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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • JADE2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:42.1 nTPM
GTEx:9.2 nTPM
FANTOM5:32.4 Scaled Tags Per Million
Pig:27.4 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.1
Sample id Sample description nTPM
Putamen
nTPM: 42.1
2466 Female, age 79, unknown 49.7
2647 Male, age 75, left hemisphere 45.3
1829 Male, age 74, unknown 44.8
2489 Female, age 72, unknown 41.5
1937 Female, age 91, right hemisphere 39.0
2482 Female, age 94, left hemisphere 38.0
1838 Male, age 80, right hemisphere 36.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 9.2
Samples: 254

Max nTPM: 16.1
Min nTPM: 3.9
Std nTPM: 2.2
Median nTPM: 9.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 16.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 14.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 14.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 14.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 14.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 14.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 13.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 13.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 13.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 13.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 13.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 13.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 13.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 13.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 13.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 12.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 12.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 12.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 12.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 12.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 12.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 12.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 12.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 12.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 12.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 12.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 12.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 12.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 12.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 12.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 12.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 12.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 11.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 11.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 11.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 11.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 11.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 11.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 11.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 11.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 11.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 11.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 11.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 11.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 11.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 11.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 11.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 11.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 11.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 11.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 11.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 11.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 11.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 11.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 11.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 11.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 11.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 11.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 11.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 11.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 10.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 10.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 10.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 10.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 10.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 10.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 10.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 10.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 10.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 10.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 10.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 10.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 10.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 10.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 10.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 10.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 10.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 10.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 10.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 10.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 10.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 10.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 10.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 10.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 10.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 10.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 10.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 10.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 10.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 10.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 10.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 10.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 10.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 10.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 9.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 9.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 9.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 9.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 9.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 9.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 9.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 9.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 9.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 9.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 9.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 9.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 9.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 9.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 9.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 9.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 9.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 9.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 9.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 9.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 9.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 9.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 9.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 9.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 9.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 9.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 9.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 9.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 9.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 9.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 9.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 9.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 9.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 9.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 9.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 9.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 9.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 8.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 8.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 8.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 8.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 8.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 8.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 8.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 8.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 8.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 8.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 8.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 8.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 8.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 8.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 8.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 8.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 8.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 8.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 8.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 8.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 8.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 8.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 8.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 8.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 8.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 8.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 8.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 8.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 8.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 8.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 8.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 8.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 8.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 8.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 8.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 8.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 8.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 8.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 7.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 7.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 7.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 7.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 7.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 7.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 7.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 7.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 7.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 7.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 7.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 7.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 7.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 7.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 7.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 7.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 7.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 7.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 7.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 7.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 7.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 7.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 7.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 7.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 7.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 7.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 7.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 7.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 7.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 7.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 7.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 7.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 7.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 7.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 7.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 7.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 7.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 7.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 7.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 7.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 7.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 7.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 6.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 6.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 6.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 6.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 6.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 6.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 6.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 6.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 6.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 6.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 6.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 6.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 6.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 6.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 6.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 6.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 6.2
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 6.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 6.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 6.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 6.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 6.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 5.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 5.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 5.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 5.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 5.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 5.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 5.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 5.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 5.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 5.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 4.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 4.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 4.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 3.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

32.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 32.4
FF:10176-103C5 60 years, female 32.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.4
Pig sample Sample description nTPM
Putamen
nTPM: 27.4
Samples: 3

Max nTPM: 31.8
Min nTPM: 23.7
Sample B Female 23.7
Sample C Male 26.8
Sample D Male 31.8

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