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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • NDUFB4
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:80.5 nTPM
GTEx:194.3 nTPM
FANTOM5:233.1 Scaled Tags Per Million
Macaque:208.8 nTPM
Pig:220.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.5
Sample id Sample description nTPM
Putamen
nTPM: 80.5
2466 Female, age 79, unknown 102.4
1838 Male, age 80, right hemisphere 101.8
2482 Female, age 94, left hemisphere 95.8
1937 Female, age 91, right hemisphere 84.1
1829 Male, age 74, unknown 80.6
2489 Female, age 72, unknown 50.6
2647 Male, age 75, left hemisphere 48.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 194.3
Samples: 254

Max nTPM: 367.9
Min nTPM: 117.5
Std nTPM: 41.1
Median nTPM: 187.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 367.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 343.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 321.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 320.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 302.8
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 302.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 299.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 299.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 293.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 289.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 287.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 270.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 270.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 269.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 264.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 262.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 262.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 261.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 259.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 258.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 257.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 257.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 256.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 255.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 255.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 245.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 244.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 241.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 240.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 239.1
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 237.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 237.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 236.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 236.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 236.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 235.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 235.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 234.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 233.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 233.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 233.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 231.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 231.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 228.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 225.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 225.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 224.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 223.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 223.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 222.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 221.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 221.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 220.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 218.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 218.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 217.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 217.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 217.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 216.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 215.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 215.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 214.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 213.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 213.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 212.3
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 210.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 210.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 210.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 210.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 210.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 210.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 210.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 209.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 209.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 208.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 208.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 207.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 207.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 206.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 206.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 206.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 205.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 205.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 205.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 204.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 203.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 203.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 203.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 203.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 202.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 202.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 201.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 201.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 200.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 200.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 200.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 200.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 199.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 199.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 199.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 199.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 198.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 198.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 197.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 196.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 196.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 196.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 195.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 195.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 194.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 194.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 193.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 193.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 193.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 192.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 192.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 191.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 190.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 190.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 190.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 189.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 189.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 188.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 188.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 188.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 188.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 187.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 186.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 186.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 186.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 186.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 186.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 185.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 185.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 185.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 185.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 184.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 184.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 184.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 183.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 183.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 183.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 183.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 182.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 182.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 182.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 181.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 181.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 180.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 180.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 180.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 180.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 179.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 179.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 179.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 178.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 178.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 177.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 177.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 177.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 177.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 177.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 177.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 176.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 176.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 175.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 175.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 175.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 175.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 175.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 174.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 174.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 174.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 173.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 173.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 172.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 172.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 172.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 172.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 172.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 171.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 171.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 171.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 170.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 170.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 169.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 169.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 168.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 168.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 167.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 167.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 167.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 165.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 164.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 164.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 164.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 163.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 163.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 162.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 161.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 161.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 159.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 159.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 159.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 159.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 158.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 158.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 157.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 156.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 155.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 155.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 155.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 154.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 153.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 153.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 152.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 152.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 151.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 151.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 151.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 151.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 150.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 150.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 150.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 150.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 149.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 149.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 149.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 149.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 147.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 146.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 146.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 145.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 145.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 144.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 143.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 142.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 142.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 141.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 141.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 140.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 139.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 138.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 138.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 138.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 137.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 136.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 132.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 131.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 130.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 129.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 125.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 118.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 117.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

233.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 233.1
FF:10176-103C5 60 years, female 233.1

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

208.8
Macaque sample Sample description nTPM
Putamen
nTPM: 208.8
Samples: 2

Max nTPM: 223.1
Min nTPM: 194.5
Sample A 194.5
Sample B 223.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

220.8
Pig sample Sample description nTPM
Putamen
nTPM: 220.8
Samples: 3

Max nTPM: 295.3
Min nTPM: 178.4
Sample B Female 178.4
Sample C Male 295.3
Sample D Male 188.6

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