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DDOST
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
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Keyword
Chromosome
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Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
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Cluster
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Cancer
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Category
Cancer
Category
Tau score
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Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • DDOST
INTERACTION INTERACTION METABOLIC PATHWAYS Show tissue menu
N-GLYCAN METABOLISM
Protein interactions
Protein interactions
Methods
Human metabolism
Metabolic proteins
Methods
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

DDOST
Synonyms KIAA0115, OST, OST48, WBP1
Gene descriptioni

Full gene name according to HGNC.

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Read more
Disease related genes
Essential proteins
Human disease related genes
Metabolic proteins
Plasma proteins
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.
  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)

HUMAN PROTEIN ATLAS INFORMATIONi

Summary of RNA expression analysis and annotation data generated within the Human Protein Atlas project.

Single cell type
expression clusteri

The RNA data was used to cluster genes according to their expression across single cell types. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Non-specific - Secretory pathway (mainly)
Single cell type specificityi

The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected.

Cell type enhanced (Cytotrophoblasts, Extravillous trophoblasts, Migrating cytotrophoblasts, Plasma cells, Syncytiotrophoblasts)
Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Non-specific - Protein processing (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Low tissue specificity
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Endoplasmic reticulum
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.
Not available
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p36.12
Chromosome location (bp) 20651767 - 20661544
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000244038 (version 109)
Entrez gene 1650
HGNC HGNC:2728
UniProt P39656
GeneCards DDOST
ASSAYSi

Links to data of the different assays available in the Structure & Interaction resource of the Human Protein Atlas. Click on the miniature images to directly get to the respective section.

Interaction Metabolic
INTERACTIONi

In the Interaction part of this page network plots showing the gene's first-level interaction partners according to four different datasets are displayed, including a consensus network plot showing only interactions present in at least two of the datasets. By clicking on nodes the network can be expanded. In the network plots the nodes represent genes and edge color represent the number of datasets the interaction belongs to. In-house generated AlphaFold 3 predicted 3D structures for interactions in the consensus network are displayed by clicking on the blue symbols on the edges.

The highlight bar in the top of the plot can be used to color the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass. For genes categorised as single cell type or group specific the option to highlight interaction partners expressed in the same cell type will also be available in the highlight bar.

Custom highlighting of nodes is possible using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Interactions included are direct interaction and physical associations with high and medium confidence from IntAct, physical multivalidated interactions from BioGRID, interactions with>75% probability from BioPlex and significant physical interactions from OpenCell.

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Non-specific - Protein processing

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


Consensus
IntAct
BioGrid
OpenCell
BioPlex
Highlight:
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Subcell location
Predicted location
Cell type specificity
Protein class

Non-commercial use only, subject to AlphaFold3 Output Terms of Use

Interaction:
Color scheme:
Confidence
Antibodies
Interactor
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PAE plot
Number of interactions: 26
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
CANX130824238124
CDK91714125190
DAD15681919
DNAJB124012114
EMC112130150
EMC2179491820
FKBP8213366460
HSP90B18579167
KRTCAP2304260
MAGT1111251015
MLEC455150
PGRMC1211852834
PIAS18386640
RPN13310135653
RPN233399602
SEC61B5131721600
SSR19326260
SSR3417220
SSR44014320
STING111222806
STT3A681970
STT3B15528543
TUSC330650
UFL111335120
VAPA74401141400
VAPB453380790
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 6 View all protein interaction data in IntAct
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
DAD15681919
MLEC455150
OSTC121120
PGRMC1211852834
RPN13310135653
STING111222806
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 54
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
CALR3105006
CANX130824238124
CDK91714125190
CLEC4E5350043
CLN3031900
CTSB356501
CTSL124007
CTSS007500
DAD15681919
DDR2562600
DNAJB124012114
DNAJC3082313038
DPP40613700
EMC112130150
EMC2179491820
FBXO641385052
FKBP8213366460
HADHB123135
HSP90B18579167
HUWE15520920
INSR161854016
ISG15367302
KRTCAP2304260
LAMP181193471
MAGT1111251015
METTL14113100
MLEC455150
PGRMC1211852834
PHB12713010
PIAS18386640
PRKN1111140500
RPN13310135653
RPN233399602
SEC61B5131721600
SSR19326260
SSR3417220
SSR44014320
STAU13213371390
STING111222806
STT3A681970
STT3B15528543
TGOLN20310200
TMPRSS11B5057016
TMPRSS2126800
TMPRSS40105900
TRIM13001300
TUSC330650
UFL111335120
UNC93B142461022
VAPA74401141400
VAPB453380790
VDAC191577222
VDAC28216280
VDAC33332120
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 108
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ANKHD123970
ANKRD172012130
APBB1441950
ARFIP26421150
ASPH41131049
ATL34142614
ATP2A3002120
BACH1982476
BCAP31231369304
BUB17101640
BUB1B131237120
CANX130824238124
CCDC4715750550
CCNT1633276
CDK91714125190
CKAP23011140
CTC103230
CYB5A436130
DAD15681919
DMXL1204110
DNAJB124012114
DSG2002171
EIF2AK331667
EMC112130150
EMC2179491820
EMC39310196
EMC4111173218
EMC811214558
EMD167294120
ESYT115563310
FAM241A316616
FKBP8213366460
GIGYF25420110
HACD3112190
HEXIM1965368
HOXB615257
HSP90B18579167
JUP7155420
KAT6A2126150
KAT78929132
KDM3A01430
KRTCAP2304260
LARP74251182733
LAS1L3023250
LIN5200820
LIN54361530
MAGT1111251015
MLEC455150
MYBL2422171
NFXL110360
NHLRC300020
NSG1026231
NUDCD238830
NUP2101211101
OST4233910
OSTC121120
PACRGL02040
PAWR451825
PEX10383217
PGRMC1211852834
PGRMC21255202413
PHF8141650
PIAS18386640
PICALM3224160
PLAGL101450
POR8121195
RAB1A15643403
RAB21208136
RAB2A221546471
RAB7A3011131361
RBM14181258990
RBM2611870
RBM4B2726120
REL121442555
RPN13310135653
RPN233399602
RRP11213115
SCD1362131
SEC23A102519111
SEC23B5121583
SEC24B318100
SEC61B5131721600
SIX147641
SPCS32431320
SPTLC1237260
SRPRB71202815
SSR19326260
SSR3417220
SSR44014320
STAU26215180
STT3A681970
STT3B15528543
SUPT6H5024170
TMED94581313
TMEM33111390
TMEM432139926
TMPO9671181
TMX1410141310
TNRC6C13121960
TUSC330650
UFL111335120
VAPA74401141400
VAPB453380790
VRK23813130
WDR720480
YTHDF3222540
ZC3H13001131
ZC3HAV110565776
Show allShow less
DDOST has no defined protein interactions in BioPlex.
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

Gene DDOST is associated with 1 reactions in 1 different subsystems, and present in the compartments: Endoplasmic reticulum. Provided by metabolicatlas.org
Pathway / Subsystem Subsystem-associated compartments # proteins # metabolites # reactions for
this protein
N-glycan metabolism Golgi apparatus, Endoplasmic reticulum, Lysosome, Extracellular, Cytosol 69 94 1
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.

Splice variant SwissProt TrEMBL Protein class Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
DDOST-201 P39656
Metabolic proteins
Transporters
Predicted membrane proteins
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Essential proteins
Protein evidence (Ezkurdia et al 2014)
Show all
456 aa
50.8 kDa
Yes 1
DDOST-202 U3KQ84
Metabolic proteins
Predicted intracellular proteins
Human disease related genes
Essential proteins
Protein evidence (Ezkurdia et al 2014)
Show all
154 aa
17.1 kDa
Yes 0
DDOST-205 A0A0C4DGS1
Metabolic proteins
Predicted membrane proteins
Human disease related genes
Essential proteins
Protein evidence (Ezkurdia et al 2014)
Show all
439 aa
48.8 kDa
Yes 1

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