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CBL
HPA
RESOURCES
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Annotation
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Category
Tau score
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Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
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Reliability
Tissue
Cell type
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Category
Tau score
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Tau score
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Category
Tau score
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Tau score
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Tau score
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Interacting gene (ensg_id)
Type
Number of interactions
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ipTM
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Antibodies
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Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CBL
INTERACTION INTERACTION METABOLIC PATHWAYS Show tissue menu
ISOLATED
Protein interactions
Protein interactions
Methods
Human metabolism
Metabolic proteins
Methods
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CBL
Synonyms c-Cbl, CBL2, RNF55
Gene descriptioni

Full gene name according to HGNC.

Cbl proto-oncogene
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Read more
Cancer-related genes
Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.
  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)

HUMAN PROTEIN ATLAS INFORMATIONi

Summary of RNA expression analysis and annotation data generated within the Human Protein Atlas project.

Single cell type
expression clusteri

The RNA data was used to cluster genes according to their expression across single cell types. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Neutrophils - Innate immunity signal integration (mainly)
Single cell type specificityi

The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected.

Cell type enhanced (Neutrophil progenitors, Neutrophils)
Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Lymphoid tissue - Adaptive immune response (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Low tissue specificity
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Cytosol In addition localized to the Mitotic spindle, End piece
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.
Not available
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q23.3
Chromosome location (bp) 119206298 - 119313926
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000110395 (version 109)
Entrez gene 867
HGNC HGNC:1541
UniProt P22681
GeneCards CBL
ASSAYSi

Links to data of the different assays available in the Structure & Interaction resource of the Human Protein Atlas. Click on the miniature images to directly get to the respective section.

Interaction Metabolic
INTERACTIONi

In the Interaction part of this page network plots showing the gene's first-level interaction partners according to four different datasets are displayed, including a consensus network plot showing only interactions present in at least two of the datasets. By clicking on nodes the network can be expanded. In the network plots the nodes represent genes and edge color represent the number of datasets the interaction belongs to. In-house generated AlphaFold 3 predicted 3D structures for interactions in the consensus network are displayed by clicking on the blue symbols on the edges.

The highlight bar in the top of the plot can be used to color the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass. For genes categorised as single cell type or group specific the option to highlight interaction partners expressed in the same cell type will also be available in the highlight bar.

Custom highlighting of nodes is possible using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Interactions included are direct interaction and physical associations with high and medium confidence from IntAct, physical multivalidated interactions from BioGRID, interactions with>75% probability from BioPlex and significant physical interactions from OpenCell.

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Lymphoid tissue - Adaptive immune response

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


Consensus
IntAct
BioGrid
OpenCell
BioPlex
Highlight:
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Subcell location
Predicted location
Cell type specificity
Protein class

Non-commercial use only, subject to AlphaFold3 Output Terms of Use

Interaction:
Color scheme:
Confidence
Antibodies
Interactor
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PAE plot
Number of interactions: 31
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
APPL1153433206
ARHGEF7141527100
CD2AP10113065
CRK31547300
CRKL14245010
EGFR18727545806
EPS851412010
FYN21516900
GRB28216620635
ITSN115143540
LCK16294000
LYN10297210
MET6175400
NCK1233261164
PIK3R1274411270
PIK3R213223694
PIK3R327724113
RET464300
SFN5912610210
SH2B211701
SH3KBP121357010
SHC114188600
SPRY28511605
SRC295713400
STAT5A782805
SYK8164000
UBE2D2334113004
YWHAE23512338332412
YWHAG25427143322213
YWHAZ2221643483248
ZAP70552100
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 36 View all protein interaction data in IntAct
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
APPL1153433206
ARHGEF7141527100
ATXN1532727420
CD2AP10113065
CRK31547300
CRKL14245010
EGFR18727545806
EPS851412010
F2RL1587062
FYN21516900
GRB28216620635
HTT366665600
ITSN115143540
LCK16294000
LRIG135600
LYN10297210
MET6175400
NCK1233261164
PIK3R1274411270
PIK3R213223694
PIK3R327724113
RET464300
SFN5912610210
SH2B211701
SH3GL212171711
SH3KBP121357010
SHC114188600
SPRY28511605
SPRY4231905
SRC295713400
STAT3255910700
STAT5A782805
SYK8164000
UBE2D2334113004
YWHAE23512338332412
ZAP70552100
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 131
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
ABL126349570
ACTB772719511134
APPL1153433206
ARHGEF7141527100
AXL242000
BAG1683700
BCR444130
BLNK331400
BTK6141704
CAPZA19942128
CBLB6262500
CD2AP10113065
CD3800300
CD500100
CDC423033160151
CFTR3410323600
CRK31547300
CRKL14245010
CSF1R231400
CSK6103030
CTNNB147852851313
EGFR18727545806
EPHA2101110205
EPHB113600
EPS851412010
ERBB2325012000
FLOT14933016
FLT1361200
FLT303900
FRS2112100
FYN21516900
GRAP210411805
GRB28216620635
H4C1325635605
HCK5172500
HSPA538322682586
IGF1R162373115
INPPL154193112
IRS1694300
ITSN115143540
JAK2353600
KDR7152200
KIT772800
KRT12331300
LAT561800
LCK16294000
LCP27161600
LYN10297210
MAPK1424276640
MAPK810126540
MET6175400
MST1R03900
MYH91013105262
MYO1C3234110
NCK1233261164
NCK22111438313
NECTIN114500
NLRC412600
NOTCH171170019
NRAS3614200
NTRK15613400
OSTF149743
PDGFRA452700
PEAK300600
PIK3CA6112431
PIK3CB371102
PIK3R1274411270
PIK3R213223694
PIK3R327724113
PLCG111274700
PLK13551218510
PRKCA25836025
PRKCQ271200
PRKN1111140500
PRNP91729400
PRPSAP222574
PTEN111813000
PTK219256510
PTK2B153100
PTPN1119308200
PXN13116140
RAPGEF155800
RET464300
SFN5912610210
SH2B211701
SH3BP247900
SH3KBP121357010
SHC114188600
SLA12600
SLA212300
SMAD7574600
SORBS1241600
SORBS24121600
SOS111162511
SP717500
SPRY1359400
SPRY28511605
SQSTM1324031220
SRC295713400
STAP2310600
STAT5A782805
SYK8164000
TGFBR235424013
TGM2251701
TNFRSF10B121700
TNS4111309
TRAF6316015503
TSG101215061156
TUBB221889082
UBASH3A071400
UBASH3B4281603
UBC355946340
UBE2D1344012300
UBE2D2334113004
UBE2D3232612100
UBE2E1784706
UBE2E314253602
UBE2L311115810
UBE2M676460
UBE2N17266620
VAV1673700
VAV2351200
VIM36881091425
XRCC51418135132
YWHAB183933372450
YWHAE23512338332412
YWHAG25427143322213
YWHAH130363951446
YWHAQ9061318796
YWHAZ2221643483248
ZAP70552100
Show allShow less
Highlight:
Off
Subcell location
Predicted location
Cell type specificity
Protein class

Number of interactions: 3
Interaction# Consensus# IntAct# BioGrid# OpenCell# BioPlex
YWHAE23512338332412
YWHAG25427143322213
YWHAZ2221643483248
CBL has no defined protein interactions in BioPlex.
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

Gene CBL is associated with 1 reactions in 1 different subsystems, and present in the compartments: Cytosol. Provided by metabolicatlas.org
Pathway / Subsystem Subsystem-associated compartments # proteins # metabolites # reactions for
this protein
Isolated Cytosol, Mitochondria, Peroxisome, Endoplasmic reticulum, Extracellular, Nucleus, Golgi apparatus 524 320 1
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.

Splice variant SwissProt TrEMBL Protein class Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CBL-201 P22681
Enzymes
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Disease related genes
Potential drug targets
Human disease related genes
Mapped to neXtProt
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
906 aa
99.6 kDa
No 0
CBL-202 A0A0U1RRJ5
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
89 aa
9.5 kDa
No 0
CBL-203 A0A0U1RQX8
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
882 aa
96.9 kDa
No 0
CBL-204 A0A0U1RR39
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
862 aa
95.1 kDa
No 0
CBL-205 A0A1B0GW38
Metabolic proteins
Predicted intracellular proteins
Cancer-related genes
Human disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
869 aa
96 kDa
No 0
Show allShow less

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