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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:85.3 nTPM
HPA Brain:83.3 nTPM
GTEx:85.3 nTPM
FANTOM5:246.2 Scaled Tags Per Million
Pig:140.8 nTPM
Mouse:136.2 nTPM
Allen mouse:8.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA052643
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 77.5
2481 Female, age 94, left hemisphere 80.8
2846 Female, age 79, unknown 79.8
2290 Female, age 72, unknown 79.4
2288 Male, age 75, left hemisphere 78.4
2289 Male, age 61, right hemisphere 77.0
1854 Male, age 80, left hemisphere 76.1
1857 Female, age 85, left hemisphere 74.5
1781 Male, age 74, unknown 73.8
Globus pallidus, externus
nTPM: 83.3
2646 Male, age 61, right hemisphere 88.2
1996 Male, age 80, right hemisphere 86.0
2772 Female, age 79, unknown 82.7
2395 Male, age 75, both hemispheres 80.4
2567 Female, age 72, unknown 78.9
Globus pallidus, internus
nTPM: 80.3
2287 Male, age 75, right hemisphere 95.2
2483 Female, age 94, right hemisphere 86.1
2778 Female, age 91, both hemispheres 79.0
2111 Female, age 85, right hemisphere 78.8
2566 Female, age 72, unknown 76.7
1818 Male, age 74, unknown 73.9
2037 Male, age 80, right hemisphere 72.7
Nucleus accumbens
nTPM: 75.9
1783 Male, age 74, unknown 86.3
1806 Female, age 85, left hemisphere 80.6
2286 Male, age 75, left hemisphere 76.8
1856 Female, age 91, right hemisphere 75.5
2391 Female, age 94, left hemisphere 74.5
2698 Female, age 72, unknown 73.6
2824 Male, age 61, right hemisphere 71.1
2732 Male, age 80, right hemisphere 68.6
Nucleus basalis of Meynert
nTPM: 77.9
2569 Male, age 61, both hemispheres 90.1
2484 Female, age 94, left hemisphere 74.3
2393 Male, age 80, right hemisphere 73.7
2821 Male, age 75, both hemispheres 73.4
Nucleus of the diagonal band
nTPM: 71.4
2775 Male, age 80, right hemisphere 78.1
1812 Female, age 91, both hemispheres 75.2
2195 Female, age 85, both hemispheres 72.0
1979 Male, age 74, unknown 70.2
2029 Male, age 61, right hemisphere 61.7
Putamen
nTPM: 78.5
2647 Male, age 75, left hemisphere 85.2
2466 Female, age 79, unknown 82.0
1829 Male, age 74, unknown 77.9
2489 Female, age 72, unknown 77.8
2482 Female, age 94, left hemisphere 76.9
1838 Male, age 80, right hemisphere 75.8
1937 Female, age 91, right hemisphere 73.9
Septal nuclei
nTPM: 71.7
2031 Female, age 72, unknown 81.0
1960 Male, age 74, unknown 78.2
2394 Male, age 61, left hemisphere 69.9
2059 Female, age 85, both hemispheres 69.7
2009 Female, age 91, both hemispheres 68.9
2199 Male, age 80, right hemisphere 68.8
2629 Female, age 94, right hemisphere 65.2
Stria terminalis, bed nucleus
nTPM: 67.0
1974 Female, age 91, both hemispheres 73.5
2201 Male, age 74, unknown 65.4
2486 Female, age 94, both hemispheres 62.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 78.2
Samples: 246

Max nTPM: 154.8
Min nTPM: 40.9
Std nTPM: 15.9
Median nTPM: 76.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 154.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 135.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 131.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 123.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 115.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 115.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 114.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 112.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 109.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 106.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 106.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 104.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 103.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 103.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 102.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 102.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 102.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 101.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 101.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 101.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 101.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 99.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 99.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 98.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 98.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 98.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 98.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 97.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 96.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 96.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 95.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 95.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 95.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 95.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 94.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 94.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 93.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 92.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 92.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 92.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 91.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 91.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 91.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 91.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 91.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 90.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 90.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 90.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 89.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 88.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 88.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 88.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 88.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 88.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 88.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 87.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 87.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 87.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 87.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 87.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 87.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 87.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 86.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 86.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 86.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 86.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 86.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 85.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 85.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 85.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 85.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 85.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 84.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 84.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 84.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 84.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 84.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 84.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 84.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 83.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 83.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 83.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 83.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 83.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 83.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 82.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 81.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 81.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 81.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 81.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 81.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 81.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 81.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 80.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 79.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 79.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 79.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 79.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 79.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 79.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 79.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 79.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 79.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 78.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 78.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 78.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 78.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 78.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 77.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 77.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 77.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 77.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 77.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 77.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 76.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 76.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 76.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 76.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 76.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 76.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 76.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 76.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 75.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 75.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 75.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 75.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 75.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 75.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 75.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 74.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 74.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 74.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 74.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 74.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 74.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 73.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 73.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 73.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 73.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 73.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 73.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 73.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 73.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 72.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 72.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 72.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 72.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 72.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 72.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 72.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 72.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 72.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 72.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 72.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 72.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 71.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 70.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 70.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 70.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 70.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 70.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 70.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 70.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 70.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 70.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 70.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 69.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 69.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 69.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 69.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 68.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 68.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 68.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 68.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 68.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 68.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 68.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 68.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 68.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 68.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 67.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 67.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 67.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 67.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 67.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 67.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 66.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 66.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 66.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 66.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 66.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 66.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 65.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 65.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 65.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 65.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 65.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 65.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 65.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 65.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 65.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 65.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 64.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 64.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 64.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 64.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 64.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 63.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 63.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 63.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 63.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 63.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 63.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 62.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 62.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 61.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 61.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 60.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 60.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 60.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 60.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 59.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 59.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 59.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 59.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 59.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 58.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 58.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 57.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 57.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 55.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 55.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 54.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 53.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 53.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 52.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 52.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 51.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 51.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 51.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 49.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 48.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 44.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 40.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 79.0
Samples: 246

Max nTPM: 142.8
Min nTPM: 43.2
Std nTPM: 16.7
Median nTPM: 76.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 142.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 136.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 136.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 135.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 135.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 134.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 123.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 119.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 118.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 116.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 115.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 113.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 113.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 111.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 110.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 109.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 107.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 107.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 101.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 101.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 99.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 98.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 98.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 98.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 97.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 97.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 96.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 96.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 96.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 95.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 94.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 94.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 93.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 93.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 93.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 93.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 93.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 93.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 92.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 92.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 91.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 91.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 90.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 90.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 90.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 89.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 89.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 89.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 89.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 89.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 88.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 88.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 88.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 88.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 87.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 87.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 87.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 87.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 87.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 87.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 85.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 85.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 85.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 85.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 85.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 85.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 85.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 85.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 84.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 84.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 84.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 84.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 84.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 84.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 83.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 83.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 83.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 83.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 83.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 83.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 83.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 82.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 82.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 82.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 82.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 82.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 81.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 81.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 81.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 81.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 81.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 81.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 81.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 81.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 81.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 80.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 80.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 80.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 80.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 80.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 80.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 80.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 80.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 80.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 80.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 80.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 80.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 79.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 79.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 79.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 78.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 78.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 78.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 78.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 77.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 77.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 77.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 77.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 77.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 77.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 77.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 76.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 76.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 76.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 76.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 76.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 76.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 76.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 75.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 75.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 75.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 75.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 75.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 75.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 75.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 75.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 75.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 75.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 74.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 74.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 74.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 74.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 74.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 73.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 73.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 73.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 73.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 73.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 73.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 72.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 72.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 72.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 72.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 72.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 72.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 72.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 72.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 72.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 72.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 72.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 71.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 71.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 71.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 71.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 71.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 71.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 71.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 71.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 70.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 70.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 70.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 70.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 70.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 70.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 70.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 69.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 69.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 69.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 69.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 69.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 69.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 68.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 68.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 68.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 68.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 68.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 67.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 67.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 67.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 67.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 66.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 66.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 66.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 66.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 65.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 65.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 65.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 65.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 65.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 65.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 65.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 65.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 64.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 64.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 64.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 64.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 64.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 63.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 63.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 63.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 63.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 62.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 62.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 62.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 62.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 62.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 62.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 61.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 61.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 61.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 61.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 61.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 60.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 60.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 60.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 60.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 59.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 59.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 59.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 59.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 59.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 58.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 58.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 58.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 57.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 57.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 55.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 55.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 54.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 54.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 52.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 50.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 49.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 47.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 44.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 43.2
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Brain - Putamen (basal ganglia)
Average nTPM: 85.3
Samples: 205

Max nTPM: 143.4
Min nTPM: 50.2
Std nTPM: 16.7
Median nTPM: 84.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 143.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 143.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 135.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 133.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 127.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 127.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 119.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 117.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 116.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 116.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 115.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 115.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 113.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 111.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 110.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 108.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 108.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 107.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 107.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 106.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 106.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 105.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 105.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 104.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 103.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 103.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 102.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 102.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 102.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 102.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 101.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 101.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 101.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 101.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 101.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 100.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 100.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 100.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 99.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 99.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 98.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 98.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 98.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 97.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 97.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 97.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 97.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 96.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 96.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 95.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 95.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 95.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 94.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 94.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 94.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 94.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 93.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 93.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 93.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 92.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 92.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 91.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 91.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 91.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 91.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 91.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 91.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 90.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 90.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 89.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 89.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 89.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 89.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 89.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 89.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 88.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 88.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 88.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 88.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 88.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 87.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 87.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 87.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 87.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 86.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 86.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 86.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 86.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 86.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 86.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 86.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 85.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 85.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 85.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 85.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 85.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 85.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 85.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 84.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 84.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 84.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 84.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 84.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 84.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 83.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 83.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 83.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 83.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 83.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 82.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 82.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 81.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 81.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 81.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 80.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 80.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 80.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 80.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 80.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 79.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 79.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 79.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 79.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 78.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 78.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 77.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 77.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 77.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 77.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 77.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 77.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 77.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 77.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 76.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 76.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 76.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 75.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 75.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 75.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 75.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 75.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 75.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 75.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 75.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 75.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 75.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 75.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 75.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 74.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 73.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 73.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 73.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 73.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 73.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 73.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 73.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 73.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 73.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 73.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 73.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 72.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 72.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 72.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 71.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 71.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 71.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 71.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 71.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 70.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 70.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 69.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 69.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 69.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 69.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 68.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 68.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 68.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 68.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 68.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 67.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 67.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 67.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 66.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 66.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 66.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 65.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 65.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 65.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 64.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 63.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 63.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 63.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 62.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 61.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 61.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 60.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 59.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 57.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 57.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 57.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 54.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 51.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 51.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 50.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

246.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 206.4
FF:10164-103B2 76 years, female 206.4
Nucleus accumbens
Scaled Tags Per Million: 199.1
FF:10037-101F1 23-56 years, mixed 199.1
Putamen
Scaled Tags Per Million: 204.1
FF:10176-103C5 60 years, female 204.1
Globus pallidus
Scaled Tags Per Million: 246.2
FF:10175-103C4 60 years, female 309.1
FF:10161-103A8 76 years, female 183.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.8
Pig sample Sample description nTPM
Caudate
nTPM: 135.6
Samples: 4

Max nTPM: 164.3
Min nTPM: 107.3
Sample A Female 107.3
Sample B Female 142.1
Sample C Male 164.3
Sample D Male 128.7
Putamen
nTPM: 140.8
Samples: 4

Max nTPM: 178.4
Min nTPM: 110.0
Sample A Female 110.0
Sample B Female 130.5
Sample C Male 178.4
Sample D Male 144.4
Septum
nTPM: 121.4
Samples: 4

Max nTPM: 128.6
Min nTPM: 110.1
Sample A Female 127.2
Sample B Female 119.6
Sample C Male 128.6
Sample D Male 110.1
Ventral pallidum
nTPM: 127.2
Samples: 4

Max nTPM: 130.4
Min nTPM: 121.3
Sample A Female 121.3
Sample B Female 130.4
Sample C Male 129.1
Sample D Male 128.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 136.3
Samples: 4

Max nTPM: 156.0
Min nTPM: 115.5
Sample A Male 115.5
Sample B Male 134.0
Sample C Female 139.5
Sample D Female 156.0
Septum
nTPM: 108.8
Samples: 4

Max nTPM: 112.2
Min nTPM: 105.1
Sample A Male 105.1
Sample B Male 109.5
Sample C Female 108.4
Sample D Female 112.2
Ventral forebrain
nTPM: 124.6
Samples: 4

Max nTPM: 131.1
Min nTPM: 115.1
Sample A Male 122.2
Sample B Male 115.1
Sample C Female 131.1
Sample D Female 129.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.1
294052 Antisense, RP_040617_02_F11, Mouse strain C57BL/6J (56 days, male) 9.8
67936005 Antisense, RP_041018_01_F01, Mouse strain C57BL/6J (56 days, male) 6.5
Pallidum
Expression energy: 7.4
294052 Antisense, RP_040617_02_F11, Mouse strain C57BL/6J (56 days, male) 9.2
67936005 Antisense, RP_041018_01_F01, Mouse strain C57BL/6J (56 days, male) 5.6

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