HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:1879.7 nTPM
HPA Brain:1316.5 nTPM
GTEx:1879.7 nTPM
FANTOM5:762.1 Scaled Tags Per Million
Mouse:0.0 nTPM
Allen mouse:15.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 1316.5
Sample id Sample description nTPM
Hippocampus
nTPM: 677.7
2529 Female, age 94, left hemisphere 836.2
1898 Male, age 80, left hemisphere 732.2
2621 Female, age 67, right hemisphere 699.8
1855 Male, age 76, left hemisphere 696.8
1911 Female, age 85, right hemisphere 591.6
2148 Female, age 91, left hemisphere 509.4
Dentate gyrus
nTPM: 693.0
2246 Female, age 85, both hemispheres 914.1
2531 Female, age 67, both hemispheres 819.3
2530 Female, age 94, left hemisphere 775.9
2010 Male, age 76, both hemispheres 623.3
1927 Female, age 91, both hemispheres 569.5
2528 Male, age 74, both hemispheres 455.7
Entorhinal gyrus
nTPM: 929.4
1938 Female, age 85, left hemisphere 1256.6
2764 Male, age 80, right hemisphere 1176.4
1787 Male, age 76, left hemisphere 984.6
2613 Female, age 94, left hemisphere 847.0
2686 Male, age 75, right hemisphere 750.5
2117 Female, age 91, right hemisphere 561.4
Hippocampus, CA1
nTPM: 736.8
2045 Male, age 76, both hemispheres 940.1
2749 Male, age 80, left hemisphere 759.7
2082 Female, age 91, right hemisphere 719.2
2527 Male, age 74, both hemispheres 665.7
1873 Female, age 85, both hemispheres 599.3
Hippocampus, CA2
nTPM: 688.0
1940 Female, age 85, left hemisphere 875.0
2437 Female, age 94, left hemisphere 835.1
1892 Male, age 76, both hemispheres 817.4
2113 Female, age 91, right hemisphere 621.6
2249 Male, age 74, both hemispheres 512.4
1963 Male, age 80, left hemisphere 466.4
Hippocampus, CA3
nTPM: 761.5
1867 Male, age 76, both hemispheres 916.9
2137 Male, age 80, left hemisphere 813.7
2861 Female, age 67, both hemispheres 784.9
2620 Female, age 94, left hemisphere 768.2
1891 Female, age 85, both hemispheres 697.8
2436 Male, age 74, both hemispheres 587.6
Parahippocampal cortex
nTPM: 1004.8
2532 Female, age 72, left hemisphere 1429.6
1933 Female, age 85, both hemispheres 1414.3
1850 Male, age 80, both hemispheres 1278.8
2245 Female, age 91, both hemispheres 1028.4
2018 Male, age 76, both hemispheres 1015.3
2250 Female, age 67, right hemisphere 941.0
1990 Female, age 91, right hemisphere 843.4
2693 Female, age 94, both hemispheres 749.1
2622 Female, age 67, right hemisphere 745.4
2692 Male, age 74, both hemispheres 602.5
Perirhinal gyrus
nTPM: 1316.5
1847 Female, age 91, left hemisphere 1495.9
1841 Female, age 85, right hemisphere 1447.1
1794 Male, age 80, right hemisphere 1445.5
2521 Female, age 94, right hemisphere 1180.4
2848 Male, age 76, right hemisphere 1013.7
Subiculum
nTPM: 756.7
1977 Female, age 85, both hemispheres 1134.1
2438 Female, age 94, left hemisphere 836.6
2619 Male, age 74, both hemispheres 697.9
2042 Male, age 76, both hemispheres 688.0
1901 Male, age 80, both hemispheres 687.6
2729 Female, age 91, right hemisphere 496.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1879.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1879.7
Samples: 255

Max nTPM: 7637.5
Min nTPM: 598.5
Std nTPM: 881.0
Median nTPM: 1711.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 7637.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 5313.0
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 5029.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 4307.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 4075.4
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 3993.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 3982.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 3952.1
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 3916.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 3906.3
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 3838.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 762.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 762.1
FF:10169-103B7 60 years, female 895.2
FF:10153-102I9 76 years, female 629.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.6
73521810 Antisense, RP_051101_03_A09, Mouse strain C57BL/6J (56 days, male) 15.7
69816996 Antisense, RP_050510_02_D07, Mouse strain C57BL/6J (56 days, male) 15.4

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo