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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:52.8 nTPM
HPA Brain:55.5 nTPM
GTEx:52.8 nTPM
Pig:50.9 nTPM
Mouse:34.8 nTPM
Allen mouse:12.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 55.5
2226 Male, age 75, left hemisphere 58.6
1961 Female, age 42, unknown 52.4
Dorsomedial nucleus
nTPM: 53.6
2041 Female, age 72, unknown 56.4
2017 Female, age 42, unknown 53.4
1989 Male, age 62, unknown 51.0
Lateral hypothalamic area
nTPM: 47.8
2412 Male, age 62, unknown 52.2
2271 Male, age 75, both hemispheres 47.1
1791 Male, age 80, right hemisphere 46.3
2228 Male, age 66, unknown 45.4
Mammillary body
nTPM: 54.6
1834 Female, age 42, unknown 57.1
1945 Male, age 80, right hemisphere 57.0
1948 Female, age 72, unknown 54.9
1923 Female, age 72, unknown 52.6
2413 Male, age 66, unknown 51.3
Paraventricular nucleus
nTPM: 53.1
2700 Male, age 62, unknown 53.1
Preoptic area
nTPM: 52.0
1861 Female, age 42, unknown 54.8
2414 Female, age 72, unknown 53.6
1907 Male, age 80, right hemisphere 47.4
Supraoptic nucleus
nTPM: 51.1
2835 Female, age 72, unknown 58.5
2043 Male, age 62, unknown 52.3
1894 Female, age 72, unknown 42.5
Ventromedial nucleus
nTPM: 48.1
1822 Female, age 42, unknown 50.4
1982 Female, age 72, unknown 45.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 52.8
Samples: 257

Max nTPM: 99.0
Min nTPM: 29.6
Std nTPM: 8.9
Median nTPM: 51.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 99.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 98.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 94.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 82.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 78.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 71.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 70.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 69.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 68.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 67.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 67.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 66.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 66.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 66.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 65.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 65.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 65.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 64.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 64.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 64.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 63.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 63.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 63.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 63.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 62.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 62.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 62.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 62.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 62.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 61.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 61.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 61.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 61.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 60.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 60.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 60.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 60.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 60.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 60.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 59.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 59.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 59.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 59.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 59.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 59.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 59.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 59.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 58.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 58.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 58.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 58.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 58.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 57.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 57.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 57.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 57.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 57.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 57.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 57.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 57.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 56.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 56.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 56.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 56.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 56.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 56.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 56.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 56.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 56.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 56.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 56.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 55.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 55.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 55.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 55.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 55.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 55.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 55.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 55.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 55.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 55.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 55.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 55.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 55.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 54.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 54.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 54.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 54.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 54.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 54.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 54.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 54.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 54.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 54.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 54.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 54.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 54.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 54.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 54.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 53.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 53.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 53.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 53.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 53.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 53.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 53.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 53.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 53.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 52.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 52.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 52.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 52.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 52.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 52.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 52.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 52.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 52.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 52.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 52.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 52.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 52.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 52.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 52.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 52.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 52.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 51.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 51.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 51.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 51.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 51.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 51.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 51.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 51.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 51.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 51.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 51.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 51.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 51.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 51.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 51.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 51.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 51.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 51.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 51.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 50.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 50.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 50.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 50.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 50.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 50.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 50.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 50.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 50.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 50.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 50.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 50.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 50.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 50.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 50.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 49.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 49.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 49.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 49.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 49.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 49.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 49.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 49.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 49.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 49.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 49.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 49.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 49.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 49.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 49.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 49.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 49.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 49.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 49.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 49.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 49.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 49.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 48.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 48.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 48.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 48.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 48.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 48.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 48.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 48.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 48.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 48.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 48.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 48.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 48.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 48.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 48.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 48.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 47.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 47.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 47.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 47.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 47.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 47.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 47.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 47.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 47.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 47.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 47.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 46.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 46.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 46.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 46.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 46.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 46.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 46.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 46.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 46.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 46.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 46.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 45.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 45.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 45.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 45.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 44.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 44.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 44.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 44.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 44.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 44.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 43.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 43.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 43.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 43.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 42.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 42.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 42.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 42.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 42.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 41.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 41.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 41.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 41.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 40.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 40.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 40.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 40.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 39.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 39.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 39.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 39.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 37.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 35.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 33.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 33.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 32.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 30.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 29.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 50.9
Samples: 4

Max nTPM: 58.2
Min nTPM: 40.6
Sample A Female 58.2
Sample B Female 54.1
Sample C Male 50.5
Sample D Male 40.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 34.8
Samples: 4

Max nTPM: 37.3
Min nTPM: 31.8
Sample A Male 37.3
Sample B Male 34.5
Sample C Female 31.8
Sample D Female 35.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 12.5
69407086 Antisense, RP_050412_02_H02, Mouse strain C57BL/6J (56 days, male) 12.5

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