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G3BP2
HPA
RESOURCES
  • TISSUE
  • BRAIN
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Expression
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Main location
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Annotation
Tissue
Category
Tau score
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Reliability
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Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
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Tau score
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Tau score
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Tau score
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Tau score
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Cancer
Prognosis
Cancer
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Cancer
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Tau score
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Variants
Interacting gene (ensg_id)
Type
Number of interactions
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ipTM
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Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • G3BP2
INTERACTION INTERACTION
Protein interactions
Protein interactions
Methods
Human metabolism
Metabolic proteins
Methods
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

G3BP2
Synonyms KIAA0660
Gene descriptioni

Full gene name according to HGNC.

G3BP stress granule assembly factor 2
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.
  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)

HUMAN PROTEIN ATLAS INFORMATIONi

Summary of RNA expression analysis and annotation data generated within the Human Protein Atlas project.

Single cell type
expression clusteri

The RNA data was used to cluster genes according to their expression across single cell types. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

T-cells - Adaptive immunity: Regulation (mainly)
Single cell type specificityi

The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected.

Cell type enhanced (Myonuclei)
Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Non-specific - Basic cellular processes (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Low tissue specificity
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Cytosol
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.
Not available
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband q21.1
Chromosome location (bp) 75641849 - 75724589
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

51
Ensembl ENSG00000138757 (version 109)
Entrez gene 9908
HGNC HGNC:30291
UniProt Q9UN86
GeneCards G3BP2
ASSAYSi

Links to data of the different assays available in the Structure & Interaction resource of the Human Protein Atlas. Click on the miniature images to directly get to the respective section.

Interaction
INTERACTIONi

In the Interaction part of this page network plots showing the gene's first-level interaction partners according to four different datasets are displayed, including a consensus network plot showing only interactions present in at least two of the datasets. By clicking on nodes the network can be expanded. In the network plots the nodes represent genes and edge color represent the number of datasets the interaction belongs to. In-house generated AlphaFold 3 predicted 3D structures for interactions in the consensus network are displayed by clicking on the blue symbols on the edges.

The highlight bar in the top of the plot can be used to color the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass. For genes categorised as single cell type or group specific the option to highlight interaction partners expressed in the same cell type will also be available in the highlight bar.

Custom highlighting of nodes is possible using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Interactions included are direct interaction and physical associations with high and medium confidence from IntAct, physical multivalidated interactions from BioGRID, interactions with>75% probability from BioPlex and significant physical interactions from OpenCell.

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Fields »
e.g. Brain enriched, Localized to mitochondria, Non-specific - Basic cellular processes

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


Consensus
IntAct
BioGrid
OpenCell
BioPlex
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Non-commercial use only, subject to AlphaFold3 Output Terms of Use

Interaction:
Color scheme:
Confidence
Antibodies
Interactor
Show surface:
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Autorotate:
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PAE plot
Number of interactions: 37
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ATXN2L522280
CAPRIN1163491350
COIL163733617
DHX309641330
EIF4A114742402
EIF4G110963260
FAM120A9239150
FMR1101743110
G3BP13515146691
GNL2101351750
GTPBP4134482049
HDLBP5343814
IGF2BP121366751
IGF2BP311371370
LARP4B517241012
LSM12451370
NUFIP2166229332
RPL1044312541135
RPL15226942626
RPL18206953128
RPL22L111590
RPL2411383333
RPL27145604010
RPL3161814542111
RPL355238145162
RPS132851013727
RPS17121512312
RPS1953811244127
RPS20255111497
RPS2417283400
RPS694427140105
RPS844411359137
SERBP1166151350
STAU13213371390
TOP2A204771340
TRIM253319000
USP10587310
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 4 View all protein interaction data in IntAct
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
CAPRIN1163491350
PRRC2B141700
TRIM253319000
USP10587310
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 68
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ACE2101327800
ANLN1056820
ATXN2L522280
AURKB132097318
BMI114188805
CAPRIN1163491350
COIL163733617
DDX62971561447
DHX309641330
EIF4A114742402
EIF4G110963260
ESR1345947900
FAM120A9239150
FMR1101743110
FXR122248140
FXR221644881
G3BP13515146691
GNL2101351750
GTPBP4134482049
HDLBP5343814
IGF2BP121366751
IGF2BP311371370
LARP4B517241012
LSM12451370
MAPT111918800
MDM2476126100
MEPCE2201491316
NFKBIA15246242
NUFIP2166229332
NUP214923090
NUP62206140818
PABPC1202514400
PABPC411370170
PRKN1111140500
PRMT519538406
PRPF833221651814
PRRC2A133300
RIOK112255194
RPL1044312541135
RPL15226942626
RPL18206953128
RPL22L111590
RPL2411383333
RPL27145604010
RPL3161814542111
RPL355238145162
RPS132851013727
RPS17121512312
RPS1953811244127
RPS20255111497
RPS2417283400
RPS694427140105
RPS844411359137
RPS9143103012
SERBP1166151350
SPOP9298602
STAU13213371390
STK42317947247
TOP2A204771340
TOP3B3109550
TP5312316670450
TRIM253319000
UBAP2L343220
USP10587310
WDR36002500
WWP2185214011
YTHDF121338026
YTHDF2006650
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 165
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ABCE18124420
ADAR8239190
AIMP13226113
ATXN2L522280
C7orf50259638
CAPRIN1163491350
CAPZB10061336660
CCDC124015290
CKAP492651225
CKMT2151186
CNOT11101214319
COIL163733617
DHX29107101
DHX309641330
DHX948141261131
DRG1209271850
EDC45721130
EDF126770
EIF2S161021211
EIF2S251522290
EIF2S3719191122
EIF3A171943547
EIF3B2715571060
EIF3E1925393310
EIF3F1442471010
EIF3G2011306810
EIF3H201140417
EIF3I167293712
EIF3J106172612
EIF3K16922517
EIF3L179303411
EIF3M14923499
EIF4A114742402
EIF4B6549130
EIF4G110963260
EPRS1674794
EXOSC2158241014
EXOSC314921615
FAM120A9239150
FAU7227271
FMR1101743110
G3BP13515146691
GLA12223
GLUD13319211
GNL2101351750
GNL39638440
GTPBP4134482049
H1-04426190
H1-103018500
HDLBP5343814
HGS331788480
HP1BP34329190
HSD17B10554430
HSPH18147220
IARS16137178
IGF2BP121366751
IGF2BP311371370
ILF38461761551
LARP1B026370
LARP42221120
LARP4B517241012
LRRC5951490130
LSM12451370
LTV184182128
LYAR1729341874
MARS14124164
MTDH7232221
MTPN10620
NCL38161843824
NOB1518192
NOMO3112177
NPM1112303472080
NUFIP2166229332
PA2G492029192
PDCD47827230
PNO16312172
POP1123331834
RACK156991442081
RARS1342090
RBM8A2612432340
RFC49629155
RPL1044312541135
RPL10A236943958
RPL1174101341360
RPL1270741910
RPL1355910251192
RPL13A3227136117
RPL144361064198
RPL15226942626
RPL17-C18orf32000350
RPL18206953128
RPL18A136871148
RPL218272391
RPL22121668520
RPL22L111590
RPL2345891712
RPL23A4191153699
RPL2411383333
RPL26L1232392467
RPL27145604010
RPL27A13360425
RPL28117473139
RPL292238152
RPL30233883361
RPL3161814542111
RPL32113474210
RPL348333352
RPL355238145162
RPL3614876382
RPL385354380
RPL4929147124133
RPL5981213921615
RPL61921313714
RPL7175106327
RPL7A51611731137
RPL8243873481
RPL91828813112
RPLP058611138162
RPLP2212653925
RPS103067228120
RPS113861011215
RPS129467353
RPS132851013727
RPS14267863527
RPS15A14894462
RPS16102513929547
RPS17121512312
RPS1953811244127
RPS250812050120
RPS20255111497
RPS2111538392
RPS2315485416
RPS2417283400
RPS2516783464
RPS2612373436
RPS28131043443
RPS332161444524
RPS4X20131075811
RPS5204913914
RPS694427140105
RPS713486522
RPS844411359137
RPSA3211954079
RSL1D1126522016
RTRAF682072
SDAD13061516
SEC61B5131721600
SERBP1166151350
SKIC3318910
SKIC81830291722
SND1643481
SRP14185294469
SRP19811315310
SRP54518346
SRP683644417920
SRP722423114915
SSR44014320
STAU13213371390
TOP2A204771340
TRIP44025105
TRMT1L218341
TSR1331596710
UPF1331789520
USP19102240
ZC3H15216150
Show allShow less
G3BP2 has no defined protein interactions in BioPlex.
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

G3BP2 is not a metabolic protein
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.

Splice variant SwissProt TrEMBL Protein class Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
G3BP2-201 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-202 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-203 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-204 D6R9A4
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
31 aa
3.7 kDa
No 0
G3BP2-206 D6RB17
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
198 aa
22.5 kDa
No 0
G3BP2-208 D6RBR0
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
102 aa
11.4 kDa
No 0
G3BP2-210 D6RAC7
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
141 aa
16 kDa
No 0
G3BP2-212 D6R9A4
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
31 aa
3.7 kDa
No 0
G3BP2-214 D6R9A4
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
31 aa
3.7 kDa
No 0
G3BP2-216 D6RBW8
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
115 aa
13 kDa
No 0
G3BP2-217 D6R9A4
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
31 aa
3.7 kDa
No 0
G3BP2-220 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-225 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-227 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-229 D6R9A4
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
31 aa
3.7 kDa
No 0
G3BP2-231 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-233 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-235 A0A7I2V3E2
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
381 aa
43.4 kDa
No 0
G3BP2-237 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-238 D6R9A4
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
31 aa
3.7 kDa
No 0
G3BP2-239 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-240 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-242 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-243 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-245 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-246 A0A7I2V3Z6
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
85 aa
10 kDa
No 0
G3BP2-247 D6R9A4
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
31 aa
3.7 kDa
No 0
G3BP2-249 A0A7I2V382
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
74 aa
8.3 kDa
No 0
G3BP2-250 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-251 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-252 A0A7I2V3R7
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
62 aa
7.3 kDa
No 0
G3BP2-253 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-254 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-257 A0A7I2V547
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
63 aa
7.5 kDa
No 0
G3BP2-258 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-260 A0A7I2V3P9
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
388 aa
43.5 kDa
No 0
G3BP2-261 A0A7I2V3E2
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
381 aa
43.4 kDa
No 0
G3BP2-262 A0A7I2V3P9
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
388 aa
43.5 kDa
No 0
G3BP2-263 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-264 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-265 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-266 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-267 A0A7I2V647
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
355 aa
40.2 kDa
No 0
G3BP2-268 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-269 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-271 A0A7I2YQD9
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
424 aa
47.7 kDa
No 0
G3BP2-274 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
G3BP2-275 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-280 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-286 Q9UN86
A0A024RDE5
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
482 aa
54.1 kDa
No 0
G3BP2-287 Q9UN86
A0A024RDB2
Predicted intracellular proteins
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
449 aa
50.8 kDa
No 0
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