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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:154.1 nTPM
HPA Brain:222.6 nTPM
GTEx:154.1 nTPM
Pig:173.2 nTPM
Mouse:370.0 nTPM
Allen mouse:11.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

222.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 222.6
2226 Male, age 75, left hemisphere 251.1
1961 Female, age 42, unknown 194.1
Dorsomedial nucleus
nTPM: 189.3
2041 Female, age 72, unknown 207.6
2017 Female, age 42, unknown 188.7
1989 Male, age 62, unknown 171.7
Lateral hypothalamic area
nTPM: 209.0
2228 Male, age 66, unknown 257.3
2271 Male, age 75, both hemispheres 210.6
1791 Male, age 80, right hemisphere 201.8
2412 Male, age 62, unknown 166.3
Mammillary body
nTPM: 194.5
1923 Female, age 72, unknown 243.7
1948 Female, age 72, unknown 196.2
1945 Male, age 80, right hemisphere 184.4
2413 Male, age 66, unknown 175.2
1834 Female, age 42, unknown 173.2
Paraventricular nucleus
nTPM: 191.9
2700 Male, age 62, unknown 191.9
Preoptic area
nTPM: 195.9
1907 Male, age 80, right hemisphere 238.7
2414 Female, age 72, unknown 177.6
1861 Female, age 42, unknown 171.3
Supraoptic nucleus
nTPM: 201.8
1894 Female, age 72, unknown 242.9
2043 Male, age 62, unknown 191.4
2835 Female, age 72, unknown 171.2
Ventromedial nucleus
nTPM: 206.5
1982 Female, age 72, unknown 212.4
1822 Female, age 42, unknown 200.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

154.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 154.1
Samples: 257

Max nTPM: 264.3
Min nTPM: 89.2
Std nTPM: 31.2
Median nTPM: 152.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 264.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 263.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 244.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 241.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 234.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 227.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 222.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 222.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 219.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 212.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 211.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 205.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 205.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 202.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 202.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 199.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 197.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 197.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 196.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 195.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 195.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 195.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 195.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 194.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 194.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 192.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 191.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 190.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 190.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 190.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 189.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 189.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 189.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 188.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 188.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 186.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 186.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 185.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 185.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 183.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 183.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 183.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 180.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 180.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 180.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 179.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 179.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 178.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 178.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 178.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 178.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 177.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 177.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 177.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 177.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 176.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 176.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 175.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 175.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 175.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 174.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 173.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 172.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 171.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 171.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 171.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 171.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 171.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 171.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 171.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 170.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 170.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 170.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 170.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 170.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 170.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 170.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 169.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 169.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 169.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 168.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 167.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 167.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 167.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 167.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 166.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 166.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 166.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 166.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 165.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 165.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 165.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 164.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 164.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 164.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 164.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 163.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 163.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 163.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 162.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 162.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 161.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 161.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 161.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 161.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 160.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 160.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 160.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 159.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 159.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 159.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 159.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 159.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 158.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 157.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 157.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 156.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 156.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 155.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 155.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 155.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 155.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 154.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 154.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 154.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 154.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 153.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 153.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 152.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 152.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 152.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 151.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 151.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 150.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 150.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 150.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 149.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 149.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 149.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 149.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 148.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 148.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 148.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 148.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 148.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 147.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 147.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 146.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 145.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 145.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 145.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 145.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 145.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 144.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 144.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 144.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 144.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 143.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 143.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 143.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 142.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 142.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 142.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 142.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 142.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 142.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 142.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 141.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 141.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 140.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 140.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 140.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 139.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 139.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 139.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 138.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 138.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 137.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 136.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 136.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 136.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 136.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 136.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 135.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 135.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 135.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 134.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 134.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 134.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 133.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 133.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 132.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 132.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 131.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 130.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 130.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 130.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 130.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 130.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 128.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 128.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 128.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 127.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 127.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 127.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 127.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 127.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 127.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 127.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 126.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 125.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 125.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 125.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 125.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 124.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 123.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 123.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 123.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 122.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 121.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 121.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 120.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 120.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 118.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 118.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 117.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 117.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 117.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 117.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 117.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 114.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 114.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 114.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 113.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 111.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 111.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 110.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 110.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 109.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 107.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 106.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 105.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 104.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 102.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 101.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 101.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 100.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 100.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 99.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 99.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 98.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 97.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 97.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 97.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 97.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 91.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 89.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 173.2
Samples: 4

Max nTPM: 213.3
Min nTPM: 153.4
Sample A Female 213.3
Sample B Female 169.1
Sample C Male 156.8
Sample D Male 153.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

370.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 370.0
Samples: 4

Max nTPM: 383.5
Min nTPM: 343.2
Sample A Male 379.8
Sample B Male 373.6
Sample C Female 383.5
Sample D Female 343.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.5
67752309 Antisense, RP_040922_01_D07, Mouse strain C57BL/6J (56 days, male) 21.6
68196969 Antisense, RP_040922_01_D07, Mouse strain C57BL/6J (56 days, male) 15.4
314 Antisense, RP_Baylor_103388, Mouse strain C57BL/6J (56 days, male) 1.5

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