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DPEP1
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  • TISSUE

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  • DPEP1
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
Tissue methods
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endocrine cells: Not detected
Enterocytes: Not detected
Enterocytes - Microvilli: High
Goblet cells: Not detected
Paneth cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:364.7 nTPM
HPA:364.7 nTPM
GTEx:226.0 nTPM
FANTOM5:929.3 Scaled Tags Per Million
SMALL INTESTINE - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA009426Antibody HPA012783
Endocrine cells -Not detected
Enterocytes -Not detected
Enterocytes - Microvilli -High
Glandular cells High-
Goblet cells -Not detected
Paneth cells -Not detected





SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

364.7
overview
Male, age 65
Small intestine sample 232
nTPM: 187.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 720.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 215.4
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 335.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

226.0
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 226.0
Samples: 207

Max nTPM: 1344.6
Min nTPM: 0.0
Std nTPM: 298.4
Median nTPM: 78.7
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1344.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1226.3
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1089.3
GTEX-1HBPN-1926-SM-GA91H 50-59 years, male 1049.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 1034.8
GTEX-ZTSS-0926-SM-59865 40-49 years, male 1028.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 924.5
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 921.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 879.5
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 869.8
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 861.8
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 856.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 808.1
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 790.8
GTEX-ZV7C-1426-SM-GNTB8 50-59 years, male 771.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 755.1
GTEX-111YS-1426-SM-5GID8 60-69 years, male 743.1
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 734.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 727.9
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 725.3
GTEX-1MA7W-0726-SM-HLJQU 20-29 years, female 702.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 696.0
GTEX-YFCO-1326-SM-664NV 40-49 years, male 692.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 688.5
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 684.1
GTEX-1S831-1526-SM-HLJQS 20-29 years, male 660.1
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 657.2
GTEX-1NHNU-2526-SM-HK79M 50-59 years, male 647.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 647.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 627.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 615.0
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 610.5
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 600.8
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 596.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 574.9
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 563.1
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 545.1
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 486.3
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 483.7
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 471.2
GTEX-144GM-1026-SM-5O9AZ 20-29 years, male 463.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 447.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 442.1
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 441.5
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 429.3
GTEX-ZT9X-1026-SM-HLJS2 40-49 years, male 416.7
GTEX-X4LF-1326-SM-HLJSD 50-59 years, male 413.9
GTEX-14PKU-1626-SM-6871C 40-49 years, female 410.0
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 395.3
GTEX-1C475-1426-SM-793CH 40-49 years, female 374.6
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 368.9
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 354.9
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 343.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 341.8
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 331.1
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 325.5
GTEX-13113-1226-SM-5EGHT 60-69 years, female 320.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 319.2
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 310.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 303.8
GTEX-X3Y1-1526-SM-H6Q6X 40-49 years, male 291.7
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 279.2
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 274.9
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 272.5
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 267.2
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 263.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 250.6
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 244.7
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 221.0
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 217.1
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 216.6
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 208.7
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 208.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 193.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 193.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 185.0
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 183.8
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 177.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 177.5
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 176.5
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 175.3
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 162.6
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 162.4
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 160.9
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 150.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 146.1
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 142.5
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 137.0
GTEX-13X6H-1826-SM-5O9D1 50-59 years, female 134.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 125.0
GTEX-1MCYP-1626-SM-HLJQ5 20-29 years, female 123.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 123.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 119.6
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 113.5
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 113.2
GTEX-WHPG-1826-SM-GNTAH 50-59 years, male 105.1
GTEX-13O61-1326-SM-5KM31 60-69 years, male 102.0
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 99.6
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 97.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 90.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 82.4
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 82.3
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 80.8
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 78.7
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 76.2
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 72.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 67.4
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 65.0
GTEX-1HCUA-1726-SM-GA8Z2 50-59 years, female 63.6
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 61.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 57.7
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 53.9
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 48.5
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 38.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 37.8
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 36.4
GTEX-YJ8A-2126-SM-GQ1C7 20-29 years, male 35.9
GTEX-U8XE-2226-SM-HAUZQ 30-39 years, male 35.1
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 30.9
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 30.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 30.1
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 28.9
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 25.3
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 22.3
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 22.0
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 22.0
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 21.1
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 20.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 19.2
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 19.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 18.8
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 18.4
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 17.5
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 17.5
GTEX-1HSGN-2126-SM-GA8ZB 40-49 years, female 17.0
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 16.7
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 15.4
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 14.6
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 14.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 14.5
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 11.6
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 11.2
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 10.4
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 9.8
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 9.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 9.2
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 9.2
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 9.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 8.3
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 8.0
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 7.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 7.6
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 7.3
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 6.4
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 6.3
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 5.6
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 5.3
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 5.3
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 4.8
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 4.6
GTEX-1HKZK-2226-SM-GA91V 40-49 years, male 4.4
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 4.4
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 4.1
GTEX-183FY-1626-SM-793D8 20-29 years, male 4.0
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 3.8
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 3.7
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 3.5
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 3.5
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 3.2
GTEX-13111-1426-SM-5DUW3 50-59 years, male 2.2
GTEX-W5X1-1926-SM-GOQYX 40-49 years, female 2.1
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2.0
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1.7
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1.6
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1.5
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1.4
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1.3
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1.1
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1.1
GTEX-1M5QR-2226-SM-HLJRV 40-49 years, male 1.1
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1.0
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1.0
GTEX-1PFEY-1326-SM-HK791 30-39 years, male 1.0
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 0.8
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 0.8
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 0.7
GTEX-1RQED-2826-SM-HLJQK 60-69 years, male 0.3
GTEX-YB5K-1126-SM-H6Q6O 40-49 years, female 0.3
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 0.2
GTEX-ZPU1-1826-SM-GNTB3 40-49 years, male 0.2
GTEX-178AV-1226-SM-GOR11 40-49 years, male 0.1
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 0.1
GTEX-XPT6-1026-SM-GOQYN 20-29 years, male 0.1
GTEX-1192X-2526-SM-59868 50-59 years, male 0.0
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 0.0
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 0.0
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 0.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 0.0
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 0.0
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 0.0
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 0.0
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 0.0
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 0.0
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 0.0
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 0.0
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

929.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 929.3
FF:10024-101D6 15,40,85 years, mixed 929.3

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