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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • NNAT
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN67 EYE3 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM8 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD WHITE MATTER
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:143.2 nTPM
GTEx:285.8 nTPM
FANTOM5:1717.7 Scaled Tags Per Million
Macaque:47.5 nTPM
Pig:136.3 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

143.2
Sample id Sample description nTPM
Putamen
nTPM: 143.2
1838 Male, age 80, right hemisphere 269.8
1937 Female, age 91, right hemisphere 195.2
2466 Female, age 79, unknown 185.3
1829 Male, age 74, unknown 141.4
2647 Male, age 75, left hemisphere 73.5
2489 Female, age 72, unknown 71.4
2482 Female, age 94, left hemisphere 66.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

285.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 285.8
Samples: 254

Max nTPM: 1593.3
Min nTPM: 10.0
Std nTPM: 287.9
Median nTPM: 193.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1593.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1452.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1361.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1309.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1213.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1171.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1170.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1025.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 971.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 945.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 909.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 905.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 895.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 864.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 862.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 854.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 849.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 811.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 795.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 757.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 755.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 730.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 722.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 719.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 666.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 653.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 652.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 626.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 620.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 616.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 614.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 607.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 589.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 581.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 577.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 564.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 561.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 534.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 521.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 516.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 510.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 501.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 496.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 492.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 490.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 487.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 484.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 474.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 471.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 467.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 459.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 453.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 453.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 440.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 439.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 437.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 430.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 421.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 413.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 406.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 405.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 405.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 404.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 404.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 404.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 396.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 393.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 389.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 387.7
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 381.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 379.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 376.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 360.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 351.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 344.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 340.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 337.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 330.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 327.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 327.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 323.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 321.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 310.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 309.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 307.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 306.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 304.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 299.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 299.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 292.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 290.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 286.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 283.0
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 280.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 279.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 275.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 274.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 268.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 268.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 261.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 261.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 260.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 250.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 244.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 244.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 243.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 241.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 231.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 230.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 228.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 226.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 225.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 223.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 220.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 213.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 212.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 212.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 211.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 209.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 207.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 205.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 205.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 200.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 198.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 195.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 194.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 193.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 192.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 191.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 184.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 184.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 184.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 176.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 174.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 174.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 173.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 171.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 168.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 166.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 161.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 161.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 159.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 159.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 155.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 153.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 151.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 150.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 149.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 149.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 147.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 147.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 146.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 144.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 141.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 140.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 136.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 134.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 132.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 131.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 129.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 128.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 125.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 125.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 123.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 122.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 122.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 115.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 114.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 111.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 106.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 104.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 104.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 102.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 102.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 101.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 96.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 94.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 94.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 91.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 90.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 89.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 89.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 88.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 86.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 83.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 83.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 83.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 81.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 80.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 80.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 78.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 77.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 77.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 76.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 76.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 74.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 69.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 65.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 61.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 60.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 60.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 59.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 55.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 55.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 55.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 54.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 52.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 51.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 51.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 51.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 47.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 47.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 46.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 46.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 45.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 45.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 44.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 43.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 42.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 41.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 41.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 40.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 37.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 37.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 36.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 36.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 35.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 34.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 33.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 33.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 31.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 31.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 31.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 29.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 29.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 29.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 27.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 26.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 26.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 25.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 25.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 21.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 21.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 20.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 20.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 20.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 16.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 15.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 14.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 14.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 13.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 10.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1717.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1717.7
FF:10176-103C5 60 years, female 1717.7

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.5
Macaque sample Sample description nTPM
Putamen
nTPM: 47.5
Samples: 2

Max nTPM: 47.9
Min nTPM: 47.1
Sample A 47.9
Sample B 47.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.3
Pig sample Sample description nTPM
Putamen
nTPM: 136.3
Samples: 3

Max nTPM: 162.5
Min nTPM: 105.9
Sample B Female 162.5
Sample C Male 105.9
Sample D Male 140.6

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