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NEDD4L
HPA
RESOURCES
  • TISSUE
  • BRAIN
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Brain region
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Brain region
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Tau score
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Interacting gene (ensg_id)
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ipTM
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • NEDD4L
INTERACTION INTERACTION METABOLIC PATHWAYS Show tissue menu
ISOLATED
Protein interactions
Protein interactions
Methods
Human metabolism
Metabolic proteins
Methods
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

NEDD4L
Synonyms KIAA0439, NEDD4-2, RSP5
Gene descriptioni

Full gene name according to HGNC.

NEDD4 like E3 ubiquitin protein ligase
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Read more
Cancer-related genes
Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.
  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)

HUMAN PROTEIN ATLAS INFORMATIONi

Summary of RNA expression analysis and annotation data generated within the Human Protein Atlas project.

Single cell type
expression clusteri

The RNA data was used to cluster genes according to their expression across single cell types. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Colonocytes & Enterocytes - Gastrointestinal absorption & barrier (mainly)
Single cell type specificityi

The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected.

Cell type enhanced (Alveolar cells type 2, Colonocytes, Cone photoreceptor cells, Prostatic glandular cells, Renal collecting duct intercalated cells, Somatotrophs, Transitional alveolar cells, Urothelial cells)
Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Stomach - Digestion (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Low tissue specificity
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Not available
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.
Not available
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 18
Cytoband q21.31
Chromosome location (bp) 58044226 - 58401540
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

30
Ensembl ENSG00000049759 (version 109)
Entrez gene 23327
HGNC HGNC:7728
UniProt Q96PU5
GeneCards NEDD4L
ASSAYSi

Links to data of the different assays available in the Structure & Interaction resource of the Human Protein Atlas. Click on the miniature images to directly get to the respective section.

Interaction Metabolic
INTERACTIONi

In the Interaction part of this page network plots showing the gene's first-level interaction partners according to four different datasets are displayed, including a consensus network plot showing only interactions present in at least two of the datasets. By clicking on nodes the network can be expanded. In the network plots the nodes represent genes and edge color represent the number of datasets the interaction belongs to. In-house generated AlphaFold 3 predicted 3D structures for interactions in the consensus network are displayed by clicking on the blue symbols on the edges.

The highlight bar in the top of the plot can be used to color the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass. For genes categorised as single cell type or group specific the option to highlight interaction partners expressed in the same cell type will also be available in the highlight bar.

Custom highlighting of nodes is possible using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Interactions included are direct interaction and physical associations with high and medium confidence from IntAct, physical multivalidated interactions from BioGRID, interactions with>75% probability from BioPlex and significant physical interactions from OpenCell.

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Stomach - Digestion

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


Consensus
IntAct
BioGrid
OpenCell
BioPlex
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Non-commercial use only, subject to AlphaFold3 Output Terms of Use

Interaction:
Color scheme:
Confidence
Antibodies
Interactor
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PAE plot
Number of interactions: 7
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ARRDC36361100
LAPTM5212700
PRRG456603
SFN5912610210
YWHAE23512338332412
YWHAG25427143322213
YWHAZ2221643483248
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 8 View all protein interaction data in IntAct
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ARRDC36361100
DAZAP2101241702
ENTREP1412501
LAPTM5212700
PRRG456603
SFN5912610210
YWHAE23512338332412
YWHAG25427143322213
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 96
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ACVR1B241000
ADAP200200
AMOT985761
AMOTL1201850
ANXA2494400
ARRB126355900
ARRB221256800
ARRDC1461200
ARRDC36361100
ARRDC400400
ATP1B127910
BEST100200
BMPR1A3320021
BRAF171134301
CACNB101103
CEP55105628121
CLIC200200
CRTC354960
CUEDC1277019
CYBRD1019102
DDX54212780
DVL217467607
EGFR18727545806
FKBP312903
FOXO111103060
GPX400800
GRB10682030
HGS331788480
HNRNPD238106410
HSPA538322682586
IL6ST081301
KCNAB101100
KCNB100800
KCNH2001100
KCNQ111700
LAPTM5212700
LITAF5471000
LPAR1003054
MAP3K2762540
MT2A313800
NDFIP203601
NF25283100
NPC202414
NSRP1319162
OCLN3527018
OGG100600
PIK3CA6112431
PINK1161664099
PRKN1111140500
PRRG101204
PRRG456603
RAF13242196140
RHOB3230811
RNF11171542801
RPL30233883361
SCN5A05500
SCNN1A23500
SCNN1B22700
SCNN1G01500
SFN5912610210
SGK1061700
SLC22A1100100
SLC31A15015323
SLC7A711200
SLC9A312400
SMAD217236900
SMAD3285212802
SMAD7574600
SNCA2412615400
SP1172511410
SPHK201300
STK3541707
TNK27123601
TRAF315316914
UBAC1325905
UBC355946340
UBE2D1344012300
UBE2D2334113004
UBE2D3232612100
UBE2E1784706
UBE2E314253602
UBE2K18613530
UBE2L311115810
ULK116195361
USP72828212711
VDAC28216280
WBP2471511
WNK19927100
YAP13132304100
YWHAB183933372450
YWHAE23512338332412
YWHAG25427143322213
YWHAH130363951446
YWHAQ9061318796
YWHAZ2221643483248
YY1194787176
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 2
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
YWHAE23512338332412
YWHAZ2221643483248
NEDD4L has no defined protein interactions in BioPlex.
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

Gene NEDD4L is associated with 1 reactions in 1 different subsystems, and present in the compartments: Cytosol. Provided by metabolicatlas.org
Pathway / Subsystem Subsystem-associated compartments # proteins # metabolites # reactions for
this protein
Isolated Cytosol, Mitochondria, Peroxisome, Endoplasmic reticulum, Extracellular, Nucleus, Golgi apparatus 524 320 1
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.

Splice variant SwissProt TrEMBL Protein class Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
NEDD4L-201 Q96PU5
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
Show all
871 aa
100.8 kDa
No 0
NEDD4L-202 Q96PU5
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
911 aa
104.9 kDa
No 0
NEDD4L-203 Q96PU5
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
967 aa
111.3 kDa
No 0
NEDD4L-204 Q96PU5
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
955 aa
110 kDa
No 0
NEDD4L-205 Q96PU5
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
975 aa
111.9 kDa
No 0
NEDD4L-206 Q96PU5
A0A024R2A4
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
854 aa
98.2 kDa
No 0
NEDD4L-207 Q96PU5
A0A024R281
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
834 aa
96.3 kDa
No 0
NEDD4L-208 Q96PU5
A0A024R281
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
834 aa
96.3 kDa
No 0
NEDD4L-209 Q96PU5
A0A024R2A4
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
854 aa
98.2 kDa
No 0
NEDD4L-214 Q96PU5
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
947 aa
109.4 kDa
No 0
NEDD4L-215 K7ENS6
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
150 aa
17.6 kDa
No 0
NEDD4L-216 K7EQC5
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
15 aa
2 kDa
No 0
NEDD4L-220 K7ERN1
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
639 aa
74.2 kDa
No 0
NEDD4L-222 K7EN51
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
35 aa
4.3 kDa
No 0
NEDD4L-225 K7EKL1
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
106 aa
11.9 kDa
No 0
NEDD4L-236 A0A140TA85
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
10 aa
1.3 kDa
No 0
NEDD4L-237 A0A087WVI6
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
20 aa
2 kDa
No 0
NEDD4L-238 A0A1B0GVY1
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
1254 aa
140.8 kDa
No 0
NEDD4L-239 Q96PU5
A0A024R281
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
Show all
834 aa
96.3 kDa
No 0
NEDD4L-245 A0A6Q8PG81
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
394 aa
46.6 kDa
No 0
NEDD4L-247 A0A6Q8PFI7
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
948 aa
109.5 kDa
No 0
NEDD4L-248 A0A6Q8PHJ5
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
930 aa
107.6 kDa
No 0
NEDD4L-249 A0A6Q8PHE7
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
38 aa
4.4 kDa
Yes 0
NEDD4L-252 Q96PU5
A0A024R281
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
Show all
834 aa
96.3 kDa
No 0
NEDD4L-255 Q96PU5
A0A024R281
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
Show all
834 aa
96.3 kDa
No 0
NEDD4L-256 Q96PU5
A0A024R281
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
Show all
834 aa
96.3 kDa
No 0
NEDD4L-257 A0A6Q8PG51
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
863 aa
99.7 kDa
No 0
NEDD4L-258 A0A6Q8PGP5
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
942 aa
108.8 kDa
No 0
NEDD4L-259 Q96PU5
A0A024R281
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
Show all
834 aa
96.3 kDa
No 0
NEDD4L-262 A0A7P0Z498
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
618 aa
71.6 kDa
No 0
Show allShow less

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