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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • RNF10
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:75.3 nTPM
HPA Brain:85.0 nTPM
GTEx:75.3 nTPM
FANTOM5:178.1 Scaled Tags Per Million
Macaque:58.7 nTPM
Mouse:70.8 nTPM
Rat:108.2 nTPM
Pig:125.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity ND
Sample Intensity
Spinal cord_01
ND
Spinal cord_02
ND
Spinal cord_03
ND
Spinal cord_04
ND
Spinal cord_05
ND
Spinal cord_06
ND
Spinal cord_07
ND
Spinal cord_08
ND

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.0
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 79.5
2193 Male, age 75, both hemispheres 83.8
2819 Male, age 47, both hemispheres 83.2
2818 Female, age 79, both hemispheres 80.6
2734 Male, age 80, both hemispheres 70.5
Cervical spinal cord, central gray
nTPM: 76.2
2565 Male, age 75, midline 91.1
1981 Female, age 72, midline 74.5
2194 Female, age 79, both hemispheres 73.8
2816 Male, age 47, midline 73.2
2048 Male, age 55, midline 68.3
Cervical spinal cord, dorsal horn
nTPM: 77.0
2296 Male, age 66, both hemispheres 87.2
2173 Female, age 72, unknown 81.7
2297 Male, age 75, both hemispheres 78.3
2069 Male, age 47, both hemispheres 75.7
1877 Male, age 55, unknown 74.1
2721 Male, age 90, both hemispheres 64.9
Cervical spinal cord, ventral horn
nTPM: 81.6
2480 Male, age 75, both hemispheres 92.3
2809 Male, age 90, both hemispheres 87.0
2295 Male, age 66, both hemispheres 81.3
2098 Female, age 72, unknown 78.6
2068 Male, age 55, unknown 76.9
2820 Female, age 79, both hemispheres 73.8
Dorsal funiculus (white matter)
nTPM: 85.0
2810 Male, age 90, both hemispheres 87.3
2812 Male, age 66, both hemispheres 85.0
2817 Male, age 47, both hemispheres 85.0
2064 Female, age 79, both hemispheres 83.9
2128 Male, age 75, both hemispheres 83.8
Lateral funiculus (white matter)
nTPM: 79.7
2094 Female, age 79, both hemispheres 86.7
2099 Male, age 90, both hemispheres 85.5
2192 Male, age 75, both hemispheres 76.8
2294 Male, age 66, both hemispheres 69.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 75.3
Samples: 204

Max nTPM: 152.4
Min nTPM: 45.9
Std nTPM: 18.2
Median nTPM: 72.1
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 152.4
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 143.0
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 139.1
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 134.7
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 131.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 126.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 122.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 120.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 119.6
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 109.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 109.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 107.9
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 107.6
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 106.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 105.4
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 103.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 100.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 100.7
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 99.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 98.2
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 96.9
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 96.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 95.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 94.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 93.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 93.2
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 92.9
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 92.3
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 92.1
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 91.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 90.9
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 90.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 88.9
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 88.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 87.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 87.7
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 87.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 86.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 86.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 86.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 86.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 86.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 86.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 85.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 85.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 85.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 84.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 84.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 84.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 84.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 83.5
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 83.4
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 82.5
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 82.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 81.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 81.3
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 80.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 80.6
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 80.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 80.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 80.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 79.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 79.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 79.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 79.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 79.2
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 79.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 78.4
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 78.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 78.0
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 77.9
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 77.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 77.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 77.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 77.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 76.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 76.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 76.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 76.2
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 76.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 76.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 76.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 76.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 75.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 75.2
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 75.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 74.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 74.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 74.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 74.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 74.0
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 73.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 73.6
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 73.5
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 73.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 73.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 73.0
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 72.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 72.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 72.8
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 72.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 72.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 71.9
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 71.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 71.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 71.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 71.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 70.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 70.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 70.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 70.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 70.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 70.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 70.1
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 70.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 70.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 69.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 69.3
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 69.2
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 68.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 68.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 67.8
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 67.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 67.6
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 67.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 67.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 67.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 67.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 67.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 67.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 66.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 66.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 66.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 65.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 65.7
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 65.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 65.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 65.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 65.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 65.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 65.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 65.1
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 65.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 64.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 64.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 64.6
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 64.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 64.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 64.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 64.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 64.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 64.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 64.0
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 63.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 63.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 63.1
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 62.8
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 62.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 61.7
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 61.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 61.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 61.4
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 61.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 61.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 60.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 60.8
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 60.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 60.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 59.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 59.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 59.6
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 59.6
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 59.5
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 59.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 59.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 59.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 58.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 58.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 58.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 58.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 58.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 57.5
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 56.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 56.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 56.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 56.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 56.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 55.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 54.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 54.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 54.4
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 53.7
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 53.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 52.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 52.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 52.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 51.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 51.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 49.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 49.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 48.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 47.3
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 46.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 45.9
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

178.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 178.1
FF:10181-103D1 60 years, female 210.5
FF:10159-103A6 76 years, female 145.8

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.7
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 49.1
Samples: 2

Max nTPM: 53.5
Min nTPM: 44.6
Sample A 44.6
Sample B 53.5
Ventral spinal cord
nTPM: 58.7
Samples: 1

Max nTPM: 58.7
Min nTPM: 58.7
Sample A 58.7

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 125.3
Samples: 4

Max nTPM: 142.7
Min nTPM: 110.8
Sample A Female 110.8
Sample B Female 118.5
Sample C Male 142.7
Sample D Male 129.0
Ventral spinal cord
nTPM: 116.4
Samples: 4

Max nTPM: 124.5
Min nTPM: 108.4
Sample A Female 116.8
Sample B Female 108.4
Sample C Male 116.1
Sample D Male 124.5

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.8
Mouse sample Sample description nTPM
Spinal cord
nTPM: 70.9
Samples: 4

Max nTPM: 74.8
Min nTPM: 65.8
Sample A 65.8
Sample B 74.8
Sample C 70.7
Sample D 72.1

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.2
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 108.2
Samples: 4

Max nTPM: 121.8
Min nTPM: 96.3
Sample A 106.8
Sample A 107.9
Sample A 121.8
Sample A 96.3

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