HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:313.0 nTPM
HPA Brain:325.9 nTPM
GTEx:313.0 nTPM
FANTOM5:1131.5 Scaled Tags Per Million
Pig:107.5 nTPM
Mouse:7.9 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010592Antibody CAB002506Antibody CAB079994
Glial cells MediumLowMedium
Neuronal cells Not detectedNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 325.9
Sample id Sample description nTPM
Hippocampus
nTPM: 325.9
2621 Female, age 67, right hemisphere 546.2
1855 Male, age 76, left hemisphere 395.2
1898 Male, age 80, left hemisphere 363.8
1911 Female, age 85, right hemisphere 235.8
2148 Female, age 91, left hemisphere 215.2
2529 Female, age 94, left hemisphere 199.4
Dentate gyrus
nTPM: 249.0
2010 Male, age 76, both hemispheres 379.3
2531 Female, age 67, both hemispheres 265.1
2530 Female, age 94, left hemisphere 245.0
2246 Female, age 85, both hemispheres 226.4
2528 Male, age 74, both hemispheres 201.2
1927 Female, age 91, both hemispheres 177.0
Entorhinal gyrus
nTPM: 224.6
2117 Female, age 91, right hemisphere 367.1
1787 Male, age 76, left hemisphere 296.4
2764 Male, age 80, right hemisphere 208.3
1938 Female, age 85, left hemisphere 179.6
2613 Female, age 94, left hemisphere 177.0
2686 Male, age 75, right hemisphere 118.9
Hippocampus, CA1
nTPM: 221.3
2045 Male, age 76, both hemispheres 302.8
2082 Female, age 91, right hemisphere 262.3
1873 Female, age 85, both hemispheres 214.6
2527 Male, age 74, both hemispheres 187.2
2749 Male, age 80, left hemisphere 139.9
Hippocampus, CA2
nTPM: 260.8
1940 Female, age 85, left hemisphere 422.7
2113 Female, age 91, right hemisphere 261.1
2437 Female, age 94, left hemisphere 258.6
1892 Male, age 76, both hemispheres 233.7
1963 Male, age 80, left hemisphere 209.4
2249 Male, age 74, both hemispheres 179.5
Hippocampus, CA3
nTPM: 194.5
2861 Female, age 67, both hemispheres 293.6
1867 Male, age 76, both hemispheres 276.9
1891 Female, age 85, both hemispheres 205.9
2436 Male, age 74, both hemispheres 168.5
2137 Male, age 80, left hemisphere 144.6
2620 Female, age 94, left hemisphere 77.5
Parahippocampal cortex
nTPM: 222.8
2250 Female, age 67, right hemisphere 506.2
2018 Male, age 76, both hemispheres 385.7
2245 Female, age 91, both hemispheres 205.0
2693 Female, age 94, both hemispheres 198.2
1850 Male, age 80, both hemispheres 189.6
1990 Female, age 91, right hemisphere 175.8
2692 Male, age 74, both hemispheres 159.0
2532 Female, age 72, left hemisphere 158.6
1933 Female, age 85, both hemispheres 131.9
2622 Female, age 67, right hemisphere 118.3
Perirhinal gyrus
nTPM: 222.0
2521 Female, age 94, right hemisphere 340.6
1794 Male, age 80, right hemisphere 227.4
1841 Female, age 85, right hemisphere 185.1
2848 Male, age 76, right hemisphere 182.0
1847 Female, age 91, left hemisphere 174.9
Subiculum
nTPM: 267.6
2042 Male, age 76, both hemispheres 425.3
2729 Female, age 91, right hemisphere 325.3
2619 Male, age 74, both hemispheres 255.8
1901 Male, age 80, both hemispheres 222.8
2438 Female, age 94, left hemisphere 212.7
1977 Female, age 85, both hemispheres 163.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 313.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 313.0
Samples: 255

Max nTPM: 2151.2
Min nTPM: 30.6
Std nTPM: 232.3
Median nTPM: 259.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2151.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1035.3
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 969.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 932.5
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 928.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 917.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 881.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 878.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 873.2
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 808.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 778.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1131.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1131.5
FF:10153-102I9 76 years, female 1313.7
FF:10169-103B7 60 years, female 949.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 107.5
Pig sample Sample description nTPM
Subiculum
nTPM: 82.9
Samples: 4

Max nTPM: 117.4
Min nTPM: 46.9
Sample A Female 86.5
Sample B Female 46.9
Sample C Male 80.9
Sample D Male 117.4
Dorsal hippocampus
nTPM: 105.5
Samples: 4

Max nTPM: 154.0
Min nTPM: 56.4
Sample A Female 131.5
Sample B Female 80.1
Sample C Male 154.0
Sample D Male 56.4
Entorhinal cortex
nTPM: 83.1
Samples: 4

Max nTPM: 123.3
Min nTPM: 45.5
Sample A Female 91.6
Sample B Female 72.0
Sample C Male 123.3
Sample D Male 45.5
Ventral hippocampus
nTPM: 107.5
Samples: 4

Max nTPM: 179.6
Min nTPM: 63.0
Sample A Female 89.4
Sample B Female 63.0
Sample C Male 179.6
Sample D Male 98.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 7.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.1
Sample A Male 8.4
Sample B Male 7.3
Sample C Female 7.1
Sample D Female 8.7
Hippocampal formation
nTPM: 4.5
Samples: 4

Max nTPM: 5.6
Min nTPM: 3.5
Sample A Male 4.5
Sample B Male 4.2
Sample C Female 3.5
Sample D Female 5.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
67979029 Antisense, RP_040923_02_A10, Mouse strain C57BL/6J (56 days, male) 0.5

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