STMN4
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • STMN4
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:87.5 nTPM
GTEx:125.2 nTPM
FANTOM5:66.4 Scaled Tags Per Million
Macaque:98.1 nTPM
Pig:182.3 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.5
Sample id Sample description nTPM
Putamen
nTPM: 87.5
1829 Male, age 74, unknown 106.8
1937 Female, age 91, right hemisphere 104.2
2489 Female, age 72, unknown 95.5
2482 Female, age 94, left hemisphere 86.2
2466 Female, age 79, unknown 79.3
2647 Male, age 75, left hemisphere 76.9
1838 Male, age 80, right hemisphere 63.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 125.2
Samples: 254

Max nTPM: 543.3
Min nTPM: 24.2
Std nTPM: 67.4
Median nTPM: 110.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 543.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 390.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 373.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 325.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 319.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 306.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 297.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 290.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 268.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 260.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 254.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 247.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 241.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 241.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 228.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 222.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 220.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 220.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 218.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 216.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 216.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 215.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 214.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 214.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 213.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 210.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 208.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 206.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 203.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 202.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 199.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 199.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 195.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 192.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 190.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 190.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 189.1
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 188.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 186.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 186.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 184.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 184.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 180.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 179.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 176.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 176.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 176.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 174.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 173.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 169.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 167.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 166.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 165.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 164.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 164.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 164.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 163.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 157.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 155.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 153.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 153.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 151.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 150.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 149.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 148.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 146.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 145.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 145.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 144.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 144.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 143.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 143.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 142.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 142.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 141.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 140.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 140.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 140.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 140.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 139.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 139.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 139.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 138.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 137.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 137.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 136.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 135.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 135.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 134.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 134.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 133.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 131.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 130.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 128.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 128.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 127.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 126.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 125.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 125.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 125.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 125.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 125.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 124.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 123.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 123.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 123.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 123.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 122.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 122.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 122.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 121.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 121.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 121.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 119.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 119.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 118.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 117.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 117.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 116.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 116.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 115.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 113.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 112.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 111.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 111.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 111.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 110.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 109.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 109.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 109.2
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 108.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 107.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 107.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 107.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 107.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 106.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 106.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 106.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 106.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 106.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 106.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 105.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 105.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 104.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 104.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 104.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 103.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 103.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 102.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 101.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 101.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 100.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 100.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 100.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 100.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 100.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 100.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 100.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 100.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 99.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 99.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 99.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 99.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 99.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 96.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 96.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 96.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 96.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 95.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 94.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 94.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 93.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 92.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 92.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 91.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 91.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 91.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 91.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 91.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 90.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 90.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 89.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 88.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 87.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 87.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 86.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 85.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 84.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 84.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 84.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 82.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 81.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 81.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 81.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 81.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 80.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 79.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 79.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 77.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 77.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 77.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 76.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 75.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 75.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 75.2
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 74.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 74.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 74.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 74.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 74.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 74.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 71.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 70.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 70.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 68.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 67.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 64.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 64.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 62.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 62.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 61.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 60.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 60.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 59.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 59.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 57.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 57.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 56.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 55.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 55.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 52.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 50.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 50.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 49.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 48.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 47.7
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 43.4
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 42.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 39.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 39.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 38.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 37.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 37.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 37.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 32.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 31.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 31.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 29.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 26.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 25.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 25.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 24.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 24.2
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

66.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 66.4
FF:10176-103C5 60 years, female 66.4

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.1
Macaque sample Sample description nTPM
Putamen
nTPM: 98.2
Samples: 2

Max nTPM: 114.6
Min nTPM: 81.7
Sample A 81.7
Sample B 114.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

182.3
Pig sample Sample description nTPM
Putamen
nTPM: 182.3
Samples: 3

Max nTPM: 240.5
Min nTPM: 123.8
Sample B Female 123.8
Sample C Male 182.7
Sample D Male 240.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.