HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:152.1 nTPM
HPA Brain:244.2 nTPM
GTEx:152.1 nTPM
FANTOM5:325.6 Scaled Tags Per Million
Pig:221.8 nTPM
Mouse:414.2 nTPM
Allen mouse:12.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036564Antibody HPA036565Antibody CAB033552
Glial cells HighMediumLow
Neuronal cells HighHighHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 244.2
Sample id Sample description nTPM
Hippocampus
nTPM: 182.3
1898 Male, age 80, left hemisphere 238.0
1911 Female, age 85, right hemisphere 193.0
2529 Female, age 94, left hemisphere 177.1
2621 Female, age 67, right hemisphere 168.0
1855 Male, age 76, left hemisphere 165.6
2148 Female, age 91, left hemisphere 151.9
Dentate gyrus
nTPM: 186.4
1927 Female, age 91, both hemispheres 230.7
2010 Male, age 76, both hemispheres 197.8
2246 Female, age 85, both hemispheres 191.1
2528 Male, age 74, both hemispheres 183.8
2531 Female, age 67, both hemispheres 169.0
2530 Female, age 94, left hemisphere 146.0
Entorhinal gyrus
nTPM: 193.6
1938 Female, age 85, left hemisphere 251.8
1787 Male, age 76, left hemisphere 201.5
2764 Male, age 80, right hemisphere 200.8
2117 Female, age 91, right hemisphere 179.9
2686 Male, age 75, right hemisphere 165.8
2613 Female, age 94, left hemisphere 161.8
Hippocampus, CA1
nTPM: 200.1
2749 Male, age 80, left hemisphere 247.1
1873 Female, age 85, both hemispheres 209.9
2045 Male, age 76, both hemispheres 191.0
2527 Male, age 74, both hemispheres 187.0
2082 Female, age 91, right hemisphere 165.6
Hippocampus, CA2
nTPM: 187.0
1892 Male, age 76, both hemispheres 239.1
2249 Male, age 74, both hemispheres 194.3
1963 Male, age 80, left hemisphere 185.8
1940 Female, age 85, left hemisphere 179.7
2113 Female, age 91, right hemisphere 165.3
2437 Female, age 94, left hemisphere 157.9
Hippocampus, CA3
nTPM: 190.6
2137 Male, age 80, left hemisphere 232.7
1867 Male, age 76, both hemispheres 209.6
2436 Male, age 74, both hemispheres 191.8
1891 Female, age 85, both hemispheres 190.2
2620 Female, age 94, left hemisphere 182.5
2861 Female, age 67, both hemispheres 136.7
Parahippocampal cortex
nTPM: 197.2
1850 Male, age 80, both hemispheres 272.3
1933 Female, age 85, both hemispheres 237.6
1990 Female, age 91, right hemisphere 218.9
2532 Female, age 72, left hemisphere 194.7
2250 Female, age 67, right hemisphere 193.5
2245 Female, age 91, both hemispheres 191.7
2018 Male, age 76, both hemispheres 185.7
2693 Female, age 94, both hemispheres 184.4
2692 Male, age 74, both hemispheres 151.3
2622 Female, age 67, right hemisphere 141.8
Perirhinal gyrus
nTPM: 244.2
1841 Female, age 85, right hemisphere 277.6
1794 Male, age 80, right hemisphere 266.3
1847 Female, age 91, left hemisphere 261.0
2848 Male, age 76, right hemisphere 221.7
2521 Female, age 94, right hemisphere 194.4
Subiculum
nTPM: 178.9
1977 Female, age 85, both hemispheres 211.9
1901 Male, age 80, both hemispheres 210.9
2438 Female, age 94, left hemisphere 178.8
2042 Male, age 76, both hemispheres 171.8
2619 Male, age 74, both hemispheres 151.3
2729 Female, age 91, right hemisphere 148.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 152.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 152.1
Samples: 255

Max nTPM: 371.2
Min nTPM: 68.1
Std nTPM: 35.0
Median nTPM: 148.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 371.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 245.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 241.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 232.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 224.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 220.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 217.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 215.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 211.8
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 211.1
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 210.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 325.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 325.6
FF:10169-103B7 60 years, female 421.6
FF:10153-102I9 76 years, female 229.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 221.8
Pig sample Sample description nTPM
Subiculum
nTPM: 211.2
Samples: 4

Max nTPM: 266.3
Min nTPM: 192.0
Sample A Female 266.3
Sample B Female 192.0
Sample C Male 193.3
Sample D Male 193.1
Dorsal hippocampus
nTPM: 221.8
Samples: 4

Max nTPM: 235.6
Min nTPM: 202.5
Sample A Female 235.6
Sample B Female 232.3
Sample C Male 216.8
Sample D Male 202.5
Entorhinal cortex
nTPM: 214.0
Samples: 4

Max nTPM: 244.1
Min nTPM: 187.5
Sample A Female 212.4
Sample B Female 244.1
Sample C Male 212.1
Sample D Male 187.5
Ventral hippocampus
nTPM: 195.8
Samples: 4

Max nTPM: 219.6
Min nTPM: 172.9
Sample A Female 219.6
Sample B Female 187.7
Sample C Male 172.9
Sample D Male 202.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 414.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 414.2
Samples: 4

Max nTPM: 435.9
Min nTPM: 393.0
Sample A Male 406.9
Sample B Male 435.9
Sample C Female 421.0
Sample D Female 393.0
Hippocampal formation
nTPM: 397.0
Samples: 4

Max nTPM: 470.7
Min nTPM: 354.8
Sample A Male 470.7
Sample B Male 402.4
Sample C Female 354.8
Sample D Female 359.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
67752309 Antisense, RP_040922_01_D07, Mouse strain C57BL/6J (56 days, male) 24.0
68196969 Antisense, RP_040922_01_D07, Mouse strain C57BL/6J (56 days, male) 20.2
314 Antisense, RP_Baylor_103388, Mouse strain C57BL/6J (56 days, male) 0.7

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