PSD
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • PSD
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:296.5 nTPM
GTEx:278.8 nTPM
FANTOM5:445.9 Scaled Tags Per Million
Macaque:57.2 nTPM
Pig:172.6 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

296.5
Sample id Sample description nTPM
Putamen
nTPM: 296.5
1937 Female, age 91, right hemisphere 384.9
1838 Male, age 80, right hemisphere 339.0
2647 Male, age 75, left hemisphere 308.5
2489 Female, age 72, unknown 283.4
1829 Male, age 74, unknown 269.4
2466 Female, age 79, unknown 258.9
2482 Female, age 94, left hemisphere 231.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

278.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 278.8
Samples: 254

Max nTPM: 924.0
Min nTPM: 35.0
Std nTPM: 150.4
Median nTPM: 252.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 924.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 802.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 629.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 628.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 616.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 599.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 586.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 584.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 568.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 567.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 563.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 547.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 543.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 541.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 528.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 527.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 523.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 523.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 517.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 517.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 505.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 499.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 499.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 498.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 494.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 489.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 488.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 484.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 480.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 479.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 454.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 452.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 452.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 450.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 449.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 446.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 442.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 440.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 437.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 436.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 434.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 432.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 430.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 430.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 428.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 426.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 425.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 423.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 422.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 421.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 416.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 410.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 410.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 409.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 408.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 405.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 404.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 399.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 397.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 396.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 391.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 391.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 391.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 391.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 380.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 370.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 365.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 362.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 360.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 360.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 359.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 358.7
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 357.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 356.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 354.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 349.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 346.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 345.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 343.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 342.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 341.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 335.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 334.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 333.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 330.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 327.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 326.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 326.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 325.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 324.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 324.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 318.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 318.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 312.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 312.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 311.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 311.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 306.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 306.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 305.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 303.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 303.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 301.3
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 299.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 293.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 291.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 289.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 289.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 286.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 282.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 282.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 282.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 282.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 280.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 280.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 278.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 276.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 275.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 275.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 270.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 264.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 263.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 260.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 260.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 257.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 253.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 252.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 251.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 251.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 248.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 247.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 246.7
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 240.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 238.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 237.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 234.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 231.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 230.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 229.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 227.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 227.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 226.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 225.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 224.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 222.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 222.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 221.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 218.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 218.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 217.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 216.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 216.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 206.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 206.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 203.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 202.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 199.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 198.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 198.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 196.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 195.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 195.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 195.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 194.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 192.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 191.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 191.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 190.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 188.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 187.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 186.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 185.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 184.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 181.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 181.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 180.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 179.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 179.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 177.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 175.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 175.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 175.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 174.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 174.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 173.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 173.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 171.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 169.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 168.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 168.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 165.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 162.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 161.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 159.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 159.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 159.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 158.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 156.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 155.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 155.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 152.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 152.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 151.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 150.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 149.2
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 145.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 144.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 143.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 140.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 139.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 137.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 137.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 135.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 135.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 134.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 130.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 130.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 129.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 124.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 124.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 124.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 123.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 121.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 121.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 118.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 113.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 108.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 105.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 103.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 103.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 100.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 96.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 94.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 86.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 84.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 84.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 83.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 82.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 81.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 79.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 78.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 71.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 70.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 69.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 61.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 59.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 51.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 51.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 47.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 42.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 39.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 38.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 35.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 35.0
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

445.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 445.9
FF:10176-103C5 60 years, female 445.9

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.2
Macaque sample Sample description nTPM
Putamen
nTPM: 57.2
Samples: 2

Max nTPM: 58.6
Min nTPM: 55.8
Sample A 58.6
Sample B 55.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.6
Pig sample Sample description nTPM
Putamen
nTPM: 172.6
Samples: 3

Max nTPM: 190.5
Min nTPM: 152.9
Sample B Female 152.9
Sample C Male 190.5
Sample D Male 174.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.