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FKBP5
HPA
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  • SUMMARY

  • TISSUE

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  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • FKBP5
INTERACTION INTERACTION METABOLIC PATHWAYS Show tissue menu
ISOLATED
Protein interactions
Protein interactions
Methods
Human metabolism
Metabolic proteins
Methods
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

FKBP5
Synonyms FKBP51, FKBP54, P54, PPIase, Ptg-10
Gene descriptioni

Full gene name according to HGNC.

FKBP prolyl isomerase 5
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Read more
Cancer-related genes
Enzymes
Human disease related genes
Metabolic proteins
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.
  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)

HUMAN PROTEIN ATLAS INFORMATIONi

Summary of RNA expression analysis and annotation data generated within the Human Protein Atlas project.

Single cell type
expression clusteri

The RNA data was used to cluster genes according to their expression across single cell types. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Neutrophils - Innate immunity signal integration (mainly)
Single cell type specificityi

The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected.

Cell type enhanced (Innate lymphoid cells, Monocyte progenitors, Neutrophils, Podocytes, Proximal tubule cells, Thymic myoid cells, Thymocytes)
Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Non-specific - Basic cellular processes (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Tissue enhanced (Skeletal muscle, Tongue)
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Nucleoplasm In addition localized to the Nucleoli fibrillar center, Cytosol
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.
Not available
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband p21.31
Chromosome location (bp) 35573585 - 35728583
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000096060 (version 109)
Entrez gene 2289
HGNC HGNC:3721
UniProt Q13451
GeneCards FKBP5
ASSAYSi

Links to data of the different assays available in the Structure & Interaction resource of the Human Protein Atlas. Click on the miniature images to directly get to the respective section.

Interaction Metabolic
INTERACTIONi

In the Interaction part of this page network plots showing the gene's first-level interaction partners according to four different datasets are displayed, including a consensus network plot showing only interactions present in at least two of the datasets. By clicking on nodes the network can be expanded. In the network plots the nodes represent genes and edge color represent the number of datasets the interaction belongs to. In-house generated AlphaFold 3 predicted 3D structures for interactions in the consensus network are displayed by clicking on the blue symbols on the edges.

The highlight bar in the top of the plot can be used to color the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass. For genes categorised as single cell type or group specific the option to highlight interaction partners expressed in the same cell type will also be available in the highlight bar.

Custom highlighting of nodes is possible using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Interactions included are direct interaction and physical associations with high and medium confidence from IntAct, physical multivalidated interactions from BioGRID, interactions with>75% probability from BioPlex and significant physical interactions from OpenCell.

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Non-specific - Basic cellular processes

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


Consensus
IntAct
BioGrid
OpenCell
BioPlex
Highlight:
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Subcell location
Predicted location
Cell type specificity
Protein class

Non-commercial use only, subject to AlphaFold3 Output Terms of Use

Interaction:
Color scheme:
Confidence
Antibodies
Interactor
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PAE plot
Number of interactions: 49
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
AGO19102454
AGO2152877100
AGO3771144
AHSA15438200
ALDH1B110990
CACYBP453160
CAMKK220840
CDC37651271721928
CDK1523200
CDK4192748417
CDK91714125190
CHUK131967714
CILK134800
DNAJB6131331250
DNAJC117422110
EIF2AK112310
GLMN5321113
HSP90AA15157369230
HSP90AB1651461872219
HSPA8654545729101
IKBKB15238166
IKBKG44629850
IRAK112125310
MAP3K21831391
MCM36194353
MCM4127441215
MCMBP8121710
MOS446603
NEK4461820
NR3C141010431
NUDC6143244
NUDCD381619115
PRKAA173340100
PSKH243403
PTGES3358616631
PYGB46818
PYGL22652
RADX33531
RAF13242196140
SRMS325011
STIP1132192166
STK1114173437
SUGT15341100
TRAP12133151
TRMT633535
TSSK6431206
TTC4461621
ULK322360
USP49111500
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 16 View all protein interaction data in IntAct
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
CDK1523200
CDK91714125190
CHUK131967714
CILK134800
EGFR18727545806
HSP90AA15157369230
HSP90AB1651461872219
KSR244604
MCM71526721124
MOS446603
PYGB46818
SGK1061700
STIP1132192166
STK1114173437
ULK322360
USP49111500
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 93
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
AGO19102454
AGO2152877100
AGO3771144
AHSA15438200
AKT15314319724
ALDH1B110990
ANKMY202505
AR344225400
ARAF191665114
AURKB132097318
BRAF171134301
CACYBP453160
CAMK2G121720
CAMKK220840
CDC37651271721928
CDC37L1341703
CDK11A012100
CDK11B332220
CDK13221420
CDK1523200
CDK4192748417
CDK716648179
CDK91714125190
CDKL110203
CHORDC1331500
CHUK131967714
CILK134800
CLK314344550
CSNK1A1251861230
DNAJB6131331250
DNAJC117422110
EGLN1542010
EIF2AK112310
EPHB600500
ESR1345947900
FBXL6114700
GLMN5321113
HGH111300
HSF4001300
HSP90AA15157369230
HSP90AB1651461872219
HSPA8654545729101
IKBKB15238166
IKBKG44629850
ILK12185646
IRAK112125310
IRS4246700
KIFBP7612024
LIMK223910
LRRC4012510
MAP3K21831391
MAP3K711137644
MAPT111918800
MCM36194353
MCM4127441215
MCMBP8121710
MOS446603
NEK4461820
NR3C141010431
NR3C213700
NTRK15613400
NUDC6143244
NUDCD381619115
PDCD216338
PGR232500
PHLPP1322102
PINK1161664099
PNPLA211807
PRKAA173340100
PRKN1111140500
PRKX042021
PSKH243403
PTEN111813000
PTGES3358616631
PYGB46818
PYGL22652
RADX33531
RAF13242196140
RPS6KB2112602
SGK211400
SRMS325011
STIP1132192166
STK1114173437
STK4012900
SUGT15341100
TEDC112203
TRAP12133151
TRMT633535
TSSK6431206
TTC4461621
TUBA1A129900121
ULK322360
USP49111500
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 152
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ABCE18124420
AGO19102454
AGO2152877100
AGO3771144
AHSA15438200
ALDH1B110990
ANAPC193331210
ANAPC510126921
ARMCX512139
ASDURF000130
ATR264410
BUB17101640
C5orf3400120
CACYBP453160
CAD223992
CAMKK220840
CAPZB10061336660
CDC37651271721928
CDK1121913160
CDK5RAP100120
CDK91714125190
CFAP29801091
CHD7221230
CHUK131967714
COX5A171690
CTC103230
DDX1101010
DDX185028626
DDX5900010
DEPDC100020
DHX3311622
DLAT332141
DNA240928
DNAAF1016531107
DNAJB6131331250
DNAJC117422110
DNAJC2100470
DRG1209271850
EFTUD254151814630
EIF2AK112310
ELP1662115
ELP211710
EML441978
ESPL121620
FAM120A9239150
FANCI331910
FASN263994
FKBP8213366460
G6PD111360
GEMIN5104302111
GLMN5321113
HACD3112190
HAUS5221310
HCFC1171873147
HPS301120
HSP90AA15157369230
HSP90AB1651461872219
HSPA1L71023110
HSPA8654545729101
IARS2002462
IKBKB15238166
IKBKG44629850
IRAK112125310
KDM4B3014113
LATS18138010
LGALS141120549
LIMS210120
LLGL1401948
MAP3K21831391
MAPK7372720
MCM240481081021
MCM36194353
MCM4127441215
MCM61617421115
MCM71526721124
MCM833550
MCMBP8121710
MELK61895
MOV1010978521
MTBP00670
MTO100010
NANS00162
NAT109240235
NCAPG211420
NEIL310722
NEK4461820
NMT1114310
NOC2L3221132
NR3C141010431
NSD274351417
NSUN23124112
NSUN500220
NUDC6143244
NUDCD238830
NUDCD381619115
NYNRIN10120
PDCD111119335
PDHB233050
PIK3C2A7014199
PKN23212519
PLA2G4A001190
PLD2041710
PLEKHH100020
POLD191131218
POLE6416314
POLR1B10224130
POLR2B49381878
POLR2E68428810911
POLR3B251333611
PPP2R1A51351231547
PPP2R1B109271221
PPP5C13162661
PPWD1001102
PRKAA173340100
PRKDC1113143171
PSME3343572430
PTDSS2121841
PTGES3358616631
PTOV1001119
PYGB46818
PYGL22652
RAD54B03710
RADX33531
RAF13242196140
RCL112672
RPAP3201149220
RPF23220239
RSU132425
RUVBL2671114210333
SACS00021
SHPRH121130
SKIC3318910
SMARCAL111413
SMG811320
STIP1132192166
STX121933364118
SUGT15341100
TOMM70001850
TOP2A204771340
TRAP12133151
TRMT2A15420
TRMT633535
TTC2691210218
TTC4461621
TTF23212321
TTI16514323
UQCRB2141063
URB200427
URI1191139180
WDR62221714
WRAP73348112
YTHDC22114735
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 19
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
CDC37651271721928
CDK4192748417
CHUK131967714
CLIC3122208
CMA1000016
EEF1AKMT31510169
FER13702
GGH2141106
GLMN5321113
IKBKB15238166
MAP2K2199281056
MOS446603
PIPOX01003
PSKH243403
PTGES3358616631
RPS6KA4517420
SRMS325011
STK1114173437
TSSK6431206
Show allShow less
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

Gene FKBP5 is associated with 1 reactions in 1 different subsystems, and present in the compartments: Cytosol. Provided by metabolicatlas.org
Pathway / Subsystem Subsystem-associated compartments # proteins # metabolites # reactions for
this protein
Isolated Cytosol, Mitochondria, Peroxisome, Endoplasmic reticulum, Extracellular, Nucleus, Golgi apparatus 524 320 1
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.

Splice variant SwissProt TrEMBL Protein class Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
FKBP5-201 Q13451
Enzymes
Metabolic proteins
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
457 aa
51.2 kDa
No 0
FKBP5-202 Q13451
Enzymes
Metabolic proteins
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
457 aa
51.2 kDa
No 0
FKBP5-203 Q13451
Enzymes
Metabolic proteins
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
457 aa
51.2 kDa
No 0
FKBP5-204 Q13451
Enzymes
Metabolic proteins
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
268 aa
30 kDa
No 0

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