BETA
PONS - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:71.4 nTPM
FANTOM5:154.2 Scaled Tags Per Million
Macaque:80.9 nTPM
Mouse:25.3 nTPM
Rat:33.8 nTPM
Pig:83.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

PONS - HPA Brain Stereo-seq

PONS - HPA Brain RNA-seq
Max subtype nTPMi 71.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 53.1
2188 Female, age 91, both hemispheres 71.5
2090 Male, age 80, both hemispheres 50.8
2301 Female, age 85, both hemispheres 50.7
1984 Male, age 76, both hemispheres 39.3
Dorsal cochlear nucleus
nTPM: 49.1
2802 Male, age 74, right hemisphere 60.1
2187 Female, age 91, both hemispheres 51.9
2378 Male, age 80, both hemispheres 51.0
2058 Male, age 76, both hemispheres 43.5
2370 Male, age 61, both hemispheres 38.8
Dorsal tegmental nucleus
nTPM: 42.9
2326 Male, age 74, both hemispheres 49.3
1936 Male, age 76, left hemisphere 48.4
2083 Male, age 80, both hemispheres 43.5
2358 Male, age 61, both hemispheres 30.4
Dorsolateral tegmental area
nTPM: 41.2
2751 Female, age 85, both hemispheres 58.6
2360 Male, age 74, both hemispheres 43.5
2654 Male, age 80, both hemispheres 43.3
2141 Male, age 76, both hemispheres 41.4
2337 Male, age 61, both hemispheres 19.2
Kolliker-Fuse nucleus
nTPM: 48.1
2793 Female, age 91, left hemisphere 55.3
2163 Male, age 80, both hemispheres 45.1
2315 Male, age 76, right hemisphere 43.9
Lateral lemniscal nuclei
nTPM: 58.3
2036 Male, age 80, both hemispheres 70.7
2453 Male, age 74, right hemisphere 65.9
2169 Male, age 76, both hemispheres 55.7
2320 Female, age 91, left hemisphere 55.2
2746 Female, age 85, left hemisphere 44.1
Lateral parabrachial nucleus
nTPM: 49.6
2792 Male, age 76, both hemispheres 51.2
2013 Male, age 80, both hemispheres 50.7
2790 Male, age 61, both hemispheres 50.5
2139 Female, age 85, right hemisphere 46.1
Lateral vestibular nucleus
nTPM: 47.6
2311 Male, age 80, both hemispheres 53.8
2184 Male, age 76, both hemispheres 41.3
Locus coeruleus
nTPM: 71.4
2123 Female, age 91, both hemispheres 89.7
2014 Male, age 55, unknown 85.4
2720 Male, age 74, both hemispheres 74.5
2788 Male, age 74, unknown 70.1
2317 Female, age 72, unknown 65.0
1980 Male, age 76, both hemispheres 57.9
2162 Male, age 80, both hemispheres 57.4
Medial parabrachial nucleus
nTPM: 47.9
2854 Male, age 80, both hemispheres 55.1
2170 Female, age 91, both hemispheres 54.5
2463 Female, age 85, right hemisphere 46.6
2786 Male, age 76, both hemispheres 44.2
2156 Male, age 61, both hemispheres 39.0
Medial periolivary nuclei
nTPM: 56.8
2791 Male, age 74, right hemisphere 90.6
2171 Female, age 85, both hemispheres 56.5
2063 Male, age 76, both hemispheres 52.3
2458 Female, age 91, both hemispheres 48.6
2081 Male, age 80, both hemispheres 36.3
Motor facial nucleus
nTPM: 60.8
2365 Male, age 74, right hemisphere 79.8
2795 Female, age 91, both hemispheres 76.0
2327 Male, age 80, both hemispheres 57.3
2062 Male, age 76, both hemispheres 55.3
2126 Male, age 61, both hemispheres 49.3
2697 Female, age 85, both hemispheres 47.3
Motor trigeminal nucleus
nTPM: 47.1
2560 Male, age 74, both hemispheres 65.3
2079 Male, age 80, both hemispheres 53.5
2321 Female, age 91, both hemispheres 43.8
2309 Male, age 76, both hemispheres 39.1
2335 Male, age 61, both hemispheres 33.7
Nuclei of the trapezoid body
nTPM: 68.7
2159 Male, age 61, both hemispheres 95.1
2735 Female, age 85, both hemispheres 72.2
2368 Female, age 91, both hemispheres 69.4
1983 Male, age 76, both hemispheres 56.6
2166 Male, age 80, both hemispheres 50.3
Nucleus raphe magnus
nTPM: 65.7
2160 Male, age 61, both hemispheres 111.1
2455 Male, age 74, both hemispheres 78.4
2328 Male, age 80, both hemispheres 57.2
2172 Female, age 85, both hemispheres 56.3
2459 Female, age 91, both hemispheres 56.2
2051 Male, age 76, both hemispheres 34.9
Paramedian reticular nucleus
nTPM: 66.8
2313 Male, age 61, both hemispheres 72.7
2057 Male, age 80, both hemispheres 65.9
2052 Male, age 76, both hemispheres 64.4
2050 Female, age 85, both hemispheres 64.3
Pedunculopontine tegmental nucleus
nTPM: 48.1
2334 Male, age 80, both hemispheres 58.5
1921 Female, age 85, both hemispheres 52.0
2338 Male, age 61, both hemispheres 33.9
Pontine nuclei
nTPM: 63.2
2727 Male, age 61, right hemisphere 113.4
1863 Male, age 55, unknown 75.0
2454 Male, age 74, left hemisphere 60.6
2787 Female, age 85, both hemispheres 60.1
2319 Female, age 91, both hemispheres 60.0
2109 Female, age 72, unknown 56.1
1968 Male, age 76, left hemisphere 48.4
2115 Male, age 80, left hemisphere 31.9
Pontine raphe nucleus
nTPM: 58.8
2122 Female, age 85, midline 68.3
2853 Male, age 76, midline 49.3
Posteroventral cochlear nucleus
nTPM: 56.7
2341 Male, age 80, both hemispheres 78.2
2135 Female, age 91, both hemispheres 59.4
2752 Female, age 85, both hemispheres 54.4
2070 Male, age 76, both hemispheres 51.6
2371 Male, age 61, both hemispheres 39.8
Principal sensory trigeminal nucleus
nTPM: 61.2
2158 Male, age 61, both hemispheres 88.0
2008 Male, age 80, left hemisphere 70.8
2367 Female, age 91, left hemisphere 46.9
2324 Male, age 76, both hemispheres 38.9
Reticular pontine nucleus, caudal
nTPM: 54.7
2457 Female, age 91, both hemispheres 65.7
2332 Male, age 80, right hemisphere 55.7
2092 Male, age 76, both hemispheres 50.8
2559 Male, age 74, both hemispheres 46.7
Reticular pontine nucleus, oral
nTPM: 54.9
2366 Female, age 91, both hemispheres 68.9
2012 Female, age 85, both hemispheres 60.4
1939 Male, age 80, both hemispheres 51.0
2361 Male, age 74, both hemispheres 50.2
2167 Male, age 76, both hemispheres 44.1
Reticulotegmental nucleus
nTPM: 48.3
2322 Female, age 91, both hemispheres 55.0
2333 Male, age 80, both hemispheres 47.7
2325 Male, age 76, both hemispheres 45.4
2452 Male, age 74, both hemispheres 44.9
Spinal trigeminal nucleus, oral
nTPM: 46.9
2737 Female, age 85, both hemispheres 52.9
2164 Male, age 80, both hemispheres 48.6
1978 Male, age 76, both hemispheres 39.3
Subcoeruleus area
nTPM: 53.0
2323 Female, age 91, left hemisphere 60.2
1958 Male, age 80, both hemispheres 58.1
2369 Female, age 85, left hemisphere 55.1
2089 Male, age 76, left hemisphere 47.7
2451 Male, age 74, both hemispheres 43.9
Superior olive
nTPM: 63.9
2364 Male, age 74, right hemisphere 94.1
1875 Female, age 85, both hemispheres 74.9
2020 Male, age 76, both hemispheres 56.2
2329 Male, age 80, right hemisphere 49.4
2561 Female, age 91, both hemispheres 44.8
Ventral periolivary nuclei
nTPM: 60.8
2023 Male, age 76, both hemispheres 64.3
2165 Male, age 80, both hemispheres 64.1
2130 Female, age 85, both hemispheres 61.7
2794 Female, age 91, left hemisphere 52.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 55.0
2449 Male, age 74, both hemispheres 64.2
2456 Female, age 91, both hemispheres 58.9
2840 Female, age 85, both hemispheres 55.1
1959 Male, age 76, both hemispheres 53.8
2161 Male, age 80, both hemispheres 50.3
2359 Male, age 61, both hemispheres 47.9

PONS - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 154.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 61.2
FF:10165-103B3 76 years, female 62.8
FF:10182-103D2 60 years, female 59.6
Pons
Scaled Tags Per Million: 154.2
FF:10033-101E6 18-54 years, mixed 154.2

PONS - Macaque RNA-seq
Max subtype nTPMi 80.9
Macaque sample Sample description nTPM
Pons
nTPM: 80.9
Samples: 2

Max nTPM: 94.9
Min nTPM: 66.9
Sample A 94.9
Sample B 66.9

PONS - Pig RNA-seqi
Max subtype nTPMi 83.8
Pig sample Sample description nTPM
Pons
nTPM: 83.8
Samples: 3

Max nTPM: 106.1
Min nTPM: 65.5
Sample A Female 65.5
Sample B Female 79.9
Sample C Male 106.1

PONS - Mouse RNA-seqi
Max subtype nTPMi 25.3
Mouse sample Sample description nTPM
Pons
nTPM: 25.3
Samples: 4

Max nTPM: 29.1
Min nTPM: 19.3
Sample A 29.1
Sample B 19.3
Sample C 28.0
Sample D 24.9

PONS - Rat RNA-seq
Max subtype nTPMi 33.8
Rat sample Sample description nTPM
Pons
nTPM: 33.8
Samples: 4

Max nTPM: 37.8
Min nTPM: 28.9
Sample A 28.9
Sample A 33.0
Sample A 37.8
Sample A 35.7

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo