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FKBP8
HPA
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ipTM
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  • SUMMARY

  • TISSUE

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  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • FKBP8
INTERACTION INTERACTION METABOLIC PATHWAYS Show tissue menu
ISOLATED
Protein interactions
Protein interactions
Methods
Human metabolism
Metabolic proteins
Methods
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

FKBP8
Synonyms FKBP38, FKBPr38
Gene descriptioni

Full gene name according to HGNC.

FKBP prolyl isomerase 8
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Read more
Cancer-related genes
Enzymes
Metabolic proteins
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.
  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)

HUMAN PROTEIN ATLAS INFORMATIONi

Summary of RNA expression analysis and annotation data generated within the Human Protein Atlas project.

Single cell type
expression clusteri

The RNA data was used to cluster genes according to their expression across single cell types. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Elongating spermatids - Sperm cell metabolism & fertilization (mainly)
Single cell type specificityi

The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected.

Cell type enhanced (Esophageal apical cells, Late spermatids, Platelets)
Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Brain - Neuronal signaling (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Low tissue specificity
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Mitochondria In addition localized to the Endoplasmic reticulum, Cytosol
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.
Not available
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband p13.11
Chromosome location (bp) 18531751 - 18544077
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

12
Ensembl ENSG00000105701 (version 109)
Entrez gene 23770
HGNC HGNC:3724
UniProt Q14318
GeneCards FKBP8
ASSAYSi

Links to data of the different assays available in the Structure & Interaction resource of the Human Protein Atlas. Click on the miniature images to directly get to the respective section.

Interaction Metabolic
INTERACTIONi

In the Interaction part of this page network plots showing the gene's first-level interaction partners according to four different datasets are displayed, including a consensus network plot showing only interactions present in at least two of the datasets. By clicking on nodes the network can be expanded. In the network plots the nodes represent genes and edge color represent the number of datasets the interaction belongs to. In-house generated AlphaFold 3 predicted 3D structures for interactions in the consensus network are displayed by clicking on the blue symbols on the edges.

The highlight bar in the top of the plot can be used to color the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass. For genes categorised as single cell type or group specific the option to highlight interaction partners expressed in the same cell type will also be available in the highlight bar.

Custom highlighting of nodes is possible using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Interactions included are direct interaction and physical associations with high and medium confidence from IntAct, physical multivalidated interactions from BioGRID, interactions with>75% probability from BioPlex and significant physical interactions from OpenCell.

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Fields »
e.g. Brain enriched, Localized to mitochondria, Brain - Neuronal signaling

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


Consensus
IntAct
BioGrid
OpenCell
BioPlex
Highlight:
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Subcell location
Predicted location
Cell type specificity
Protein class

Non-commercial use only, subject to AlphaFold3 Output Terms of Use

Interaction:
Color scheme:
Confidence
Antibodies
Interactor
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PAE plot
Number of interactions: 21
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
BCL218255500
CACYBP453160
DDOST266541080
DNAJB6131331250
EGLN1542010
ERBB2325012000
GNB12213523018
HSP90AA15157369230
MAGT1111251015
PDCL10513920
PSMC4431772590
PTGES3358616631
RPN13310135653
RPN233399602
SEC61B5131721600
STIP1132192166
STT3B15528543
SUGT15341100
TMX1410141310
TOMM206120811
VAPA74401141400
Show allShow less
Highlight:
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Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 33 View all protein interaction data in IntAct
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ARL13B21091312
BCL218255500
CD79A01444018
CIDEB059003
CXCR2011200
CYB561049000
CYBRD1019102
EBP0159311
EGFR18727545806
EGLN1542010
ELOVL4079000
ERBB2325012000
ERGIC371871100
FAM174A1312098
HSP90AA15157369230
HSP90AB1651461872219
JAGN11102430
MFSD14B061000
PEX12231300
PLN344600
RETREG3109113035
SCN3B3944027
SLC10A60124000
SLC35A504311
SLC35B1213240
TMEM14B1193100
TMEM254035000
TMEM432139926
TMEM45B031000
TMEM80053000
TMX1410141310
ZFPL135414011
ZFYVE27123210
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 66
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
AKAP1715837
ANKMY202505
ATP6AP21611331972
BCAP31231369304
BCL218255500
C9orf724112700
CACYBP453160
CALM1442117710
CCDC4715750550
CDK20121000
CFTR3410323600
CKAP492651225
CLCN103400
CUL3404577120
DDOST266541080
DNAJB2021300
DNAJB6131331250
DNAJC160014126
DNAJC25001100
EGLN1542010
EMC112130150
EMD167294120
ERBB2325012000
ESYT115563310
ESYT24236120
GNB12213523018
HSP90AA15157369230
HSPBP16618725
KCNH2001100
LMAN1343354
LRRC5951490130
MAGT1111251015
MAVS16257202
MTCH2017505
MTOR2121781317
NUP155234650
PDCL10513920
PDZD83024322
PEX14471850
PRKACA254266250
PRKN1111140500
PSEN111183220
PSMA13714578240
PSMC13624733314
PSMC4431772590
PSMC539311211925
PSMD24131984013
PTGES3358616631
RHEB1111705
RPN13310135653
RPN233399602
SEC61B5131721600
SEC635041518
SSR19326260
ST7112310
STIM162129413
STIP1132192166
STT3B15528543
SUGT15341100
TEX2301530
TMX1410141310
TOMM206120811
TOMM223531121
UFL111335120
USP19102240
VAPA74401141400
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 46
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ARMCX512139
CACYBP453160
CANX130824238124
CAPZB10061336660
CDC37651271721928
CFAP29801091
DAD15681919
DDOST266541080
DNAJB6131331250
FKBP549169315219
GNB12213523018
GNB5231220
GNG5377910
HPS301120
HSP90AA15157369230
HSP90AB1651461872219
KRTCAP2304260
MAGT1111251015
NUDC6143244
OST4233910
OSTC121120
PDCL10513920
PLEKHH100020
POR8121195
PRKDC1113143171
PSMC4431772590
PTGES3358616631
RPAP3201149220
RPN13310135653
RPN233399602
RUVBL2671114210333
SEC61B5131721600
SEM1141233500
SKIC3318910
STIP1132192166
STT3A681970
STT3B15528543
SUGT15341100
TOMM206120811
TOMM40102381126
TOMM510140
TOP2A204771340
VAPA74401141400
VDAC191577222
VDAC28216280
VDAC33332120
Show allShow less
FKBP8 has no defined protein interactions in BioPlex.
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

Gene FKBP8 is associated with 1 reactions in 1 different subsystems, and present in the compartments: Cytosol. Provided by metabolicatlas.org
Pathway / Subsystem Subsystem-associated compartments # proteins # metabolites # reactions for
this protein
Isolated Cytosol, Mitochondria, Peroxisome, Endoplasmic reticulum, Extracellular, Nucleus, Golgi apparatus 524 320 1
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.

Splice variant SwissProt TrEMBL Protein class Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
FKBP8-201 Q14318
A0A024R7P2
Enzymes
Metabolic proteins
Predicted membrane proteins
Plasma proteins
Cancer-related genes
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
Show all
412 aa
44.6 kDa
No 1
FKBP8-202 A0A0A0MTJ1
Metabolic proteins
Predicted membrane proteins
Protein evidence (Ezkurdia et al 2014)
249 aa
27.1 kDa
No 1
FKBP8-203 M0R1S6
Metabolic proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
167 aa
17.8 kDa
No 0
FKBP8-204 U3KQ64
Metabolic proteins
Predicted membrane proteins
Protein evidence (Ezkurdia et al 2014)
182 aa
19.9 kDa
No 1
FKBP8-206 Q14318
A0A024R7P2
Enzymes
Metabolic proteins
Predicted membrane proteins
Plasma proteins
Cancer-related genes
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
Show all
412 aa
44.6 kDa
No 1
FKBP8-207 M0R1Q0
Metabolic proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
163 aa
17.4 kDa
No 0
FKBP8-208 M0R2K9
Metabolic proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
257 aa
27.5 kDa
No 0
FKBP8-209 Q14318
Enzymes
Metabolic proteins
Predicted membrane proteins
Plasma proteins
Cancer-related genes
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
Show all
413 aa
44.6 kDa
No 1
FKBP8-210 M0R2Q6
Metabolic proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
204 aa
21.8 kDa
No 0
FKBP8-212 U3KQI1
Metabolic proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
103 aa
11 kDa
No 0
FKBP8-213 Q14318
Enzymes
Metabolic proteins
Predicted membrane proteins
Plasma proteins
Cancer-related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
413 aa
44.6 kDa
No 1
FKBP8-214 V9GZ05
Metabolic proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
23 aa
2.3 kDa
No 0
Show allShow less

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