A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
448.1
nTPM
Monaco:
779.6
nTPM
Schmiedel:
497.1
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
448.1
HPA sample
nTPM
Classical monocyte nTPM: 448.1
Samples: 6
Max nTPM: 548.7
Min nTPM: 341.5
P10809_1003
548.7
P10809_1020
506.6
P10809_1039
518.0
P10809_1058
341.5
P10809_1080
380.7
P10809_1107
393.3
Intermediate monocyte nTPM: 438.0
Samples: 6
Max nTPM: 506.6
Min nTPM: 333.9
P10809_1004
333.9
P10809_1023
506.6
P10809_1042
484.0
P10809_1061
474.6
P10809_1081
382.4
P10809_1108
446.4
Non-classical monocyte nTPM: 331.9
Samples: 5
Max nTPM: 524.0
Min nTPM: 236.8
P10809_1005
253.4
P10809_1053
337.2
P10809_1072
524.0
P10809_1082
236.8
P10809_1109
308.2
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
779.6
Monaco sample
nTPM
Classical monocyte nTPM: 779.7
Samples: 4
Max nTPM: 990.2
Min nTPM: 698.2
RHH5313_R3680
990.2
RHH5221_R3593
698.2
RHH5250_R3622
714.7
RHH5279_R3651
715.5
Intermediate monocyte nTPM: 640.2
Samples: 4
Max nTPM: 767.3
Min nTPM: 526.5
RHH5314_R3681
767.3
RHH5222_R3594
526.5
RHH5251_R3623
557.3
RHH5280_R3652
709.8
Non-classical monocyte nTPM: 571.6
Samples: 4
Max nTPM: 595.9
Min nTPM: 538.6
RHH5315_R3682
580.1
RHH5223_R3595
538.6
RHH5252_R3624
571.9
RHH5281_R3653
595.9
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
497.1
Schmiedel sample id
TPM
Classical monocyte TPM: 497.1
Samples: 91
Max TPM: 692.7
Min TPM: 340.9
MONOCYTES_1
692.7
MONOCYTES_2
682.5
MONOCYTES_3
672.4
MONOCYTES_4
635.3
MONOCYTES_5
628.2
MONOCYTES_6
627.4
MONOCYTES_7
618.7
MONOCYTES_8
598.8
MONOCYTES_9
595.0
MONOCYTES_10
594.3
MONOCYTES_11
588.0
MONOCYTES_12
583.2
MONOCYTES_13
574.5
MONOCYTES_14
560.1
MONOCYTES_15
553.7
MONOCYTES_16
553.0
MONOCYTES_17
552.6
MONOCYTES_18
552.1
MONOCYTES_19
551.1
MONOCYTES_20
550.3
MONOCYTES_21
536.6
MONOCYTES_22
534.2
MONOCYTES_23
533.7
MONOCYTES_24
531.2
MONOCYTES_25
530.7
MONOCYTES_26
528.1
MONOCYTES_27
528.1
MONOCYTES_28
524.0
MONOCYTES_29
521.8
MONOCYTES_30
521.3
MONOCYTES_31
515.4
MONOCYTES_32
515.2
MONOCYTES_33
514.6
MONOCYTES_34
514.2
MONOCYTES_35
513.8
MONOCYTES_36
513.8
MONOCYTES_37
511.6
MONOCYTES_38
510.4
MONOCYTES_39
510.4
MONOCYTES_40
506.7
MONOCYTES_41
506.5
MONOCYTES_42
505.8
MONOCYTES_43
503.9
MONOCYTES_44
503.2
MONOCYTES_45
500.3
MONOCYTES_46
499.9
MONOCYTES_47
498.7
MONOCYTES_48
496.8
MONOCYTES_49
496.8
MONOCYTES_50
495.9
MONOCYTES_51
494.9
MONOCYTES_52
491.5
MONOCYTES_53
484.2
MONOCYTES_54
479.7
MONOCYTES_55
474.7
MONOCYTES_56
473.7
MONOCYTES_57
472.9
MONOCYTES_58
471.6
MONOCYTES_59
468.8
MONOCYTES_60
468.5
MONOCYTES_61
464.6
MONOCYTES_62
463.3
MONOCYTES_63
459.9
MONOCYTES_64
459.4
MONOCYTES_65
447.9
MONOCYTES_66
444.0
MONOCYTES_67
443.1
MONOCYTES_68
442.1
MONOCYTES_69
441.9
MONOCYTES_70
441.5
MONOCYTES_71
441.5
MONOCYTES_72
438.4
MONOCYTES_73
438.1
MONOCYTES_74
435.8
MONOCYTES_75
427.3
MONOCYTES_76
425.4
MONOCYTES_77
423.6
MONOCYTES_78
423.0
MONOCYTES_79
417.4
MONOCYTES_80
414.9
MONOCYTES_81
414.9
MONOCYTES_82
410.9
MONOCYTES_83
401.3
MONOCYTES_84
398.3
MONOCYTES_85
397.0
MONOCYTES_86
396.0
MONOCYTES_87
383.5
MONOCYTES_88
382.4
MONOCYTES_89
376.4
MONOCYTES_90
375.5
MONOCYTES_91
340.9
Show allShow less
Non-classical monocyte TPM: 349.5
Samples: 90
Max TPM: 492.0
Min TPM: 219.9
M2_1
492.0
M2_2
479.9
M2_3
472.3
M2_4
464.3
M2_5
445.6
M2_6
435.6
M2_7
430.7
M2_8
430.4
M2_9
426.3
M2_10
423.9
M2_11
421.4
M2_12
420.9
M2_13
418.7
M2_14
416.9
M2_15
415.3
M2_16
414.1
M2_17
413.0
M2_18
409.2
M2_19
407.4
M2_20
404.5
M2_21
395.9
M2_22
394.1
M2_23
390.6
M2_24
386.5
M2_25
382.9
M2_26
379.4
M2_27
377.0
M2_28
371.0
M2_29
369.9
M2_30
366.8
M2_31
365.5
M2_32
363.8
M2_33
362.5
M2_34
361.9
M2_35
361.2
M2_36
360.2
M2_37
359.6
M2_38
356.1
M2_39
354.3
M2_40
354.1
M2_41
351.8
M2_42
350.9
M2_43
348.5
M2_44
347.3
M2_45
346.4
M2_46
345.8
M2_47
345.5
M2_48
343.2
M2_49
342.9
M2_50
337.9
M2_51
335.4
M2_52
335.2
M2_53
332.7
M2_54
332.1
M2_55
329.1
M2_56
328.1
M2_57
327.3
M2_58
326.8
M2_59
326.2
M2_60
321.1
M2_61
319.8
M2_62
318.4
M2_63
317.0
M2_64
315.8
M2_65
312.9
M2_66
311.5
M2_67
307.7
M2_68
307.5
M2_69
307.4
M2_70
306.7
M2_71
303.7
M2_72
301.8
M2_73
301.8
M2_74
296.2
M2_75
293.8
M2_76
291.9
M2_77
287.8
M2_78
287.0
M2_79
286.6
M2_80
280.6
M2_81
276.2
M2_82
275.1
M2_83
270.2
M2_84
270.1
M2_85
268.7
M2_86
268.4
M2_87
256.8
M2_88
244.1
M2_89
241.6
M2_90
219.9
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.