58.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 58.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 58.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 57.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 56.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 55.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 55.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 54.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 54.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 53.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 53.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 53.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 52.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 52.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 52.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 52.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 51.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 50.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 50.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 50.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 49.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 49.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 48.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 48.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 47.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 47.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 46.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 46.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 45.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 45.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 44.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 44.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 43.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 43.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 42.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 42.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 41.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 40.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 39.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 38.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 37.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 37.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 36.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 36.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 35.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 33.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 33.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 32.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 32.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 32.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 31.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 31.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 31.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 30.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 28.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 25.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 25.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 23.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 21.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 20.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 16.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 13.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

34.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 34.8
FF:10176-103C5 60 years, female 34.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.6
Macaque sample Sample description nTPM
Putamen
nTPM: 2.6
Samples: 2

Max nTPM: 2.7
Min nTPM: 2.4
Sample A 2.4
Sample B 2.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.7
Pig sample Sample description nTPM
Putamen
nTPM: 0.7
Samples: 3

Max nTPM: 0.8
Min nTPM: 0.6
Sample B Female 0.6
Sample C Male 0.8
Sample D Male 0.6

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