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BCAP31
HPA
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Brain region
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ipTM
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SUBCELL

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  • BLOOD

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  • STRUCTURE

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  • BCAP31
INTERACTION INTERACTION METABOLIC PATHWAYS Show tissue menu
BILE ACID BIOSYNTHESIS TRANSPORT REACTIONS
Protein interactions
Protein interactions
Methods
Human metabolism
Metabolic proteins
Methods
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

BCAP31
Synonyms 6C6-Ag, BAP31, CDM, DXS1357E
Gene descriptioni

Full gene name according to HGNC.

B cell receptor associated protein 31
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Read more
Disease related genes
Human disease related genes
Metabolic proteins
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.
  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)

HUMAN PROTEIN ATLAS INFORMATIONi

Summary of RNA expression analysis and annotation data generated within the Human Protein Atlas project.

Single cell type
expression clusteri

The RNA data was used to cluster genes according to their expression across single cell types. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Cytotrophoblasts - Basic cellular functions (mainly)
Single cell type specificityi

The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected.

Cell type enhanced (Cytotrophoblasts, Esophageal apical cells, Extravillous trophoblasts, Migrating cytotrophoblasts, Syncytiotrophoblasts)
Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Choroid plexus - Transmembrane transport (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Low tissue specificity
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Endoplasmic reticulum
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.
Not available
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband q28
Chromosome location (bp) 153700492 - 153724565
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000185825 (version 109)
Entrez gene 10134
HGNC HGNC:16695
UniProt P51572
GeneCards BCAP31
ASSAYSi

Links to data of the different assays available in the Structure & Interaction resource of the Human Protein Atlas. Click on the miniature images to directly get to the respective section.

Interaction Metabolic
INTERACTIONi

In the Interaction part of this page network plots showing the gene's first-level interaction partners according to four different datasets are displayed, including a consensus network plot showing only interactions present in at least two of the datasets. By clicking on nodes the network can be expanded. In the network plots the nodes represent genes and edge color represent the number of datasets the interaction belongs to. In-house generated AlphaFold 3 predicted 3D structures for interactions in the consensus network are displayed by clicking on the blue symbols on the edges.

The highlight bar in the top of the plot can be used to color the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass. For genes categorised as single cell type or group specific the option to highlight interaction partners expressed in the same cell type will also be available in the highlight bar.

Custom highlighting of nodes is possible using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Interactions included are direct interaction and physical associations with high and medium confidence from IntAct, physical multivalidated interactions from BioGRID, interactions with>75% probability from BioPlex and significant physical interactions from OpenCell.

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Choroid plexus - Transmembrane transport

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


Consensus
IntAct
BioGrid
OpenCell
BioPlex
Highlight:
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Subcell location
Predicted location
Cell type specificity
Protein class

Non-commercial use only, subject to AlphaFold3 Output Terms of Use

Interaction:
Color scheme:
Confidence
Antibodies
Interactor
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PAE plot
Number of interactions: 23
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
APP4431314110
ARL6IP1106011160
BCAP2912332
BCL218255500
CASP813214900
CYB5A436130
DERL15254300
ESYT115563310
FIS1322906
GOLT1B485161
HACD228200
NSDHL337204
PGRMC1211852834
PGRMC21255202413
POR8121195
RTN4231345660
SACM1L926152023
SEC61B5131721600
SSR19326260
TMX331550
TRAM112601
VAPA74401141400
VAPB453380790
Show allShow less
Highlight:
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Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 13 View all protein interaction data in IntAct
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
APP4431314110
BCAP2912332
BCL218255500
CASP813214900
CFTR3410323600
DERL15254300
FIS1322906
HACD228200
HTT366665600
KLK601000012
SEC61B5131721600
TIMMDC165311041
TRAM112601
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 69
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ACTG13015751160
AGR236422702
AP3D1001810
APP4431314110
ARL6IP1106011160
BCAP2912332
BCL218255500
BCL2L111254700
CALR3105006
CANX130824238124
CASP813214900
CDC423033160151
COX4I12510521
CYB5A436130
DERL15254300
DNAJC1192300
DNAJC160014126
EGFR18727545806
EMC112130150
ENO1567851
ESYT115563310
FIS1322906
FKBP8213366460
GOLT1B485161
H2BC54244254
HACD228200
HLA-A244603
HSP90AA15157369230
HSPA538322682586
ITGAM034102
KRAS115414160
KTN1162500
LAMP2312140
LMAN1343354
MMGT1135043160
MYH10223750
NSDHL337204
PDZD83024322
PGRMC1211852834
PGRMC21255202413
PHB12713010
PLD3032300
POR8121195
PTPN1132777118
RAB11A21112054713
RAB7A3011131361
REEP5166261147
RNF5144434010
RPA171042011
RPA2111537620
RPA35631411
RTN4231345660
SACM1L926152023
SEC61B5131721600
SEC635041518
SLC12A2111920
SSR19326260
STX177813018
SYNE2231800
TEX2301530
TMX331550
TRAM112601
UBL4A6102746
VAMP32546386223
VAPA74401141400
VAPB453380790
VCP5756348435
VDAC191577222
VDAC28216280
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 30
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ARF43322112
ARL6IP1106011160
ATL34142614
BCAP2912332
COPA14240780
COPB2131291224
COPE193289213
COPG1164271911
COPG210018247
COPZ111015377
CYB5A436130
DDOST266541080
ESYT115563310
GOLT1B485161
HACD3112190
MICAL218151
NSDHL337204
OSBP638177
PGRMC1211852834
PGRMC21255202413
POR8121195
RTN4231345660
SACM1L926152023
SCD1362131
SSR19326260
SSR44014320
TMX331550
VAPA74401141400
VAPB453380790
YIPF5325390
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 4
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
BCAP2912332
C1orf210000013
CALCOCO2211185905
SCN3B3944027
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

Gene BCAP31 is associated with 6 reactions in 2 different subsystems, and present in the compartments: Cytosol, Peroxisome. Provided by metabolicatlas.org
Pathway / Subsystem Subsystem-associated compartments # proteins # metabolites # reactions for
this protein
Transport reactions Cytosol, Extracellular, Lysosome, Peroxisome, Mitochondria, Golgi apparatus, Endoplasmic reticulum, Nucleus, Inner mitochondria 563 1599 5
Bile acid biosynthesis Peroxisome, Endoplasmic reticulum, Cytosol, Mitochondria, Extracellular 94 171 1
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.

Splice variant SwissProt TrEMBL Protein class Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
BCAP31-201 P51572
Metabolic proteins
Transporters
Predicted membrane proteins
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
246 aa
28 kDa
No 3
BCAP31-202 C9JSP1
Metabolic proteins
Predicted membrane proteins
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
182 aa
20.7 kDa
No 3
BCAP31-203 C9JMD7
Metabolic proteins
Predicted membrane proteins
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
178 aa
20.2 kDa
No 3
BCAP31-204 C9JQ75
Metabolic proteins
Predicted membrane proteins
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
187 aa
21.2 kDa
No 3
BCAP31-205 C9JM14
Metabolic proteins
Predicted membrane proteins
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
138 aa
16 kDa
No 3
BCAP31-206 C9J0M4
Metabolic proteins
Predicted membrane proteins
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
188 aa
21.3 kDa
No 3
BCAP31-207 P51572
Metabolic proteins
Transporters
Predicted membrane proteins
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
313 aa
34.8 kDa
No 3
BCAP31-210 A0A2R8Y5M6
Metabolic proteins
Predicted membrane proteins
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
211 aa
24.1 kDa
No 3
BCAP31-213 P51572
Metabolic proteins
Transporters
Predicted membrane proteins
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Ezkurdia et al 2014)
Show all
246 aa
28 kDa
No 3
BCAP31-214 P51572
Metabolic proteins
Transporters
Predicted membrane proteins
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
246 aa
28 kDa
No 3
Show allShow less

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