HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:252.2 nTPM
HPA Brain:228.6 nTPM
GTEx:252.2 nTPM
FANTOM5:465.7 Scaled Tags Per Million
Pig:373.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 228.6
Sample id Sample description nTPM
Hippocampus
nTPM: 151.9
1898 Male, age 80, left hemisphere 229.4
1855 Male, age 76, left hemisphere 221.7
2621 Female, age 67, right hemisphere 199.6
1911 Female, age 85, right hemisphere 121.4
2148 Female, age 91, left hemisphere 76.6
2529 Female, age 94, left hemisphere 62.5
Dentate gyrus
nTPM: 162.4
2010 Male, age 76, both hemispheres 254.3
1927 Female, age 91, both hemispheres 204.7
2246 Female, age 85, both hemispheres 200.8
2531 Female, age 67, both hemispheres 116.0
2530 Female, age 94, left hemisphere 105.9
2528 Male, age 74, both hemispheres 92.5
Entorhinal gyrus
nTPM: 133.9
2613 Female, age 94, left hemisphere 216.5
1938 Female, age 85, left hemisphere 153.2
2764 Male, age 80, right hemisphere 137.3
1787 Male, age 76, left hemisphere 134.0
2686 Male, age 75, right hemisphere 84.4
2117 Female, age 91, right hemisphere 78.0
Hippocampus, CA1
nTPM: 228.6
2749 Male, age 80, left hemisphere 445.5
1873 Female, age 85, both hemispheres 226.6
2082 Female, age 91, right hemisphere 216.2
2045 Male, age 76, both hemispheres 148.0
2527 Male, age 74, both hemispheres 107.0
Hippocampus, CA2
nTPM: 153.7
1892 Male, age 76, both hemispheres 284.7
1963 Male, age 80, left hemisphere 226.3
2249 Male, age 74, both hemispheres 167.7
2113 Female, age 91, right hemisphere 90.7
1940 Female, age 85, left hemisphere 82.6
2437 Female, age 94, left hemisphere 70.2
Hippocampus, CA3
nTPM: 189.3
2137 Male, age 80, left hemisphere 387.9
1867 Male, age 76, both hemispheres 295.9
2861 Female, age 67, both hemispheres 144.2
2436 Male, age 74, both hemispheres 113.9
2620 Female, age 94, left hemisphere 101.8
1891 Female, age 85, both hemispheres 92.2
Parahippocampal cortex
nTPM: 129.4
2018 Male, age 76, both hemispheres 238.2
2245 Female, age 91, both hemispheres 184.4
2250 Female, age 67, right hemisphere 165.4
1933 Female, age 85, both hemispheres 129.6
1850 Male, age 80, both hemispheres 117.8
2693 Female, age 94, both hemispheres 109.3
1990 Female, age 91, right hemisphere 106.6
2532 Female, age 72, left hemisphere 94.2
2692 Male, age 74, both hemispheres 75.5
2622 Female, age 67, right hemisphere 73.1
Perirhinal gyrus
nTPM: 123.8
1847 Female, age 91, left hemisphere 215.7
2848 Male, age 76, right hemisphere 134.5
2521 Female, age 94, right hemisphere 98.6
1794 Male, age 80, right hemisphere 92.5
1841 Female, age 85, right hemisphere 77.9
Subiculum
nTPM: 130.3
1901 Male, age 80, both hemispheres 218.9
2042 Male, age 76, both hemispheres 190.9
1977 Female, age 85, both hemispheres 166.8
2729 Female, age 91, right hemisphere 74.6
2438 Female, age 94, left hemisphere 74.3
2619 Male, age 74, both hemispheres 56.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 252.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 252.2
Samples: 255

Max nTPM: 1015.2
Min nTPM: 6.1
Std nTPM: 197.7
Median nTPM: 205.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1015.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 952.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 890.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 878.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 807.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 794.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 776.8
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 754.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 709.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 695.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 677.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 465.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 465.7
FF:10169-103B7 60 years, female 741.5
FF:10153-102I9 76 years, female 189.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 373.3
Pig sample Sample description nTPM
Subiculum
nTPM: 339.8
Samples: 4

Max nTPM: 452.7
Min nTPM: 190.9
Sample A Female 315.0
Sample B Female 190.9
Sample C Male 400.4
Sample D Male 452.7
Dorsal hippocampus
nTPM: 336.7
Samples: 4

Max nTPM: 426.4
Min nTPM: 256.9
Sample A Female 346.6
Sample B Female 256.9
Sample C Male 426.4
Sample D Male 316.9
Entorhinal cortex
nTPM: 152.2
Samples: 4

Max nTPM: 248.5
Min nTPM: 58.3
Sample A Female 248.5
Sample B Female 130.4
Sample C Male 171.4
Sample D Male 58.3
Ventral hippocampus
nTPM: 373.3
Samples: 4

Max nTPM: 755.0
Min nTPM: 108.8
Sample A Female 409.7
Sample B Female 219.8
Sample C Male 755.0
Sample D Male 108.8

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo