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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • EVOLUTION

  • CALCOCO1
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:52.3 nTPM
HPA Brain:50.1 nTPM
GTEx:52.3 nTPM
FANTOM5:38.4 Scaled Tags Per Million
Macaque:44.5 nTPM
Mouse:26.1 nTPM
Rat:31.1 nTPM
Pig:63.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 3199
Sample Intensity
Spinal cord_01
1875
Spinal cord_02
ND
Spinal cord_03
3352
Spinal cord_04
3199
Spinal cord_05
3300
Spinal cord_06
1963
Spinal cord_07
3009
Spinal cord_08
5229

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.1
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 48.5
2734 Male, age 80, both hemispheres 51.7
2193 Male, age 75, both hemispheres 49.3
2819 Male, age 47, both hemispheres 48.6
2818 Female, age 79, both hemispheres 44.6
Cervical spinal cord, central gray
nTPM: 48.4
1981 Female, age 72, midline 49.4
2194 Female, age 79, both hemispheres 49.2
2816 Male, age 47, midline 48.9
2565 Male, age 75, midline 48.6
2048 Male, age 55, midline 45.8
Cervical spinal cord, dorsal horn
nTPM: 47.0
2296 Male, age 66, both hemispheres 52.0
2297 Male, age 75, both hemispheres 47.0
2721 Male, age 90, both hemispheres 47.0
2173 Female, age 72, unknown 45.9
2069 Male, age 47, both hemispheres 45.5
1877 Male, age 55, unknown 44.5
Cervical spinal cord, ventral horn
nTPM: 48.1
2820 Female, age 79, both hemispheres 54.9
2068 Male, age 55, unknown 53.9
2098 Female, age 72, unknown 49.7
2295 Male, age 66, both hemispheres 44.5
2480 Male, age 75, both hemispheres 43.3
2809 Male, age 90, both hemispheres 42.7
Dorsal funiculus (white matter)
nTPM: 50.1
2810 Male, age 90, both hemispheres 51.8
2812 Male, age 66, both hemispheres 51.6
2817 Male, age 47, both hemispheres 50.9
2128 Male, age 75, both hemispheres 48.7
2064 Female, age 79, both hemispheres 47.6
Lateral funiculus (white matter)
nTPM: 48.2
2099 Male, age 90, both hemispheres 52.2
2192 Male, age 75, both hemispheres 48.3
2094 Female, age 79, both hemispheres 47.0
2294 Male, age 66, both hemispheres 45.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 52.3
Samples: 204

Max nTPM: 89.4
Min nTPM: 26.9
Std nTPM: 9.2
Median nTPM: 51.7
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 89.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 88.1
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 80.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 78.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 74.6
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 73.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 72.7
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 72.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 70.6
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 70.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 68.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 67.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 65.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 65.2
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 65.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 64.9
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 64.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 64.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 64.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 63.9
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 63.3
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 62.9
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 62.9
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 62.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 61.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 61.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 61.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 61.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 61.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 61.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 60.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 60.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 60.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 60.2
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 60.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 60.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 59.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 58.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 58.9
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 58.7
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 58.7
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 58.6
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 58.5
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 58.5
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 58.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 58.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 58.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 57.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 57.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 57.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 57.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 57.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 56.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 56.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 56.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 56.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 55.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 55.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 55.7
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 55.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 55.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 55.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 55.3
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 55.2
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 55.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 55.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 54.8
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 54.7
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 54.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 54.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 54.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 54.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 54.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 53.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 53.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 53.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 53.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 53.3
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 53.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 53.2
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 53.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 53.0
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 52.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 52.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 52.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 52.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 52.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 52.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 52.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 52.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 52.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 52.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 52.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 52.5
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 52.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 52.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 52.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 52.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 52.0
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 51.9
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 51.8
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 51.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 51.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 51.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 51.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 51.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 51.3
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 51.2
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 51.2
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 51.0
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 50.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 50.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 50.5
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 50.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 50.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 50.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 50.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 49.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 49.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 49.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 49.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 49.6
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 49.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 49.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 49.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 49.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 49.2
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 49.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 49.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 48.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 48.8
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 48.8
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 48.8
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 48.8
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 48.7
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 48.5
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 48.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 48.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 48.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 48.3
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 48.2
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 48.0
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 47.9
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 47.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 47.6
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 47.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 47.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 47.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 47.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 47.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 47.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 46.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 46.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 46.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 46.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 46.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 46.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 46.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 46.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 46.0
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 45.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 45.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 44.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 44.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 44.8
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 44.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 44.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 44.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 44.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 44.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 44.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 43.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 43.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 43.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 43.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 43.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 43.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 43.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 42.7
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 42.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 42.6
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 42.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 42.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 41.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 41.7
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 41.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 41.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 40.6
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 40.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 40.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 39.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 39.7
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 38.9
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 38.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 38.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 38.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 37.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 37.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 36.2
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 35.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 35.5
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 34.4
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 31.6
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 26.9
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

38.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 38.4
FF:10159-103A6 76 years, female 46.4
FF:10181-103D1 60 years, female 30.5

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.5
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 36.8
Samples: 2

Max nTPM: 46.1
Min nTPM: 27.5
Sample A 27.5
Sample B 46.1
Ventral spinal cord
nTPM: 44.5
Samples: 1

Max nTPM: 44.5
Min nTPM: 44.5
Sample A 44.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 63.0
Samples: 4

Max nTPM: 82.6
Min nTPM: 50.3
Sample A Female 50.3
Sample B Female 55.2
Sample C Male 82.6
Sample D Male 63.9
Ventral spinal cord
nTPM: 59.9
Samples: 4

Max nTPM: 73.6
Min nTPM: 52.7
Sample A Female 54.9
Sample B Female 52.7
Sample C Male 73.6
Sample D Male 58.3

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.1
Mouse sample Sample description nTPM
Spinal cord
nTPM: 26.1
Samples: 4

Max nTPM: 29.5
Min nTPM: 23.5
Sample A 23.5
Sample B 29.5
Sample C 25.6
Sample D 25.7

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.1
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 31.2
Samples: 4

Max nTPM: 33.3
Min nTPM: 29.8
Sample A 33.3
Sample A 29.8
Sample A 31.2
Sample A 30.3

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