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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • CNTN1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:118.3 nTPM
GTEx:42.4 nTPM
FANTOM5:149.8 Scaled Tags Per Million
Macaque:126.5 nTPM
Pig:210.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.3
Sample id Sample description nTPM
Putamen
nTPM: 118.3
1829 Male, age 74, unknown 141.2
2466 Female, age 79, unknown 125.3
2482 Female, age 94, left hemisphere 123.5
2647 Male, age 75, left hemisphere 117.0
1838 Male, age 80, right hemisphere 116.9
1937 Female, age 91, right hemisphere 108.5
2489 Female, age 72, unknown 96.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 42.4
Samples: 254

Max nTPM: 98.0
Min nTPM: 7.1
Std nTPM: 16.9
Median nTPM: 38.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 98.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 94.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 94.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 88.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 88.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 85.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 85.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 83.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 83.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 81.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 80.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 77.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 77.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 77.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 76.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 76.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 76.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 74.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 72.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 71.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 69.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 69.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 68.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 68.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 68.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 66.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 65.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 65.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 65.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 64.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 64.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 63.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 63.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 62.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 62.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 61.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 61.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 61.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 59.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 57.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 57.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 57.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 57.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 57.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 57.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 57.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 57.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 55.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 54.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 54.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 54.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 53.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 53.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 53.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 52.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 52.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 52.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 51.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 50.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 50.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 50.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 50.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 49.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 49.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 49.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 49.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 49.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 49.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 48.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 48.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 48.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 48.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 48.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 47.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 47.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 47.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 47.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 47.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 47.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 47.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 46.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 46.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 46.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 45.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 45.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 45.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 45.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 45.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 45.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 44.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 44.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 44.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 44.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 44.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 44.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 44.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 44.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 43.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 43.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 43.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 43.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 43.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 43.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 43.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 42.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 42.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 42.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 42.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 42.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 42.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 41.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 41.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 41.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 41.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 41.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 41.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 40.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 40.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 40.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 40.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 39.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 39.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 39.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 39.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 39.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 39.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 38.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 38.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 38.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 38.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 38.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 38.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 37.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 37.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 37.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 37.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 37.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 37.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 37.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 37.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 37.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 37.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 37.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 36.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 36.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 36.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 36.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 36.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 36.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 36.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 36.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 36.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 36.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 36.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 36.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 35.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 35.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 35.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 35.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 35.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 35.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 35.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 35.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 34.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 34.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 34.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 34.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 34.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 34.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 34.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 33.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 33.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 33.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 33.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 32.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 32.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 32.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 32.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 32.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 32.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 31.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 31.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 31.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 31.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 31.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 31.2
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 31.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 31.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 30.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 30.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 30.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 29.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 29.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 29.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 29.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 29.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 29.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 29.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 29.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 29.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 29.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 29.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 28.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 28.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 28.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 28.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 27.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 27.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 27.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 26.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 26.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 26.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 26.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 26.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 26.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 26.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 26.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 25.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 25.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 25.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 25.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 25.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 25.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 25.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 25.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 25.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 24.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 24.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 24.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 24.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 23.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 23.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 23.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 23.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 23.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 22.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 21.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 21.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 21.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 21.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 20.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 20.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 20.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 20.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 20.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 19.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 19.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 19.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 18.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 16.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 15.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 13.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 7.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 7.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

149.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 149.8
FF:10176-103C5 60 years, female 149.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.5
Macaque sample Sample description nTPM
Putamen
nTPM: 126.5
Samples: 2

Max nTPM: 140.5
Min nTPM: 112.5
Sample A 112.5
Sample B 140.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

210.3
Pig sample Sample description nTPM
Putamen
nTPM: 210.3
Samples: 3

Max nTPM: 285.6
Min nTPM: 163.8
Sample B Female 163.8
Sample C Male 285.6
Sample D Male 181.6

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