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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

159.023
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:162.5 nTPM
HPA Brain:346.3 nTPM
GTEx:162.5 nTPM
Pig:132.9 nTPM
Mouse:230.3 nTPM
Allen mouse:15.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA023676
Hypothalamus mean intensity 159.023
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 30.417
Periventricular hypothalamic nucleus 61.303
Supraoptic nucleus 159.023
Tuberal nucleus 21.646
Ventral tuberomammillary nucleus -
Lateral preoptic area 53.188
Medial preoptic area 76.887
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus 40.778
Anterior hypothalamic area, central 66.903
Ventral medial hypothalamic nucleus 33.261
Ventral medial hypothalamic nucleus* -
Arcuate nucleus -
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 57.106
Dorsal medial hypothalamic nucleus 28.061
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

346.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 276.3
2226 Male, age 75, left hemisphere 328.6
1961 Female, age 42, unknown 224.0
Dorsomedial nucleus
nTPM: 316.4
1989 Male, age 62, unknown 572.3
2017 Female, age 42, unknown 201.1
2041 Female, age 72, unknown 175.9
Lateral hypothalamic area
nTPM: 346.3
2228 Male, age 66, unknown 440.9
2271 Male, age 75, both hemispheres 396.4
1791 Male, age 80, right hemisphere 345.8
2412 Male, age 62, unknown 201.9
Mammillary body
nTPM: 311.3
1923 Female, age 72, unknown 558.0
2413 Male, age 66, unknown 344.0
1834 Female, age 42, unknown 258.2
1948 Female, age 72, unknown 237.1
1945 Male, age 80, right hemisphere 159.2
Paraventricular nucleus
nTPM: 190.2
2700 Male, age 62, unknown 190.2
Preoptic area
nTPM: 221.1
1907 Male, age 80, right hemisphere 278.7
1861 Female, age 42, unknown 193.0
2414 Female, age 72, unknown 191.7
Supraoptic nucleus
nTPM: 171.7
1894 Female, age 72, unknown 205.5
2835 Female, age 72, unknown 184.0
2043 Male, age 62, unknown 125.6
Ventromedial nucleus
nTPM: 262.9
1982 Female, age 72, unknown 293.0
1822 Female, age 42, unknown 232.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

162.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 162.5
Samples: 257

Max nTPM: 1312.4
Min nTPM: 30.3
Std nTPM: 131.0
Median nTPM: 141.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1312.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1205.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1030.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 478.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 419.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 386.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 351.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 321.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 316.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 312.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 310.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 292.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 288.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 278.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 273.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 270.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 262.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 262.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 260.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 255.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 250.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 247.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 246.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 245.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 241.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 240.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 240.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 230.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 229.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 226.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 225.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 224.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 224.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 223.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 222.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 221.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 221.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 220.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 220.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 218.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 217.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 216.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 216.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 213.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 212.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 210.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 207.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 206.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 206.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 205.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 203.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 203.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 202.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 202.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 201.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 201.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 200.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 198.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 197.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 196.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 196.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 196.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 195.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 194.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 194.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 193.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 192.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 189.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 189.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 188.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 188.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 188.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 187.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 186.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 186.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 186.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 185.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 184.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 184.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 183.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 182.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 179.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 177.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 175.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 175.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 174.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 173.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 173.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 171.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 168.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 167.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 167.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 165.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 163.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 162.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 161.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 161.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 160.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 160.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 159.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 159.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 159.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 158.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 158.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 157.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 157.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 157.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 156.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 153.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 153.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 153.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 152.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 152.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 151.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 150.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 149.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 149.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 149.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 149.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 148.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 148.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 147.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 146.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 144.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 143.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 143.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 143.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 142.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 141.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 141.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 140.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 140.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 139.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 139.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 139.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 137.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 135.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 135.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 135.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 135.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 134.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 133.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 132.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 132.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 132.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 131.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 131.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 131.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 131.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 130.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 130.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 129.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 128.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 128.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 127.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 126.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 126.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 126.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 125.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 125.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 125.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 124.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 123.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 123.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 123.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 122.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 120.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 120.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 120.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 119.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 119.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 118.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 117.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 115.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 114.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 112.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 111.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 111.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 110.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 110.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 109.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 109.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 109.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 109.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 108.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 108.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 106.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 104.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 103.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 103.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 102.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 101.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 100.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 100.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 100.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 100.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 99.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 98.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 97.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 96.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 96.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 96.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 95.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 93.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 93.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 92.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 92.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 91.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 90.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 89.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 88.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 87.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 87.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 87.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 87.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 87.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 86.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 85.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 83.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 83.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 82.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 81.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 80.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 79.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 78.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 78.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 77.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 76.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 74.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 73.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 72.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 71.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 71.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 70.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 67.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 64.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 63.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 63.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 63.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 62.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 61.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 60.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 59.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 55.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 49.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 48.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 47.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 47.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 45.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 43.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 40.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 39.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 37.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 37.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 36.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 35.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 30.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 132.9
Samples: 4

Max nTPM: 187.4
Min nTPM: 93.1
Sample A Female 187.4
Sample B Female 133.0
Sample C Male 117.9
Sample D Male 93.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

230.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 230.3
Samples: 4

Max nTPM: 258.9
Min nTPM: 209.0
Sample A Male 241.0
Sample B Male 258.9
Sample C Female 212.1
Sample D Female 209.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 15.5
685 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 15.5
684 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 14.6

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