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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • GPM6B
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:709.5 nTPM
HPA Brain:1213.0 nTPM
GTEx:709.5 nTPM
FANTOM5:1432.2 Scaled Tags Per Million
Macaque:708.8 nTPM
Mouse:179.3 nTPM
Rat:644.2 nTPM
Pig:1005.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity ND
Sample Intensity
Spinal cord_01
ND
Spinal cord_02
ND
Spinal cord_03
ND
Spinal cord_04
ND
Spinal cord_05
ND
Spinal cord_06
ND
Spinal cord_07
ND
Spinal cord_08
ND

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1213.0
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 979.7
2193 Male, age 75, both hemispheres 1084.3
2818 Female, age 79, both hemispheres 1069.7
2819 Male, age 47, both hemispheres 909.2
2734 Male, age 80, both hemispheres 855.6
Cervical spinal cord, central gray
nTPM: 765.1
1981 Female, age 72, midline 975.0
2048 Male, age 55, midline 900.9
2816 Male, age 47, midline 747.8
2194 Female, age 79, both hemispheres 615.4
2565 Male, age 75, midline 586.7
Cervical spinal cord, dorsal horn
nTPM: 803.5
2296 Male, age 66, both hemispheres 1409.1
2173 Female, age 72, unknown 1042.9
2069 Male, age 47, both hemispheres 872.7
1877 Male, age 55, unknown 660.5
2721 Male, age 90, both hemispheres 427.0
2297 Male, age 75, both hemispheres 408.9
Cervical spinal cord, ventral horn
nTPM: 738.1
2098 Female, age 72, unknown 1081.9
2068 Male, age 55, unknown 748.2
2480 Male, age 75, both hemispheres 714.7
2809 Male, age 90, both hemispheres 687.3
2295 Male, age 66, both hemispheres 636.6
2820 Female, age 79, both hemispheres 560.1
Dorsal funiculus (white matter)
nTPM: 1213.0
2810 Male, age 90, both hemispheres 1378.5
2064 Female, age 79, both hemispheres 1258.5
2128 Male, age 75, both hemispheres 1225.6
2812 Male, age 66, both hemispheres 1119.6
2817 Male, age 47, both hemispheres 1082.8
Lateral funiculus (white matter)
nTPM: 1088.9
2099 Male, age 90, both hemispheres 1613.5
2094 Female, age 79, both hemispheres 1205.7
2192 Male, age 75, both hemispheres 886.4
2294 Male, age 66, both hemispheres 650.3

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

709.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 709.5
Samples: 204

Max nTPM: 1242.2
Min nTPM: 223.3
Std nTPM: 212.2
Median nTPM: 706.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1242.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1197.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1189.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1158.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1155.3
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 1129.6
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 1125.7
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1082.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1070.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1048.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1046.8
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1037.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1031.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1031.2
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1028.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1021.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 1019.4
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 1007.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1006.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 998.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 978.9
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 978.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 977.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 976.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 968.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 959.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 952.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 945.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 937.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 932.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 927.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 926.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 926.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 925.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 918.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 917.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 915.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 904.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 904.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 903.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 900.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 894.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 889.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 886.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 883.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 873.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 861.7
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 861.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 859.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 858.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 854.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 848.6
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 845.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 844.0
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 840.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 833.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 829.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 825.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 823.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 822.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 821.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 819.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 816.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 814.3
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 811.5
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 809.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 809.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 808.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 805.8
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 800.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 799.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 796.5
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 793.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 786.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 785.6
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 778.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 777.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 773.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 770.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 769.0
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 760.7
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 760.5
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 758.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 757.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 756.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 755.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 755.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 752.8
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 750.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 744.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 742.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 736.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 736.1
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 735.5
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 730.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 728.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 727.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 726.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 717.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 713.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 712.7
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 706.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 706.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 702.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 700.0
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 699.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 694.4
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 691.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 691.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 690.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 689.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 687.0
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 684.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 681.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 679.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 678.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 673.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 672.4
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 672.4
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 671.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 669.7
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 669.6
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 667.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 663.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 657.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 651.7
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 639.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 634.7
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 634.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 633.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 630.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 626.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 625.5
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 622.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 619.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 617.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 611.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 611.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 609.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 609.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 609.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 593.4
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 592.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 589.2
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 588.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 587.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 587.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 586.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 584.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 577.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 574.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 571.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 570.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 570.2
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 566.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 558.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 555.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 552.5
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 549.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 548.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 547.3
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 543.0
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 539.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 539.7
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 539.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 535.7
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 534.4
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 534.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 521.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 517.5
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 503.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 498.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 488.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 479.2
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 469.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 467.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 464.8
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 463.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 456.6
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 455.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 453.9
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 446.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 444.9
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 430.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 427.2
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 417.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 371.9
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 367.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 366.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 359.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 358.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 355.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 355.2
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 343.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 343.7
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 331.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 297.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 294.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 291.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 270.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 270.1
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 245.3
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 239.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 223.3
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1432.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1432.2
FF:10181-103D1 60 years, female 1518.4
FF:10159-103A6 76 years, female 1346.0

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

708.8
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 696.2
Samples: 2

Max nTPM: 742.5
Min nTPM: 649.9
Sample A 742.5
Sample B 649.9
Ventral spinal cord
nTPM: 708.8
Samples: 1

Max nTPM: 708.8
Min nTPM: 708.8
Sample A 708.8

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1005.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 816.3
Samples: 4

Max nTPM: 960.1
Min nTPM: 703.6
Sample A Female 753.5
Sample B Female 960.1
Sample C Male 703.6
Sample D Male 847.8
Ventral spinal cord
nTPM: 1005.3
Samples: 4

Max nTPM: 1229.6
Min nTPM: 788.6
Sample A Female 1035.4
Sample B Female 967.6
Sample C Male 788.6
Sample D Male 1229.6

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

179.3
Mouse sample Sample description nTPM
Spinal cord
nTPM: 179.3
Samples: 4

Max nTPM: 200.8
Min nTPM: 164.4
Sample A 200.8
Sample B 168.5
Sample C 164.4
Sample D 183.5

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

644.2
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 644.2
Samples: 4

Max nTPM: 721.7
Min nTPM: 534.6
Sample A 721.7
Sample A 651.6
Sample A 668.8
Sample A 534.6

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