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  • SUMMARY

  • TISSUE

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  • TNK2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:84.6 nTPM
HPA Brain:121.1 nTPM
GTEx:84.6 nTPM
Pig:54.7 nTPM
Mouse:79.6 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

121.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 96.7
1961 Female, age 42, unknown 108.4
2226 Male, age 75, left hemisphere 85.0
Dorsomedial nucleus
nTPM: 121.1
2017 Female, age 42, unknown 131.1
1989 Male, age 62, unknown 122.2
2041 Female, age 72, unknown 109.8
Lateral hypothalamic area
nTPM: 109.0
2412 Male, age 62, unknown 150.6
1791 Male, age 80, right hemisphere 105.3
2228 Male, age 66, unknown 90.7
2271 Male, age 75, both hemispheres 89.2
Mammillary body
nTPM: 115.0
2413 Male, age 66, unknown 140.0
1834 Female, age 42, unknown 112.6
1923 Female, age 72, unknown 112.5
1948 Female, age 72, unknown 107.6
1945 Male, age 80, right hemisphere 102.5
Paraventricular nucleus
nTPM: 120.3
2700 Male, age 62, unknown 120.3
Preoptic area
nTPM: 117.7
1861 Female, age 42, unknown 135.6
1907 Male, age 80, right hemisphere 109.4
2414 Female, age 72, unknown 108.3
Supraoptic nucleus
nTPM: 90.3
2835 Female, age 72, unknown 115.2
2043 Male, age 62, unknown 85.2
1894 Female, age 72, unknown 70.6
Ventromedial nucleus
nTPM: 108.7
1982 Female, age 72, unknown 114.7
1822 Female, age 42, unknown 102.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 84.6
Samples: 257

Max nTPM: 166.6
Min nTPM: 30.8
Std nTPM: 25.3
Median nTPM: 81.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 166.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 166.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 157.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 148.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 147.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 145.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 144.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 143.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 139.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 139.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 136.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 134.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 133.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 133.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 133.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 129.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 127.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 127.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 125.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 123.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 123.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 122.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 121.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 120.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 119.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 118.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 118.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 117.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 116.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 115.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 112.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 112.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 110.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 110.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 109.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 109.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 109.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 108.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 108.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 108.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 107.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 107.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 106.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 106.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 105.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 105.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 105.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 105.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 104.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 104.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 104.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 104.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 103.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 101.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 101.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 101.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 100.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 100.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 100.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 100.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 100.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 100.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 99.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 99.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 99.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 99.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 98.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 97.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 97.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 97.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 97.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 97.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 97.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 96.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 96.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 95.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 95.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 95.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 95.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 95.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 94.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 94.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 94.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 94.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 94.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 94.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 93.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 93.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 93.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 93.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 93.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 92.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 92.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 92.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 91.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 91.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 91.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 91.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 90.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 89.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 89.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 89.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 89.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 88.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 88.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 88.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 87.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 87.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 87.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 87.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 87.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 87.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 87.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 87.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 86.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 86.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 85.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 85.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 85.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 85.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 85.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 85.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 85.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 84.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 83.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 83.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 82.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 82.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 81.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 81.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 81.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 81.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 81.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 81.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 81.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 81.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 80.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 80.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 80.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 79.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 79.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 79.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 78.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 78.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 78.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 78.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 77.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 77.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 76.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 76.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 76.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 76.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 76.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 76.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 75.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 75.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 75.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 74.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 74.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 74.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 74.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 73.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 73.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 73.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 73.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 73.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 73.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 72.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 72.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 71.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 71.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 71.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 71.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 70.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 70.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 70.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 70.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 70.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 69.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 69.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 69.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 68.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 68.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 68.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 67.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 67.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 66.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 66.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 66.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 66.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 66.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 66.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 66.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 65.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 65.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 65.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 64.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 64.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 64.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 64.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 64.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 64.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 64.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 64.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 64.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 63.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 63.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 62.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 62.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 61.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 61.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 60.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 60.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 60.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 60.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 59.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 59.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 59.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 58.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 58.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 57.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 57.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 57.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 56.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 56.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 56.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 56.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 56.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 55.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 54.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 54.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 53.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 52.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 52.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 52.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 51.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 51.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 51.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 50.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 50.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 50.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 50.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 50.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 49.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 47.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 47.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 45.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 44.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 44.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 43.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 43.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 42.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 39.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 39.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 38.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 38.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 30.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 54.7
Samples: 4

Max nTPM: 69.5
Min nTPM: 38.3
Sample A Female 69.5
Sample B Female 56.4
Sample C Male 54.6
Sample D Male 38.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 79.6
Samples: 4

Max nTPM: 85.4
Min nTPM: 74.3
Sample A Male 79.9
Sample B Male 78.6
Sample C Female 85.4
Sample D Female 74.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
74056144 Antisense, RP_051019_03_E12, Mouse strain C57BL/6J (56 days, male) 0.2

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