COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
RNA expressioni
Consensus:39.1 nTPM
HPA:33.3 nTPM
GTEx:39.1 nTPM
FANTOM5:68.8 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA065436Antibody HPA070137
Endothelial cells MediumLow
Glandular cells MediumHigh





COLON - HPA RNA-seqi
Average nTPMi 33.3
overview
Male, age 54
Colon sample 67
nTPM: 28.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 29.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 36.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 27.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 28.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 32.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 36.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 34.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 35.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 38.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 37.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 35.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 31.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 39.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 39.1
Samples: 419

Max nTPM: 98.7
Min nTPM: 14.1
Std nTPM: 10.6
Median nTPM: 37.8
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 98.7
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 72.3
GTEX-14E1K-1626-SM-664MO 50-59 years, male 71.3
GTEX-11O72-2526-SM-GJ3PW 40-49 years, male 67.0
GTEX-15RIE-2026-SM-7KFRW 60-69 years, male 66.3
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 65.8
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 63.0
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 61.4
GTEX-1399S-1826-SM-GIN9Y 30-39 years, female 61.0
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 60.0
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 59.8
Show allShow less
Colon - Transverse
Average nTPM: 27.2
Samples: 479

Max nTPM: 62.7
Min nTPM: 13.2
Std nTPM: 8.5
Median nTPM: 25.3
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 62.7
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 59.9
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 56.8
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 56.5
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 54.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 54.1
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 53.1
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 51.9
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 51.6
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 50.2
GTEX-14C5O-2526-SM-5P9I5 60-69 years, male 49.9
Show allShow less

COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 68.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 68.8
FF:10014-101C5 62,83,84 years, mixed 68.8

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo