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  • TISSUE

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  • CD74
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:343.4 nTPM
HPA Brain:780.1 nTPM
GTEx:343.4 nTPM
Pig:197.2 nTPM
Mouse:11.6 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

780.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 297.4
2226 Male, age 75, left hemisphere 447.2
1961 Female, age 42, unknown 147.6
Dorsomedial nucleus
nTPM: 296.1
2041 Female, age 72, unknown 334.0
1989 Male, age 62, unknown 295.8
2017 Female, age 42, unknown 258.6
Lateral hypothalamic area
nTPM: 573.9
2271 Male, age 75, both hemispheres 1062.9
2412 Male, age 62, unknown 471.3
2228 Male, age 66, unknown 403.2
1791 Male, age 80, right hemisphere 358.1
Mammillary body
nTPM: 522.4
1834 Female, age 42, unknown 782.3
2413 Male, age 66, unknown 611.7
1945 Male, age 80, right hemisphere 414.2
1948 Female, age 72, unknown 402.0
1923 Female, age 72, unknown 401.9
Paraventricular nucleus
nTPM: 567.7
2700 Male, age 62, unknown 567.7
Preoptic area
nTPM: 252.5
2414 Female, age 72, unknown 385.0
1861 Female, age 42, unknown 251.6
1907 Male, age 80, right hemisphere 120.8
Supraoptic nucleus
nTPM: 780.1
2043 Male, age 62, unknown 977.1
1894 Female, age 72, unknown 793.9
2835 Female, age 72, unknown 569.2
Ventromedial nucleus
nTPM: 215.7
1822 Female, age 42, unknown 219.5
1982 Female, age 72, unknown 211.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

343.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 343.4
Samples: 257

Max nTPM: 1294.0
Min nTPM: 45.2
Std nTPM: 216.7
Median nTPM: 299.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 1294.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 1282.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1058.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 976.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 943.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 876.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 862.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 862.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 831.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 802.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 796.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 789.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 785.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 762.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 750.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 724.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 716.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 702.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 702.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 699.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 697.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 686.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 672.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 663.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 663.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 653.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 640.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 637.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 632.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 615.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 601.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 597.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 587.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 575.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 568.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 557.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 548.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 547.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 546.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 546.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 544.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 537.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 529.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 517.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 516.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 513.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 509.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 502.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 500.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 497.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 495.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 495.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 491.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 491.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 487.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 486.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 481.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 478.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 477.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 477.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 476.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 472.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 461.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 460.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 459.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 457.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 449.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 445.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 438.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 437.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 435.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 428.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 423.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 416.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 415.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 414.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 409.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 409.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 405.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 403.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 401.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 400.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 397.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 393.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 389.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 387.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 386.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 386.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 383.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 380.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 375.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 372.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 372.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 368.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 365.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 363.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 361.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 361.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 360.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 357.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 357.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 355.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 353.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 350.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 340.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 334.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 331.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 323.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 321.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 321.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 321.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 320.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 319.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 319.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 319.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 317.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 317.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 317.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 316.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 310.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 310.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 309.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 309.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 308.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 307.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 306.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 304.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 301.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 299.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 298.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 297.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 297.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 297.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 295.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 292.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 290.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 287.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 281.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 280.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 274.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 273.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 270.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 269.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 263.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 263.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 262.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 259.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 258.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 258.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 257.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 254.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 254.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 252.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 252.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 250.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 249.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 246.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 238.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 238.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 230.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 228.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 226.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 226.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 225.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 225.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 225.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 220.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 217.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 216.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 215.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 213.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 212.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 209.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 208.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 204.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 202.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 201.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 201.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 200.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 197.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 196.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 192.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 191.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 191.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 187.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 186.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 185.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 184.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 183.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 181.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 181.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 181.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 176.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 176.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 175.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 174.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 173.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 171.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 169.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 168.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 168.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 166.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 166.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 165.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 163.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 161.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 159.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 153.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 152.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 148.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 148.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 147.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 145.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 143.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 143.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 143.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 141.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 140.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 140.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 139.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 137.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 134.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 131.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 131.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 131.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 130.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 129.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 128.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 127.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 127.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 126.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 125.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 122.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 119.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 116.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 115.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 114.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 113.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 112.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 106.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 106.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 105.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 103.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 103.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 100.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 97.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 94.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 87.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 84.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 83.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 81.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 76.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 71.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 70.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 58.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 50.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 45.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

197.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 197.2
Samples: 4

Max nTPM: 236.9
Min nTPM: 150.8
Sample A Female 223.5
Sample B Female 236.9
Sample C Male 177.6
Sample D Male 150.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 11.7
Samples: 4

Max nTPM: 16.6
Min nTPM: 5.6
Sample A Male 16.6
Sample B Male 5.6
Sample C Female 9.2
Sample D Female 15.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.4
67979029 Antisense, RP_040923_02_A10, Mouse strain C57BL/6J (56 days, male) 0.4

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