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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
234.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 193.8
2411
Female, age 72, unknown
240.8
1870
Female, age 42, unknown
220.3
2019
Male, age 18, unknown
219.0
1827
Male, age 72, unknown
217.6
2828
Female, age 72, unknown
203.1
1833
Male, age 53, unknown
183.8
1830
Male, age 51, unknown
173.9
2666
Male, age 74, left hemisphere
166.0
2219
Male, age 76, both hemispheres
160.2
2586
Male, age 75, left hemisphere
153.1
Dorsal raphe nucleus nTPM: 234.8
2298
Female, age 72, unknown
297.3
2016
Female, age 72, unknown
229.6
2047
Male, age 72, unknown
219.4
1828
Male, age 53, unknown
214.2
2750
Male, age 76, both hemispheres
213.7
Inferior colliculus nTPM: 207.5
2097
Female, age 72, unknown
262.9
1890
Male, age 53, unknown
203.0
1848
Female, age 42, unknown
196.8
2849
Male, age 72, unknown
167.4
Median raphe nucleus nTPM: 202.2
2220
Male, age 76, midline
202.2
Periaquaductal grey, anterior nTPM: 214.6
2502
Female, age 75, unknown
226.4
1947
Male, age 18, unknown
219.3
1795
Male, age 51, unknown
198.1
Periaquaductal grey, dorsal nTPM: 202.1
1840
Male, age 53, unknown
231.9
2464
Female, age 72, unknown
203.1
1831
Male, age 72, unknown
187.9
2850
Male, age 76, both hemispheres
185.5
Periaquaductal grey, lateral nTPM: 192.2
2053
Male, age 18, unknown
215.5
2272
Male, age 74, both hemispheres
183.4
2140
Male, age 76, both hemispheres
177.8
Pretectal area nTPM: 232.5
1816
Male, age 51, unknown
257.8
1944
Female, age 72, unknown
252.0
2667
Female, age 75, unknown
249.8
1817
Female, age 42, unknown
247.0
2273
Male, age 74, both hemispheres
245.6
2007
Male, age 72, unknown
241.8
1815
Male, age 53, unknown
239.7
2224
Female, age 72, unknown
225.2
2316
Male, age 76, right hemisphere
213.0
2407
Male, age 75, both hemispheres
193.4
2825
Male, age 18, unknown
192.0
Red nucleus nTPM: 206.1
1821
Female, age 72, unknown
278.0
1954
Female, age 42, unknown
223.3
1904
Male, age 53, unknown
219.0
2823
Male, age 76, right hemisphere
216.5
2503
Female, age 72, unknown
214.2
1865
Male, age 51, unknown
211.7
2769
Male, age 72, unknown
205.7
2785
Male, age 18, unknown
199.9
2227
Male, age 72, unknown
199.3
2725
Female, age 75, unknown
186.7
2588
Male, age 74, left hemisphere
167.3
2584
Male, age 75, left hemisphere
151.8
Substantia nigra nTPM: 215.5
2241
Male, age 72, unknown
276.6
1916
Female, age 42, unknown
246.3
1889
Female, age 72, unknown
239.2
1851
Male, age 51, unknown
237.3
2409
Female, age 72, unknown
228.4
1941
Male, age 53, unknown
202.3
2590
Female, age 75, unknown
190.8
2699
Male, age 18, unknown
186.4
2665
Male, age 74, both hemispheres
177.7
2583
Male, age 75, right hemisphere
169.9
Superior colliculus nTPM: 210.5
2587
Male, age 74, left hemisphere
228.3
1895
Male, age 76, right hemisphere
227.5
2668
Female, age 75, unknown
224.4
2261
Male, age 18, unknown
224.0
2087
Female, age 72, unknown
213.7
1796
Male, age 53, unknown
208.5
1913
Female, age 42, unknown
206.3
1995
Male, age 72, unknown
192.2
1839
Male, age 51, unknown
190.6
2664
Male, age 75, both hemispheres
188.9
Ventral tegmental area nTPM: 208.8
2410
Female, age 72, unknown
236.7
1915
Female, age 42, unknown
224.8
1942
Male, age 51, unknown
212.1
2021
Male, age 53, unknown
196.8
2218
Male, age 76, both hemispheres
193.7
2223
Female, age 72, unknown
188.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
392.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 392.9
Samples: 183
Max nTPM: 646.4
Min nTPM: 145.8
Std nTPM: 72.8
Median nTPM: 383.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
646.4
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
637.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
591.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
589.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
566.2
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
545.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
534.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
522.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
510.7
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
510.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
505.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
498.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
493.1
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
492.0
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
491.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
490.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
487.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
484.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
483.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
482.2
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
479.7
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
476.1
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
472.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
470.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
464.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
463.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
461.3
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
461.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
457.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
454.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
451.3
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
450.2
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
449.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
447.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
446.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
444.5
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
444.2
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
443.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
443.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
442.5
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
441.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
441.1
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
440.0
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
439.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
439.3
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
438.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
437.1
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
436.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
435.7
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
432.0
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
432.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
431.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
430.4
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
427.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
427.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
426.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
425.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
424.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
423.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
422.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
420.1
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
419.4
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
418.5
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
417.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
417.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
415.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
414.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
414.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
413.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
413.1
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
412.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
410.7
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
410.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
409.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
409.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
405.3
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
404.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
403.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
399.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
397.4
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
395.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
394.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
392.2
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
391.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
386.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
386.1
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
385.1
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
385.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
384.0
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
383.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
383.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
383.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
383.1
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
383.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
382.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
381.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
381.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
380.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
380.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
380.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
378.9
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
376.6
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
375.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
373.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
372.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
371.0
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
370.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
370.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
370.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
368.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
368.3
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
366.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
365.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
364.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
363.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
363.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
362.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
361.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
361.0
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
357.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
357.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
356.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
356.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
355.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
355.4
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
354.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
352.0
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
351.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
350.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
350.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
349.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
348.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
347.3
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
347.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
345.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
344.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
344.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
344.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
342.6
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
342.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
340.1
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
339.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
339.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
338.3
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
337.3
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
336.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
336.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
335.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
334.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
333.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
333.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
333.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
331.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
331.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
330.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
330.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
330.3
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
329.9
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
329.3
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
326.4
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
324.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
321.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
320.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
319.8
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
319.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
318.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
316.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
315.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
314.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
313.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
310.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
309.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
300.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
297.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
293.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
288.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
287.0
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
277.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
263.7
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
249.0
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
226.4
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
165.6
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
145.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
272.9
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 235.7
Samples: 4
Max nTPM: 322.1
Min nTPM: 185.4
Sample A
Female
322.1
Sample B
Female
185.4
Sample C
Male
214.7
Sample D
Male
220.6
Midbrain nTPM: 273.0
Samples: 4
Max nTPM: 370.3
Min nTPM: 207.4
Sample A
Female
370.3
Sample B
Female
242.8
Sample C
Male
271.4
Sample D
Male
207.4
Periaqueductal gray nTPM: 184.6
Samples: 3
Max nTPM: 191.4
Min nTPM: 178.3
Sample B
Female
191.4
Sample C
Male
184.2
Sample D
Male
178.3
Superior colliculi nTPM: 257.7
Samples: 4
Max nTPM: 311.6
Min nTPM: 187.6
Sample A
Female
291.1
Sample B
Female
187.6
Sample C
Male
311.6
Sample D
Male
240.4
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
193.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 193.6
Samples: 4
Max nTPM: 202.3
Min nTPM: 189.2
Sample A
Male
202.3
Sample B
Male
190.5
Sample C
Female
192.4
Sample D
Female
189.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.