We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PRKN
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • PRKN
INTERACTION INTERACTION METABOLIC PATHWAYS Show tissue menu
ISOLATED
Protein interactions
Protein interactions
Methods
Human metabolism
Metabolic proteins
Methods
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PRKN
Synonyms AR-JP, PARK2, parkin, PDJ
Gene descriptioni

Full gene name according to HGNC.

Parkin RBR E3 ubiquitin protein ligase
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Read more
Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.
  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)

HUMAN PROTEIN ATLAS INFORMATIONi

Summary of RNA expression analysis and annotation data generated within the Human Protein Atlas project.

Single cell type
expression clusteri

The RNA data was used to cluster genes according to their expression across single cell types. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Myocytes - Oxidative muscle function (mainly)
Single cell type specificityi

The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected.

Cell type enhanced (Bergmann glia, Cardiomyocytes, Myonuclei, Renal collecting duct intercalated cells, Sertoli cells)
Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Skeletal muscle - Muscle contraction (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Tissue enhanced (Skeletal muscle, Tongue)
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Nuclear speckles In addition localized to the Cytosol
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.
Not available
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband q26
Chromosome location (bp) 161347417 - 162727775
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000185345 (version 109)
Entrez gene 5071
HGNC HGNC:8607
UniProt O60260
GeneCards PRKN
ASSAYSi

Links to data of the different assays available in the Structure & Interaction resource of the Human Protein Atlas. Click on the miniature images to directly get to the respective section.

Interaction Metabolic
INTERACTIONi

In the Interaction part of this page network plots showing the gene's first-level interaction partners according to four different datasets are displayed, including a consensus network plot showing only interactions present in at least two of the datasets. By clicking on nodes the network can be expanded. In the network plots the nodes represent genes and edge color represent the number of datasets the interaction belongs to. In-house generated AlphaFold 3 predicted 3D structures for interactions in the consensus network are displayed by clicking on the blue symbols on the edges.

The highlight bar in the top of the plot can be used to color the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass. For genes categorised as single cell type or group specific the option to highlight interaction partners expressed in the same cell type will also be available in the highlight bar.

Custom highlighting of nodes is possible using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Interactions included are direct interaction and physical associations with high and medium confidence from IntAct, physical multivalidated interactions from BioGRID, interactions with>75% probability from BioPlex and significant physical interactions from OpenCell.

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Skeletal muscle - Muscle contraction

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


Consensus
IntAct
BioGrid
OpenCell
BioPlex
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Non-commercial use only, subject to AlphaFold3 Output Terms of Use

Interaction:
Color scheme:
Confidence
Antibodies
Interactor
Show surface:
Off
On
Autorotate:
Off
On
PAE plot
Number of interactions: 11
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
FBXO714754024
HDAC6161916712
HSP90AB1651461872219
MFN2441115
PDCD216338
PINK1161664099
RANBP27755195
RGS211161600
RHOT124610
TRIP1311721906
ZNF746111101
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 11 View all protein interaction data in IntAct
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
FBXO714754024
HDAC6161916712
HSP90AB1651461872219
MFN2441115
PDCD216338
PINK1161664099
RANBP27755195
RGS211161600
RHOT124610
TRIP1311721906
ZNF746111101
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 1405
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
AAAS105010
AAMP236102
AARS100500
AASDHPPT15502
ABCB1001403
ABCB711600
ABCD3432072
ABCE18124420
ABCF1001300
ABCF2001232
ABCF302200
ABHD1211710
ABHD14B00110
ABL126349570
ACAA21010124
ACACA462700
ACAD112111812
ACAD95039016
ACADSB00411
ACADVL01810
ACAT1001212
ACBD3131711
ACIN112834227
ACLY103251
ACO2001000
ACOT900710
ACOX100300
ACP100500
ACSF3163019
ACSL100100
ACSL3031504
ACSL4001100
ACTB772719511134
ACTBL21221311
ACTC1628937
ACTG13015751160
ACTN18265670
ACTN4101445181
ACTR1A192391617
ACTR214343614
ACTR310934139
ADD300810
ADPGK00200
ADRM116853113
ADSL00510
ADSS222803
AFDN8103350
AFG3L2012201
AGK237017
AGO2152877100
AGPS111130
AHCY241650
AHCYL13272300
AHNAK323712
AHSA15438200
AHSG01403
AIFM13513930
AIMP13226113
AIMP29336002
AIP682417
AKAP8L3501770
AKT15314319724
ALB0111015
ALDH16A122431
ALDH18A1041380
ALDH1B110990
ALDH2111000
ALDH3A2002100
ALDH5A100213
ALDH9A100310
ALDOA352912
ALG100200
AMBRA1774160
AMOT985761
ANAPC78530130
ANKFY1241600
ANLN1056820
ANXA1362321
ANXA1118540
ANXA2494400
AP1B1533030
AP1G1222430
AP1M16672006
AP2A1144600
AP2M1164065110
AP3B13514011
AP3D1001810
AP3M14111208
APEH02220
APEX1247110
API5221660
APMAP11560
APOB1220016
APP4431314110
APPL1153433206
APRT02400
ARCN18221104
ARF3121032
ARHGAP1231419
ARHGDIA892060
ARHGEF123800
ARHGEF2894050
ARIH1134703
ARMT100306
ARRB126355900
ARRB221256800
ASMTL18200
ASNS021110
ASS1126238
ATAD3A033310
ATAD3B001608
ATG511183329
ATIC01430
ATP1A1545351
ATP1B127910
ATP2A2244200
ATP5F1A9871211
ATP5F1B101476115
ATP5F1C224410
ATP5MF00300
ATP5PB141531053
ATP5PO6183468
ATP6AP181131116
ATP6V0D1146241810
ATP6V1A13027157
ATP6V1B2187332214
ATP6V1H8512160
ATXN103351339
ATXN2131333290
ATXN2L522280
ATXN33746410
BABAM2451804
BAG2171552769
BAG31657128015
BAG55133420
BAG68116960
BAX6142400
BCCIP391432
BCKDHA2210018
BCKDK236626
BCL218255500
BCL2L111254700
BCLAF14436180
BECN116495753
BOLA202200
BRD21156260
BRIX1145351521
BSG458780
BUB3463120
BYSL4211957628
BZW112420
BZW211651
C1QBP13211081324
C9orf724112700
CA200300
CACYBP453160
CAD223992
CALR7644437
CALU102220
CAMK2D5131800
CAND1777806
CANX130824238124
CAP1311930
CAPN1381717
CAPN1100100
CAPN2281200
CAPRIN1163491350
CAPZB10061336660
CARM16104430
CARS110210
CARS200800
CASK8123210
CBL313613130
CBR1133017
CBX31825117132
CCAR13512240
CCDC4715750550
CCNB11086976
CCND1141756011
CCNE1673335
CCT253121283697
CCT33111932060
CCT4245713235
CCT52729852345
CCT6A2710823756
CCT7328732681
CCT8188722520
CDC201897899
CDC27191655177
CDC34252404
CDC37651271721928
CDC5L40481321829
CDC73153144105
CDK1121913160
CDK11A012100
CDK229261411024
CDK5121846114
CDK5RAP35815010
CDK814654100
CDKN1A295093019
CEP55105628121
CFL17144464
CHAF1B10227414
CHCHD36382938
CHD4133188170
CHEK215195010
CHGB11200
CHPF00203
CIAO181440013
CISD101313
CKAP492651225
CKB352031
CLIC134900
CLINT1562993
CLP1210800
CLPB241840
CLPTM1L01410
CLPX001315
CLTA316511200
CLTC12139860
CMAS00550
CNDP201621
CNN300731
CNP011110
COASY12600
COPA14240780
COPB1121133124
COPB2131291224
COPG1164271911
COPS4141443114
COPZ111015377
COQ635603
CORO1A669014
CORO1B461032
CORO1C3129416
CORO700600
CPNE102400
CPNE301430
CPSF2551650
CPSF6368622120
CPT1A001200
CPVL20161110
CRLF3124202
CRNKL112331230
CRTAP334410
CS0018640
CSDE1122120
CSE1L684340
CSK6103030
CSNK2A1996724918422
CSTF1321142
CSTF3111035
CTBP1262297124
CTBP2272164230
CTH02101
CTNNB147852851313
CTNNBL1111119190
CTNND1794920
CTPS1221181
CTTN14564710
CUL13029170111
CUL2201190015
CUL3404577120
CUL4A71013800
CUL4B61116940
CUL5271681026
CYB5R106504
CYB5R395122160
CYP51A1102110
DAP313236936
DARS14328133
DARS22139129
DAZAP1131300
DBR110312
DCAF85916610
DCD121110
DCP1A181726145
DCTN48820120
DDB13922173649
DDB214440123
DDI200900
DDIT407500
DDOST266541080
DDX1653865
DDX17182066190
DDX185028626
DDX19A12601
DDX215921971680
DDX2312548016
DDX27203130
DDX39A292480
DDX39B2415110440
DDX3X6129400
DDX46211714
DDX4711931
DDX4912601
DDX52919105410
DDX5200905
DDX566523137
DDX62971561447
DEK322340
DHRS7B103124
DHX15121167130
DHX309641330
DHX948141261131
DIS34414024
DKC1159412044
DLD263712
DLST2552512
DNAJA112369199
DNAJA210665928
DNAJB1166441921
DNAJC30019015
DNAJC717568346
DNM1L472910
DNM29272180
DNMT111136010
DNPEP032014
DOCK7792960
DPM1231610
DPP311201
DPP901400
DPYSL2692003
DPYSL313500
DRG1209271850
DRG217600
DSP333513
DSTN451210
DTL112617
DTYMK00105
DUT02200
DVL217467607
DYNC1H1173761331
DYNC1I215643130
DYNC1LI116428349
DYNC1LI2611782
DYRK1A303014240
EDC31313221215
EDC45721130
EED12126660
EEF1A11312118411
EEF1A271025117
EEF1D5123600
EEF1G10949119
EEF2235290
EFTUD254151814630
EHD15519017
EHD401506
EIF2AK2211556815
EIF2B151310612
EIF2B3328217
EIF2B5669336
EIF2S161021211
EIF2S251522290
EIF2S3719191122
EIF3A171943547
EIF3B2715571060
EIF3D1626372110
EIF3E1925393310
EIF3F1442471010
EIF3G2011306810
EIF3H201140417
EIF3I167293712
EIF3L179303411
EIF4A114742402
EIF4A281227120
EIF4A3263370291
EIF4B6549130
EIF4G110963260
EIF4G2351540
EIF5A0101710
EIF5B041110
EIPR1557020
ELAC21010114
ELAVL1193149260
ELOC191662510
ELP1662115
ELP3111100
EMD167294120
EML202102
ENO1567851
EP300273437241
EPB41L24623013
EPB41L3754430
EPB41L5331420
EPHX1112215
EPPK1201326
EPRS1674794
EPS151795185
EPS8L205307
ERLIN28544103
ERO1A261000
ESYT24236120
ETF143840
ETFB221460
EXOC412192539
EXOSC101093990
F13A1012300
FAF1576005
FAF2226443
FAM120A9239150
FAM20B09507
FAM98A321390
FAM98B42812
FAR101510
FARSA241311
FARSB13711
FASN263994
FBL1510186128
FBXL1811800
FBXO22222000
FBXO3221300
FBXO714754024
FBXW11141614200
FBXW7112115303
FDPS06871
FDXR00100
FECH241150
FEN1551591
FERMT2131500
FH110900
FIG423321
FKBP49103251
FKBP549169315219
FKBP8213366460
FLII322708
FLNB583060
FLNC682530
FLOT14933016
FNTB195017
FSCN1032100
FSIP200200
FTSJ3195501445
FUBP1123400
FUBP3222610
FUS142815060
FXR122248140
FXR221644881
G3BP13515146691
G3BP2374681650
G6PD111360
GALK101401
GANAB102240
GAPDH92997121
GAPVD1631570
GARS1043100
GART001500
GATAD2B1420451211
GBF15219527
GCDH12300
GCLC11302
GDI1264332326
GDI2153252314
GFM1412134
GFPT101600
GFPT212209
GHDC00302
GIPC1862727
GLRX312811663
GLS111900
GLUD13319211
GMDS02410
GMPPA110300
GMPS00910
GNA1112639
GNA132315224
GNAI23112400
GNAS132510
GNB2242648063
GNL100201
GNL2101351750
GNL39638440
GOPC6292500
GOT102600
GOT200400
GPD200400
GPHN221040
GPI001600
GPR378171600
GPS111134020
GPSM111800
GRB28216620635
GRHPR01600
GRIN2B341900
GRSF12117020
GRWD1303851
GSK3A15154765
GSPT1124251290
GSTP12221080
GTF3C1332530
GTF3C4331735
GTF3C5361640
GTPBP101608
GTPBP4134482049
GYS1436933
H1-2759460
H2AC100310
H2AZ200800
H2BC18001500
H4C1325635605
HACD3112190
HADHA4949410
HADHB123135
HARS2319049
HAT16262113
HAUS4221014
HBA11132017
HBD051216
HBS1L7213110
HCFC1171873147
HDAC1104653757642
HDAC268192278812
HDAC3121910470
HDAC410225520
HDAC6161916712
HDGF002430
HDLBP5343814
HERC52017422
HGS331788480
HIF1A283613900
HINT1001710
HK125830
HK223554
HLA-A244603
HLA-B25700
HMBS02100
HMGCS101149
HNRNPA12212208280
HNRNPA2B11717109260
HNRNPA310266350
HNRNPAB8249180
HNRNPC4334114500
HNRNPD238106410
HNRNPDL11641290
HNRNPF6455140
HNRNPH14332128851
HNRNPH2362355
HNRNPH3322470
HNRNPK3253126210
HNRNPL334118701
HNRNPM121685180
HNRNPR19375320
HNRNPU348202460
HNRNPUL18174670
HOMER17111374
HP1BP34329190
HPRT1110530
HRNR00703
HS2ST100470
HSD11B1L00100
HSD17B10554430
HSD17B12152184
HSD17B4001000
HSDL2001110
HSP90AA15157369230
HSP90AB1651461872219
HSP90B18579167
HSPA137810225
HSPA1A1731800
HSPA1L71023110
HSPA4165129545
HSPA4L512762
HSPA538322682586
HSPA8654545729101
HSPA991281412
HSPB13013910534
HSPD120381391145
HSPH18147220
HTRA25554010
HYOU1224217
IARS16137178
IARS2002462
IDH119720
IDH2006018
IDH3A12700
IDH3B00500
IDH3G12403
IGF2BP121366751
IGF2BP2234290
IGF2BP311371370
IKBKG44629850
ILF2148903224
ILF38461761551
ILK12185646
ILVBL01940
IMPDH2272722
IPO519751370
IQGAP110217582
IRAK112125310
IRF36122905
IVD025012
JMJD68143470
JUP7155420
KARS1343180
KDELR1033022
KDM3B00531
KHDRBS1172265150
KHSRP012410
KIF11101203
KIF3A448312
KIF3B25422
KIF5B121838113
KLC1961990
KMT2C652120
KPNA2313785437
KPNA4182233433
KPNA6161935224
KPNB136141057111
KYAT300101
LANCL203301
LAP308520
LARP1674700
LARP42221120
LARS1922378
LARS2205027
LBR77262122
LDB112122600
LDHA232931
LDHB382161
LGALS3BP7103731
LIMA1543920
LLGL1401948
LMAN1343354
LMNA1754239323
LMNB11515581011
LMNB22221664
LONP212515
LRCH223750
LRPPRC776882
LRRC4012510
LRRC4700350
LRRK2361086900
LSG1209190
LTA4H01120
LUC7L2141741014
LUC7L3121050
MAEA9131620
MAGED2212030
MAGT1111251015
MAP2K1141032130
MAP3K711137644
MAP4K47429180
MAPK11934123512
MAPKAPK25420221
MAPT111918800
MARS14124164
MAT2A2141521
MATR341411600
MATR380116140
MBNL200100
MCCC2221000
MCM240481081021
MCM36194353
MCM4127441215
MCM55194912
MCM61617421115
MCM71526721124
MCMBP8121710
MDH102950
MDH2103470
MDM2476126100
METAP115202
METTL178113100
MFN111730
MFN2441115
MIF2415910
MKRN2192411
MMS1910834012
MOV1010978521
MRE11676550
MRI107100
MRPL3721231051
MRPS15429342
MRPS18B111627041
MRPS216027262
MRPS2214140816
MRPS27134331062
MRPS306211668
MRPS54021048
MRPS711030845
MRPS916234851
MT-CO2572201
MTA214684179
MTARC101100
MTCH2017505
MTHFD1001541
MTMR9716904
MTOR2121781317
MTPAP4410315
MYBBP1A5362140
MYH91013105262
MYL12B33973
MYO612657150
MYO9B206150
NAA15441000
NACA421991
NACC10111501
NADK200200
NAE145827
NAMPT33711
NAP1L11312501118
NAP1L4112307
NARF00300
NARS101503
NARS2003013
NAT109240235
NAXE10210
NBN10125610
NCAPD23312217
NCAPH74211312
NCKAP121929350
NCL38161843824
NCLN2412170
NDRG141422215
NDUFA103117111
NDUFA4014800
NDUFS211539013
NDUFV13174400
NEDD4L789620
NEDD89226702
NEK2962670
NELFB8615152
NFS112800
NIPSNAP1252310
NKRF95252140
NLE1311305
NLRP3002800
NMD311663
NME16151800
NME2341600
NONO81165131
NOP2476160
NOP56133129618
NOP589349172
NPEPPS001101
NPLOC4692750
NPM1112303472080
NQO102820
NSDHL337204
NSF137263917
NSUN23124112
NT5C2110207
NT5DC200600
NTPCR021103
NUDC6143244
NUDCD1832270
NUDT1910703
NUP155234650
NUP214923090
NUP546421074
NUP85791707
NUP883314103
NUP936626120
NUP988236100
NXN00202
OAS355800
OAT011090
OCRL7171620
OGT101479165
OLA1011010
OPA1251600
OPTN2312871214
ORC5451100
OSBP638177
OSBPL1131640
OSBPL9331050
OXCT1001000
OXSR13413533
P4HA11227210
P4HA235640
P4HB4414783
PA2G492029192
PAAF1141326150
PABPC1202514400
PABPC303303
PABPC411370170
PAF1111037129
PAFAH1B1161730202
PAFAH1B223402
PAFAH1B338402
PAICS291860
PAK212192693
PALLD121100
PANK4002010
PAPSS100200
PAPSS203310
PARD6B12191835
PARK77214910
PARP180282811581
PATL17151655
PC01508
PCBP110188021
PCBP2443420
PCCA12500
PCCB326021
PCMT1231800
PCNA34371501014
PCYOX1123119
PDCD216338
PDCD6IP14154090
PDE1200600
PDHA14410121
PDIA3785012
PDIA44860214
PDIA6162310
PDK1143500
PDK3122103
PDLIM1441028
PDLIM5191106
PDP103500
PDXK00100
PELO420801
PES17436110
PFAS00701
PFKL142400
PFKM231000
PFKP144000
PFN112345250
PGAM1231102
PGAM5102220
PGD00700
PGK1453251
PGLS02200
PGM1011220
PGM212701
PGM300509
PGP00300
PGS100100
PHB12713010
PHB2248121
PHF6001200
PHGDH2129250
PICALM3224160
PICK1102763609
PIGK428619
PIGT346185
PIK3C3762282
PINK1161664099
PIP4K2C208415
PKM3116440
PKN17592030
PKN23212519
PLAA35636
PLCG111274700
PLEC274310
PLK13551218510
PLRG110731170
PLS3211114
PM20D2018200
PML121515950
PMPCA323205
PMPCB102535
PMS2121001
PNN119452418
PNP09100
POFUT100300
POLA206911
POLD191131218
POLD2451007
POLR1C348846470
POLR2B49381878
POLR3B251333611
PPAT11601
PPFIA110113244
PPIA3117732
PPIL4231213
PPM1F12501
PPM1G17437437
PPME16215312
PPOX001026
PPP1R77301210
PPP2CA55301116823
PPP2R1A51351231547
PPP2R2A71038012
PPP2R2D17138031
PPP2R5C461800
PPP3CA242230
PPP5C13162661
PPWD1001102
PRDX13103961
PRDX21627412
PRDX4361930
PRDX6072911
PREB208416
PREP01200
PRIM1121008
PRIM212917
PRKAA173340100
PRKAA28793003
PRKACB152800
PRKAG16211417
PRKAR1A8153149
PRKAR2A11736134
PRKCD093413
PRKCI11143453
PRKDC1113143171
PRMT1193614200
PRMT313717
PRMT519538406
PRPF193510874025
PRPF33337572621
PRPF31111185700
PRPF38B01300
PRPF421845210
PRPF40A5053260
PRPF4B245367324
PRPF62518602514
PRPF833221651814
PRPS157913021
PRPSAP135510
PRRC2C002300
PRSS100200
PSAT115760
PSMA13714578240
PSMA3225389130
PSMA43915654110
PSMA5406634422
PSMA6282666279
PSMA7342067318
PSMB23114632719
PSMB33414523120
PSMB5241752188
PSMB624648207
PSMC13624733314
PSMC23516763415
PSMC34522714321
PSMC4431772590
PSMC539311211925
PSMC63646603313
PSMD1211068190
PSMD102421401621
PSMD113917593913
PSMD12419604720
PSMD13352051390
PSMD1413910138
PSMD24131984013
PSMD34116845315
PSMD43834992416
PSMD63830572913
PSMD72311542016
PSMD81055038
PSMD991328130
PSPC1205332700
PTBP1675330
PTCD312338535
PTEN111813000
PTGES3358616631
PTPN1132777118
PTPN1119308200
PTPN5081500
PUF6013244100
PUS100500
PWP1201052
PYCR1411769
PYGB46818
PYGL22652
QARS1125329010
RAB1B95211910
RAB21208136
RAB355318511
RAB7A3011131361
RAC13361111150
RACK156991442081
RAD23A9423715
RAD23B7164702
RAD9A433303
RALY8651160
RAN3288756611
RANBP1419450
RANBP27755195
RANGAP19723223
RARS1342090
RBBP44136145400
RBBP51295870
RBBP73517112735
RBM1222785
RBM14181258990
RBM225615180
RBM255333238
RBM2611870
RBM33408240
RBM39147252432170
RBM8A2612432340
RBMX322871402
RCC1L3310023
RCC2101120
RCN21417010
RECQL331311
REL121442555
RELA3658174130
RFC1454100
RFC2642180
RFC35720415
RFC49629155
RFC5102230126
RFFL001600
RGS211161600
RHOT124610
RHOT24417115
RIC8A441600
RIPK113185709
RIPK3551400
RNF4110153615
RNH1451419
RNPEP00230
RO6031660
RPA171042011
RPA2111537620
RPL1044312541135
RPL10A236943958
RPL1174101341360
RPL1270741910
RPL1355910251192
RPL13A3227136117
RPL144361064198
RPL15226942626
RPL1720183094
RPL18206953128
RPL18A136871148
RPL19726114120109
RPL218272391
RPL22121668520
RPL2345891712
RPL23A4191153699
RPL2411383333
RPL267243013
RPL27145604010
RPL27A13360425
RPL28117473139
RPL292238152
RPL34331170185
RPL30233883361
RPL3161814542111
RPL32113474210
RPL348333352
RPL355238145162
RPL35A4529135
RPL3614876382
RPL37A147742228
RPL385354380
RPL4929147124133
RPL5981213921615
RPL61921313714
RPL7175106327
RPL7A51611731137
RPL8243873481
RPL91828813112
RPLP058611138162
RPN13310135653
RPN233399602
RPS113861011215
RPS129467353
RPS132851013727
RPS14267863527
RPS15A14894462
RPS16102513929547
RPS17121512312
RPS18755225
RPS1953811244127
RPS250812050120
RPS20255111497
RPS2315485416
RPS2516783464
RPS2612373436
RPS273653013
RPS27A51553012
RPS332161444524
RPS3A375130052
RPS4X20131075811
RPS5204913914
RPS694427140105
RPS6KA1482810
RPS6KA3762546
RPS713486522
RPS844411359137
RPS9143103012
RPSA3211954079
RPTOR151551516
RRAGC741607
RRM1221010
RSL1D1126522016
RTCB8522382
RTF1331500
RTRAF682072
RUVBL152161292939
RUVBL2671114210333
SACM1L926152023
SAE1379113
SAMHD1442000
SAMM504424119
SARS1217711
SARS211504
SART12313522712
SCRIB8303400
SCYL18216140
SDHA473029
SEC16A6559100
SEC23A102519111
SEC23B5121583
SEC24A22922
SEC24C241151
SEC31A552140
SEC61A17333200
SEH1L342110
SELENBP1246021
SEPTIN10521340
SEPTIN119617110
SEPTIN210918140
SEPTIN59151273
SEPTIN78918110
SEPTIN88310130
SEPTIN9642790
SERBP1166151350
SERPINB100200
SERPINB600200
SERPINH10272340
SF19143730
SF3A16099712013
SF3A24250724913
SF3A32111462210
SF3B156910510723
SF3B24122824312
SF3B33512815845
SF3B4294049287
SFPQ131370171
SFXN12159329
SGPL112961320
SHMT106400
SHMT2393003
SKP215139516
SLC11A200320
SLC16A12014110
SLC25A1001500
SLC25A1016900
SLC25A11082002
SLC25A13112108
SLC25A2200908
SLC25A2400200
SLC25A2500500
SLC25A3002500
SLC25A42312040
SLC25A5113622
SLC25A631319059
SLC2A301200
SLC33A101429
SLFN11001800
SMAD3285212802
SMARCA5151876277
SMARCAD1202520
SMARCD11710551160
SMARCD214440150
SMC1A1713712311
SMS00500
SMU14101980
SNCA2412615400
SNCAIP121200
SND1643481
SNRNP2003014893113
SNRNP403912713329
SNRNP701611168110
SNRPB79281112170
SNTB2561520
SNX18292170
SNX27172196
SNX27724170
SNX3011222
SNX5341462
SNX6582226
SNX9101814110
SORD00600
SPART091420
SPATA525530
SPTBN1374200
SPTLC1237260
SPTLC221629
SQSTM1324031220
SRP54518346
SRP683644417920
SRP722423114915
SRPK1303069206
SRPRA21202114
SRPRB71202815
SRRM215671139
SRRT7223240
SRSF12321751192
SRSF116112211
SRSF4661431
SRSF610736240
SSB2875213210
SSRP161910733328
ST13351700
STAM212321891
STAT3255910700
STIM162129413
STIP1132192166
STK2613823370
STK42317947247
STOML2031410
STRAP14633911
STRN411425109
STT3A681970
STT3B15528543
STUB12657192020
STXBP15161230
SUCLA2071510
SUDS31052179
SUMO1266155130
SUMO400240
SUPT5H37868910
SURF415840
SWAP7003300
SYNCRIP19794280
SYT1114204
TAF5532020
TAGLN2151621
TARDBP161417470
TARS1141010
TARS20118029
TAX1BP112583300
TBC1D15381010
TBC1D22A01100
TBC1D2400100
TBC1D48315130
TBCE00200
TBCE00200
TBK1223074114
TBL1XR1263003
TBL2119025
TBRG4018900
TCP12311851957
TECR32217100
TES232000
TFG5451210
TFRC32311210
THOC2322803
THOC312120113
THUMPD1113010
THUMPD311405
TIMM44051230
TIPRL461300
TJP28629100
TKT012010
TLE3113900
TLK28121750
TLN1652425
TM9SF32110515
TMEM33111390
TMPO9671181
TNPO17530270
TOLLIP16423269
TOM1321250
TOMM40102381126
TOMM70001850
TOP14961012591
TP5312316670450
TPI1042800
TPM35252700
TPP119910
TPP203379
TPT151519401
TRA2B171842220
TRAF25324012520
TRAF6316015503
TRAFD114300
TRAP12133151
TRIM2132410700
TRIM253319000
TRIM26272100
TRIM27202356300
TRIM28109243466894
TRIP1311721906
TRIP69902429
TRMT102500
TRMT10C111111
TRMT500110
TRMU01100
TSEN214510
TSG101215061156
TSR1331596710
TTC3801200
TTLL12457111
TUBA1A129900121
TUBA1B224494613
TUBA1C10335445
TUBAL300200
TUBB221889082
TUBB2A10920130
TUBB2B318330
TUBB4A4216020
TUBB4B141529313
TUBB62427113
TUBG11065583
TUBGCP3001700
TUFM156203
TXN7262431
U2AF22627133250
U2SURP10532300
UAP1L100100
UBA15966150
UBA2431222
UBA338520
UBAP2026700
UBAP2L343220
UBASH3A071400
UBC355946340
UBE2C021210
UBE2D1344012300
UBE2D2334113004
UBE2D3232612100
UBE2D425403402
UBE2E1784706
UBE2E29173302
UBE2G103711
UBE2G233920
UBE2J13341509
UBE2J207406
UBE2L311115810
UBE2L69131701
UBE2M676460
UBE2N17266620
UBE2O227741229
UBE2S122403
UBE2T021100
UBE2V13231100
UBE2Z110500
UBLCP11121013
UBR4013000
UBXN1342700
UBXN6711181142
UCHL15293110
UCHL538978370
UCKL1112011
UFL111335120
UFSP2023132
UGDH00130
UGP204300
UMPS01200
UPF1331789520
UPF2661852
UQCRC13292121
UQCRC2264201
USP155108530
USP33111700
USP399332204
USP47031304
USP9X229500
UTP181110021
UVRAG111027161
VARS1432107
VAT100710
VCP5756348435
VDAC191577222
VDAC28216280
VDAC33332120
VDR7124200
VIM36881091425
VPS3511826564
VPS4510420711
VTA1579111
VTN210504
WARS102700
WDFY1314113
WDHD1111113
WDR1222550
WDR12521585
WDR18631079
WDR2612172360
WDR33221943
WDR4111600
WDR7000300
WDR7710651812
WNK19927100
WRNIP1361900
XPO12571292910
XRCC51418135132
XRCC62123231152
XRN1221750
XRN2593810
YAP13132304100
YARS1011800
YARS28210286
YBX121311221236
YBX3122700
YES144432230
YLPM15315200
YTHDC171719120
YTHDC22114735
YTHDF2006650
YWHAB183933372450
YWHAE23512338332412
YWHAG25427143322213
YWHAH130363951446
YWHAQ9061318796
YWHAZ2221643483248
ZC3H15216150
ZC3H18121133022
ZC3HAV110565776
ZFR50292222
ZNF20711530
ZNF27700201
ZNF3266720257
ZNF5122112848
ZNF6221210112
ZNF746111101
ZYX10142651
Show allShow less
PRKN has no defined protein interactions in OpenCell.
PRKN has no defined protein interactions in BioPlex.
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

Gene PRKN is associated with 1 reactions in 1 different subsystems, and present in the compartments: Cytosol. Provided by metabolicatlas.org
Pathway / Subsystem Subsystem-associated compartments # proteins # metabolites # reactions for
this protein
Isolated Cytosol, Mitochondria, Peroxisome, Endoplasmic reticulum, Extracellular, Nucleus, Golgi apparatus 524 320 1
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.

Splice variant SwissProt TrEMBL Protein class Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PRKN-202 B1AKC3
Metabolic proteins
Predicted intracellular proteins
Human disease related genes
368 aa
40.5 kDa
No 0
PRKN-204 O60260
Enzymes
Metabolic proteins
Transporters
Predicted intracellular proteins
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Show all
316 aa
35.6 kDa
No 0
PRKN-205 O60260
Enzymes
Metabolic proteins
Transporters
Predicted intracellular proteins
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Show all
437 aa
48.7 kDa
No 0
PRKN-206 O60260
X5DR79
Enzymes
Metabolic proteins
Transporters
Predicted intracellular proteins
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Show all
465 aa
51.6 kDa
No 0
PRKN-208 A0A087X0Z9
Metabolic proteins
Predicted intracellular proteins
Human disease related genes
176 aa
19.7 kDa
No 0
PRKN-210 A0A6I8PII0
Metabolic proteins
Predicted intracellular proteins
Human disease related genes
115 aa
13.4 kDa
No 0
PRKN-217 A0A6I8PRS9
Metabolic proteins
Predicted intracellular proteins
Human disease related genes
63 aa
7.3 kDa
No 0
Show allShow less

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo