HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:297.7 nTPM
HPA Brain:189.0 nTPM
GTEx:297.7 nTPM
FANTOM5:157.8 Scaled Tags Per Million
Pig:168.1 nTPM
Mouse:167.3 nTPM
Allen mouse:5.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036726
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 189.0
Sample id Sample description nTPM
Hippocampus
nTPM: 183.1
1898 Male, age 80, left hemisphere 243.4
2529 Female, age 94, left hemisphere 180.4
1855 Male, age 76, left hemisphere 178.3
1911 Female, age 85, right hemisphere 176.3
2148 Female, age 91, left hemisphere 164.2
2621 Female, age 67, right hemisphere 155.9
Dentate gyrus
nTPM: 170.4
2010 Male, age 76, both hemispheres 199.9
1927 Female, age 91, both hemispheres 192.9
2528 Male, age 74, both hemispheres 185.8
2530 Female, age 94, left hemisphere 173.4
2246 Female, age 85, both hemispheres 148.7
2531 Female, age 67, both hemispheres 121.9
Entorhinal gyrus
nTPM: 158.7
2117 Female, age 91, right hemisphere 191.1
1938 Female, age 85, left hemisphere 181.2
2764 Male, age 80, right hemisphere 168.5
1787 Male, age 76, left hemisphere 160.9
2686 Male, age 75, right hemisphere 141.1
2613 Female, age 94, left hemisphere 109.4
Hippocampus, CA1
nTPM: 189.0
2749 Male, age 80, left hemisphere 211.4
1873 Female, age 85, both hemispheres 201.2
2045 Male, age 76, both hemispheres 194.1
2527 Male, age 74, both hemispheres 176.2
2082 Female, age 91, right hemisphere 162.0
Hippocampus, CA2
nTPM: 185.9
2249 Male, age 74, both hemispheres 222.6
1963 Male, age 80, left hemisphere 202.1
1892 Male, age 76, both hemispheres 201.1
1940 Female, age 85, left hemisphere 178.6
2113 Female, age 91, right hemisphere 168.3
2437 Female, age 94, left hemisphere 143.0
Hippocampus, CA3
nTPM: 163.7
1867 Male, age 76, both hemispheres 187.6
1891 Female, age 85, both hemispheres 184.5
2436 Male, age 74, both hemispheres 178.9
2137 Male, age 80, left hemisphere 165.8
2620 Female, age 94, left hemisphere 141.8
2861 Female, age 67, both hemispheres 123.4
Parahippocampal cortex
nTPM: 159.9
2018 Male, age 76, both hemispheres 190.4
1850 Male, age 80, both hemispheres 188.5
1933 Female, age 85, both hemispheres 180.0
1990 Female, age 91, right hemisphere 176.2
2250 Female, age 67, right hemisphere 170.6
2245 Female, age 91, both hemispheres 154.9
2693 Female, age 94, both hemispheres 142.9
2532 Female, age 72, left hemisphere 139.2
2692 Male, age 74, both hemispheres 136.5
2622 Female, age 67, right hemisphere 120.1
Perirhinal gyrus
nTPM: 182.5
1847 Female, age 91, left hemisphere 208.9
1841 Female, age 85, right hemisphere 198.8
1794 Male, age 80, right hemisphere 190.8
2521 Female, age 94, right hemisphere 157.7
2848 Male, age 76, right hemisphere 156.2
Subiculum
nTPM: 164.2
1901 Male, age 80, both hemispheres 184.3
1977 Female, age 85, both hemispheres 182.2
2729 Female, age 91, right hemisphere 177.9
2042 Male, age 76, both hemispheres 174.8
2619 Male, age 74, both hemispheres 149.2
2438 Female, age 94, left hemisphere 117.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 297.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 297.7
Samples: 255

Max nTPM: 680.5
Min nTPM: 150.9
Std nTPM: 59.3
Median nTPM: 289.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 680.5
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 477.3
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 453.3
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 441.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 440.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 428.8
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 426.3
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 421.6
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 419.1
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 412.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 409.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 157.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 157.8
FF:10169-103B7 60 years, female 177.5
FF:10153-102I9 76 years, female 138.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 168.1
Pig sample Sample description nTPM
Subiculum
nTPM: 149.4
Samples: 4

Max nTPM: 187.9
Min nTPM: 123.9
Sample A Female 187.9
Sample B Female 149.4
Sample C Male 123.9
Sample D Male 136.2
Dorsal hippocampus
nTPM: 168.1
Samples: 4

Max nTPM: 217.8
Min nTPM: 123.5
Sample A Female 217.8
Sample B Female 162.7
Sample C Male 168.3
Sample D Male 123.5
Entorhinal cortex
nTPM: 147.5
Samples: 4

Max nTPM: 189.7
Min nTPM: 121.4
Sample A Female 134.2
Sample B Female 189.7
Sample C Male 144.8
Sample D Male 121.4
Ventral hippocampus
nTPM: 146.2
Samples: 4

Max nTPM: 156.2
Min nTPM: 130.8
Sample A Female 156.2
Sample B Female 130.8
Sample C Male 148.3
Sample D Male 149.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 167.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 149.4
Samples: 4

Max nTPM: 159.7
Min nTPM: 137.5
Sample A Male 146.6
Sample B Male 153.8
Sample C Female 159.7
Sample D Female 137.5
Hippocampal formation
nTPM: 167.3
Samples: 4

Max nTPM: 182.9
Min nTPM: 154.1
Sample A Male 182.9
Sample B Male 154.1
Sample C Female 158.5
Sample D Female 173.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
68637778 Antisense, RP_050126_01_F01, Mouse strain C57BL/6J (56 days, male) 5.1

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