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BETA
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  • GAB2
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:4.9 nTPM
Monaco:74.1 nTPM
Schmiedel:126.1 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

4.9
HPA sample nTPM
Classical monocyte
nTPM: 3.1
Samples: 6

Max nTPM: 4.4
Min nTPM: 2.3
P10809_1003 4.4
P10809_1020 2.3
P10809_1039 3.2
P10809_1058 3.4
P10809_1080 2.3
P10809_1107 3.1
Intermediate monocyte
nTPM: 1.8
Samples: 6

Max nTPM: 2.8
Min nTPM: 0.6
P10809_1004 1.9
P10809_1023 0.7
P10809_1042 0.6
P10809_1061 2.8
P10809_1081 2.6
P10809_1108 1.9
Non-classical monocyte
nTPM: 4.9
Samples: 5

Max nTPM: 13.3
Min nTPM: 1.9
P10809_1005 3.0
P10809_1053 1.9
P10809_1072 13.3
P10809_1082 3.1
P10809_1109 3.2

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

74.1
Monaco sample nTPM
Classical monocyte
nTPM: 74.1
Samples: 4

Max nTPM: 93.5
Min nTPM: 54.3
RHH5313_R3680 68.1
RHH5221_R3593 93.5
RHH5250_R3622 54.3
RHH5279_R3651 80.6
Intermediate monocyte
nTPM: 61.0
Samples: 4

Max nTPM: 75.8
Min nTPM: 47.1
RHH5314_R3681 58.9
RHH5222_R3594 62.2
RHH5251_R3623 75.8
RHH5280_R3652 47.1
Non-classical monocyte
nTPM: 73.5
Samples: 4

Max nTPM: 110.4
Min nTPM: 50.0
RHH5315_R3682 50.0
RHH5223_R3595 110.4
RHH5252_R3624 76.5
RHH5281_R3653 57.0

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

126.1
Schmiedel sample id TPM
Classical monocyte
TPM: 126.1
Samples: 91

Max TPM: 179.3
Min TPM: 96.2
MONOCYTES_1 179.3
MONOCYTES_2 163.5
MONOCYTES_3 156.9
MONOCYTES_4 155.6
MONOCYTES_5 150.5
MONOCYTES_6 149.8
MONOCYTES_7 148.2
MONOCYTES_8 147.6
MONOCYTES_9 145.8
MONOCYTES_10 145.3
MONOCYTES_11 143.4
MONOCYTES_12 142.4
MONOCYTES_13 141.4
MONOCYTES_14 140.8
MONOCYTES_15 140.1
MONOCYTES_16 140.0
MONOCYTES_17 139.1
MONOCYTES_18 138.8
MONOCYTES_19 138.3
MONOCYTES_20 136.3
MONOCYTES_21 135.8
MONOCYTES_22 135.7
MONOCYTES_23 134.5
MONOCYTES_24 134.2
MONOCYTES_25 134.1
MONOCYTES_26 134.1
MONOCYTES_27 133.7
MONOCYTES_28 131.5
MONOCYTES_29 131.1
MONOCYTES_30 130.6
MONOCYTES_31 128.9
MONOCYTES_32 128.4
MONOCYTES_33 128.2
MONOCYTES_34 127.9
MONOCYTES_35 127.7
MONOCYTES_36 127.7
MONOCYTES_37 127.3
MONOCYTES_38 127.3
MONOCYTES_39 127.0
MONOCYTES_40 126.7
MONOCYTES_41 126.4
MONOCYTES_42 126.3
MONOCYTES_43 125.8
MONOCYTES_44 125.5
MONOCYTES_45 125.5
MONOCYTES_46 125.4
MONOCYTES_47 125.2
MONOCYTES_48 124.5
MONOCYTES_49 124.3
MONOCYTES_50 124.3
MONOCYTES_51 123.4
MONOCYTES_52 123.4
MONOCYTES_53 123.2
MONOCYTES_54 123.0
MONOCYTES_55 123.0
MONOCYTES_56 122.4
MONOCYTES_57 122.4
MONOCYTES_58 121.9
MONOCYTES_59 121.8
MONOCYTES_60 121.5
MONOCYTES_61 121.5
MONOCYTES_62 120.1
MONOCYTES_63 119.9
MONOCYTES_64 118.9
MONOCYTES_65 118.1
MONOCYTES_66 117.8
MONOCYTES_67 117.5
MONOCYTES_68 116.3
MONOCYTES_69 114.6
MONOCYTES_70 114.6
MONOCYTES_71 114.5
MONOCYTES_72 114.3
MONOCYTES_73 113.9
MONOCYTES_74 112.6
MONOCYTES_75 112.2
MONOCYTES_76 111.9
MONOCYTES_77 111.5
MONOCYTES_78 111.3
MONOCYTES_79 110.7
MONOCYTES_80 109.9
MONOCYTES_81 109.1
MONOCYTES_82 108.9
MONOCYTES_83 106.5
MONOCYTES_84 106.1
MONOCYTES_85 105.7
MONOCYTES_86 104.5
MONOCYTES_87 102.8
MONOCYTES_88 102.2
MONOCYTES_89 101.1
MONOCYTES_90 97.3
MONOCYTES_91 96.2
Show allShow less
Non-classical monocyte
TPM: 124.6
Samples: 90

Max TPM: 181.3
Min TPM: 85.5
M2_1 181.3
M2_2 158.0
M2_3 158.0
M2_4 154.7
M2_5 153.6
M2_6 153.1
M2_7 152.1
M2_8 151.6
M2_9 149.0
M2_10 147.2
M2_11 146.7
M2_12 146.3
M2_13 145.2
M2_14 144.1
M2_15 143.8
M2_16 143.6
M2_17 141.3
M2_18 140.2
M2_19 140.0
M2_20 139.2
M2_21 136.7
M2_22 134.7
M2_23 134.2
M2_24 133.8
M2_25 133.6
M2_26 132.9
M2_27 132.2
M2_28 131.3
M2_29 130.8
M2_30 130.4
M2_31 129.5
M2_32 129.2
M2_33 128.9
M2_34 128.1
M2_35 127.8
M2_36 126.5
M2_37 125.7
M2_38 124.7
M2_39 124.5
M2_40 124.2
M2_41 123.8
M2_42 123.5
M2_43 123.3
M2_44 123.0
M2_45 122.9
M2_46 122.1
M2_47 122.1
M2_48 122.1
M2_49 121.8
M2_50 120.8
M2_51 120.2
M2_52 119.9
M2_53 119.3
M2_54 119.0
M2_55 118.6
M2_56 117.5
M2_57 117.1
M2_58 116.6
M2_59 116.5
M2_60 116.3
M2_61 116.2
M2_62 116.2
M2_63 115.9
M2_64 115.2
M2_65 115.1
M2_66 114.7
M2_67 113.1
M2_68 112.9
M2_69 112.8
M2_70 111.9
M2_71 111.2
M2_72 110.9
M2_73 110.5
M2_74 109.8
M2_75 108.6
M2_76 108.5
M2_77 106.9
M2_78 106.6
M2_79 105.2
M2_80 104.1
M2_81 104.0
M2_82 103.9
M2_83 102.8
M2_84 101.6
M2_85 100.8
M2_86 99.7
M2_87 98.2
M2_88 98.0
M2_89 95.6
M2_90 85.5
Show allShow less

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